Oncorhynchus masou masou (cherry salmon): 135514833
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Entry
135514833 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: partitioning defective 3 homolog
KO
K04237
partitioning defective protein 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04144
Endocytosis
omm04517
IgSF CAM signaling
omm04520
Adherens junction
omm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135514833
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135514833
09144 Cellular community - eukaryotes
04520 Adherens junction
135514833
04530 Tight junction
135514833
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135514833
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135514833
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Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
135514833
NCBI-ProteinID:
XP_064794557
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All DBs
Position
3:32534898..32784983
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AA seq
1395 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHTLIQQAVMRYKKAIAKDASYWLQVHRLEHGDGGILD
LDDLLSDVADDKDRLVAVYDEQDPHHGGDGTSSTGTQSPDLFATELNSSNMSAFQPYQAA
SEIEVTPSALRSNMPLHVRRSSDPALATINGPFSDPRVTLPPEKPSRKNPTRWSTTAGFL
KPRRSVGGTGTGTNSLERKGNGPDTYRSLPRDAGTCGNQREFQRETARSSLSANHPMVDR
WLERREQDEEEENSRIEPIGRADSCMDHTPLRSLDDIVKLVEVSNDGGPLGIHVVPFSAR
DRRTLGLLVKRLERGGKAQEQGLFQENDCIVRINNGDLRNIHFEQAQNMFRQAMRSPVIM
FHVVPNLMKAQYEQLSHSERNPNVAYSSGRFSPDSLASERGSTTSGLDHTPQSRGPHPHP
HPEQGDAYTPLPHPHGGSMGKPPSGHAPSPHRMLNSTPTAGFTKKVGRRLNIQLKKGPEG
LGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLVGRTQEEVVAL
LRATPMGGAVGLVVLRQEETFLNAEPQMQSPRDLRRSVREAVSATEPHWLTEKVEEDDLV
LTPDGTREFLTFEIPLSDSGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAACKDRRLR
VNDQLIAVNGESLIGKTNQEAMETLRKSMSVEGNKRGTIQLIVARRVTKRSELEAPGSPL
GPEQTLLNSSLLDDRERRISHSLYGGIEGLDDNLMPQQALMGRMMGNYQLSPTVNMPQDD
TVIIEDDRXPVLPAHLSDQSSSSSHDDMGFHVEVPPTWAKDTPIQNESTLSPDDTNPDGA
FQREGFGRQSMSEKRTKQFGDASQLEIIKTRKSKSMDLVADEINLTPRKENTAGSSTRDV
GPSLGLKKSSSLESLQTAVAEVTLNGDMPFHRPRPRIIRGRGCNESFRAAIDKSYDRPAA
TEEDDEGMETLEEDTEESSRSGRDSVSTVADLTPLPNTERPLANGNRANEDKKKDKGGKD
KKKPDRDKEKDSKNRAKKGMLKGLGDMFRFGKHRKDGEKLERKGRLEELQASEEETLRMK
LEQERIQAKTRELRERQARERDYAEILDVNLSRDEEHPYAGIGPLDTSLDSGHSRPQSPR
DNHHQDSSLYTQVGKTRNANGRPPSADSNRLAPSNHDRIQRLRHEFQQARGDDDPDDRRR
TYSFEQPWPNNTNTGPSPYQTDGQQTGRHSVSVEVQRQRQRQEERDAFQQAQRQYSSLPR
QPRKNPSSISQDSWDKVYPPGDGFQTAKENPRYSSYKGSRNGYPGMSGVNARVLLEAQEL
LRQEQRRREQEAKGKQLLLAPTQEHPGNNTYDGYSAHKDPVSPKGPYRQDVPPSPSQLAR
LNKLQGPEKGRPFYS
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgttttggaaggactagggtggtggtaccgtgcggagatggaaat
atcaaagtccatactctcatccagcaagccgtcatgagatacaaaaaagccattgcaaag
gatgccagctactggttacaggtgcaccggttggagcatggggacggaggtattctcgac
ctggatgacttgctgtctgatgtggctgatgacaaagaccggctggtggctgtgtatgat
gaacaggaccctcaccatggaggcgacggcaccagctccacgggaacccagagccccgac
ctgttcgccacagagctcaactccagcaacatgtccgctttccagccctaccaggccgcc
agcgagatagaggtcactccgtccgcccttcgatccaatatgcccctccatgtgcgtcgc
agcagtgacccggccctggcgacgatcaacgggccgttcagcgacccccgcgtgaccctg
ccgccagagaaaccgtccaggaagaaccccacccgctggtccaccacggctggcttcctc
aaaccacggcgctctgtaggaggcaccggcactggcaccaacagcctggagagaaagggt
aatggtccggacacgtaccgtagtctcccccgggatgcaggcacgtgtggcaaccagaga
gagttccagagagagacggcccgctcctccttgagcgccaaccaccccatggtagaccgc
tggctggagagacgggagcaggatgaggaggaggagaacagcaggatcgagccgattggc
cgagctgattcctgtatggaccacacccctctgaggtccctagatgacattgtaaagctg
gtagaagtctccaatgatggcgggcccttggggatccatgtagtacctttcagtgcccgg
