Oncorhynchus masou masou (cherry salmon): 135514789
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Entry
135514789 CDS
T10723
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
135514789
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135514789
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
135514789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
135514789
NCBI-ProteinID:
XP_064794465
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All DBs
Position
26:complement(10885360..10941155)
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AA seq
515 aa
AA seq
DB search
MDDDFERRRELRRQKREEMRLEAERMAFQGSNEDEEEAARERRRRARQERMRGMGGEEPS
DSVVMTNSHSVTETVSVSSSSVTSSGGGDDDEQALLERMAKREERRQKRMMEALEREKDQ
NPGNASNHGSGENSVDERSVGRRGRYQDNEEEVEEGKAAPEEEEAEQGEEEEEEEVVEEE
KPRRSYMREQESIDEKTRNEVNEKQNGRLHEETPPKHKKTERTLSVRSLEAGAEEEQDDA
ANLEAERKLEELKRRRGDAESEEFERMRRKQQEAEQELEELKKKREERRKIIEEEERQKK
QEEAEKKDREEEEKRRMKEEIERRRAEAAEKRQQMGVETVDGEAKPFKCFSPRGSSLKIG
ERAEFLNKSAQKSTVKTSHSPVVSKIDNRLEQYTSVAQNKDMRSPRSGAVDLPMVTDGIR
NIKTMWEKGNVFNSPGGGGGTHKEAAGMKIGVAGRINDWLNKTPESKTPGGRPADLKPGD
VTNKRSLWENKGSSPAKVTGRGENKSVANAGMGHE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgactttgagcggcgcagagagctcaggaggcagaagagggaggagatgcgc
ctggaggctgaacggatggccttccagggtagtaatgaggatgaggaggaggctgcaagg
gagcgaagacgcagggcacgtcaggagaggatgagagggatgggaggcgaggagcccagt
gacagcgtggtgatgaccaacagccacagtgtaaccgagactgtgtcggtgtcctcctcc
tctgtgacctcctcgggtggaggagacgatgatgagcaggccctgctggagcgcatggcc
aaacgagaggagcgcaggcagaaaaggatgatggaagctctggagcgagagaaggatcag
aaccccggcaatgccagtaaccacggcagcggggagaatagtgtggatgagaggtccgtc
ggccgcaggggccgttaccaagacaacgaagaagaggtggaagaggggaaggctgctccg
gaggaggaagaggctgagcaaggagaggaagaagaggaggaagaggtggtggaggaggag
aaaccgagacgatcctatatgagagaacaggaatccattgacgagaaaactagaaacgag
gtgaatgaaaagcagaatggacgtctgcacgaggagactcctccaaaacacaaaaaaaca
gaaaggaccctgagcgtgcgctctctggaggcgggggcggaggaggagcaggacgacgcg
gcgaacctggaggcggagcgtaagctggaggagctgaaacggcgccgtggcgatgcggag
agcgaggagttcgagaggatgagacggaagcagcaggaggctgagcaggagctggaggag
ctgaagaagaagagggaggagaggaggaagatcatagaagaggaggagagacagaagaaa
caggaggaggccgagaagaaggacagagaggaggaggagaagaggaggatgaaggaggag
atagagaggaggagggcggaggcggccgagaagagacagcagatgggggtggagactgtc
gacggagaggccaaacccttcaaatgcttcagccccagaggatcctccctcaagattggt
gaaagggcagagtttctgaacaagtcggcacagaaaagcacggtgaagacgtctcactct
cctgtcgtctctaagattgacaacagactggagcagtacacctctgttgcgcagaacaag
gatatgcggtccccgcgctccggtgccgtggacctgccaatggtgacagatgggatacgt
aacatcaagaccatgtgggagaaaggcaacgtgttcaactcacccgggggcggcgggggc
acgcacaaggaagcagctgggatgaagataggtgtggcgggccgcatcaacgactggctg
aataaaacccccgagagcaaaacgccgggaggaaggcccgcggatctgaagccaggagat
gtgactaacaagagaagtctgtgggaaaacaagggatcctccccagccaaggtgactggt
agaggggagaataaatctgttgccaatgcaggtatgggacacgaatga
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