gaccgcaggactctaggcctgttggtcaagcgcctggagaggggaggcaaggcgcaggag
cagggtctgttccaggagaacgactgcatcgtacgcattaataatggagacctgcggaac
atccattttgaacaagcccagaacatgttccgccaggccatgcgttccccagtcatcatg
ttccacgtcgttcccaacctgatgaaggcccagtacgagcagctgtcacacagcgagagg
aaccccaacgtggcctactcctctggacgcttcagccccgactccctagctagcgagaga
ggcagcaccacctcaggcctagaccacaccccacagtcccggggtccccacccccaccct
cacccggagcagggagacgcatacactcctctaccccacccccatgggggctccatgggc
aagcccccatccggccacgccccctccccgcacaggatgctaaactcaacccccacggcg
ggcttcaccaaaaaggttggcaggagactcaacatccagctcaagaaaggtccagagggt
ctgggtttcagcatcacttcgcgcgacgtccccatcggcggctcggcgcccatctacgtg
aagaacatcctgccccgaggagctgccatccaggacggacgcctcaaggctggagacagg
ctgctggaggtgaatggagtggacttggttggtcggacccaggaggaagtggtcgctctg
ctgagggccacgcctatgggaggagctgtggggctggtggtgctacgtcaggaggagacc
ttcctgaatgcagagccccagatgcaaagccccagagatttgcgtcgctccgtgagggag
gccgtgtcggccacggagccccactggctgactgagaaggttgaggaggatgacctggtg
ttgacccctgacggtaccagggagttcctgacctttgagatccctctgagtgactcggga
tcggccgggttaggggtcagcgtcaagggcaaccgctccaaggagaaccatgctgaccta
ggcatcttcgtcaagtccataatcaatggaggagctgcctgcaaggatagacggctgcgg
gtcaacgaccagctgatagcggtgaacggcgagtcattgataggcaagaccaaccaggag
gccatggagacgctaaggaagtccatgtcggtggagggcaacaaacgcgggacgattcag
ctgatagtggccaggagggtcaccaaacgcagtgagctggaggcccctgggagccccctg
ggaccggagcagaccctcctgaactcctccctgctggacgaccgggagcgtcgtatctcc
cactccctgtacggaggcatagagggcctggacgacaacctgatgccacagcaggctctg
atgggcaggatgatgggtaactaccagctctccccaacggtcaacatgccccaggacgac
actgtcatcattgaagacgatcgcncccctgtacttcctgcccacctctctgaccaatcg
tcttccagttcccatgacgacatggggttccatgtggaagtccctccaacttgggccaaa
gatactccaattcagaatgagagcaccctgagccctgatgacaccaacccagatggagcc
tttcagagggagggtttcggcagacagagcatgtcagagaaacggacaaagcagtttgga
gatgccagtcagctggaaatcatcaagacacgcaagtccaagagcatggatctagtagcc
gacgagattaacctcacccctcgcaaagagaacacagcagggtcttccaccagggacgtg
ggtccctcccttggcctcaagaagtccagctctctggagagtttacagaccgccgttgcc
gaggtgacgctcaacggtgacatgcccttccacaggccacgcccacgcataatcaggggg
cggggctgtaacgagagcttccgggctgctattgacaagtcttacgacaggccagcagcc
accgaggaggacgacgagggcatggagacattggaggaggacaccgaggagagctctcgg
tccgggcgcgactccgtgtccactgtagcagatctgaccccactgcccaacacagagaga
ccgctggccaacggcaaccgcgccaatgaagacaagaagaaggacaaaggagggaaggac
aaaaagaagccagaccgggacaaagagaaggacagcaagaacagagctaagaaaggcatg
ctgaaaggactgggcgacatgttcaggtttggaaaacaccgcaaggacggagagaaacta
gagcgcaaagggaggctggaggagctgcaagcctcagaagaagagacactgaggatgaaa
ctagaacaggagaggatccaggctaagacccgggagctgcgggagcgccaggcacgggag
agggactatgctgagatcctagatgtcaacctgagccgagacgaggagcacccctacgca
ggcatcgggcccctggacacgtccctggacagcgggcacagccggccccagagcccccga
gacaaccaccatcaagattcctccctgtacacacaagtcggcaaaacccgcaatgcaaat
ggacgccctccctccgctgacagcaacagactagcgcctagcaaccacgaccggatacag
cggctgagacacgagttccagcaggccaggggagacgacgaccctgacgaccggagacgc
acctacagcttcgagcagccctggcccaacaacaccaacacaggcccaagcccgtaccag
acagacggacaacagacaggccgacactctgtgtctgtagaggtgcagagacagagacag
aggcaggaggagagagacgccttccaacaggcgcagagacagtacagctccctgccacgg
caacccaggaagaaccccagctccatctcgcaggactcctgggacaaggtctacccgccg
ggtgatggcttccagacggccaaggagaaccctcgctactctagctacaagggttccaga
aacggctacccggggatgagcggcgtgaatgcccgcgtcctcctggaggcccaggagctg
ctgaggcaggagcagagacgcagggagcaggaggccaaagggaagcagctactgctagcg
cccacgcaggaacaccccgggaacaacacctatgacggttactcggctcacaaggaccct
gtgtcgcctaagggcccctatagacaggacgtacccccctcgccctcccagctggccagg
ctcaacaagctgcaggggcccgagaagggaaggcccttctactcctga
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integrated database retrieval system
