Oncorhynchus masou masou (cherry salmon): 135515052
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Entry
135515052 CDS
T10723
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omm03009
]
135515052
Ribosome biogenesis [BR:
omm03009
]
Eukaryotic type
90S particles
Other 90S particles
135515052
Pre-60S particles
Other pre-60S particles
135515052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_RFWD3
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
WD_LRWD1
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_ACSF4
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
135515052
NCBI-ProteinID:
XP_064794934
LinkDB
All DBs
Position
26:complement(22679720..22685703)
Genome browser
AA seq
439 aa
AA seq
DB search
MASGQEQSDEAEAVQGQEPEQDENEAGREEADELAEYGLDRYDEEDSVTANLGDSLAGLT
VFSTNEEDPYITIKDTDQYEREDFQIKPNDNLVMSGRAEKDCCNLEIHVYNAEEESLYVH
HDILLPAYPLCVEWLNFDPSPEGTGNYAAVGNMTPQIDVWDLDVVDCLEPAFTLGSKKAS
KKKKKSKKAAAEPVESHTDAVLDLSWNKLVRNVLASGSADETVILWDLAQGKPATTLRRH
TDKVQTLMFHPFEAQTLISGSYDKSAILYDCRSPDSSHRTWRFSGQVERVAWNHFSPCNF
LASTEDGFVYCLDARSDKPVFTLRAHDGEVSGLDLSSQIRGCLVTSSADKHVKIWDILGN
KPNLIHTRDMKMGVLFCAACCPDMPFVYAFGGQRDGLRVWDISDVAAVAEVFGNRERLVA
TTVPEASSSTSSTADMELS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgggcaggaacagagtgacgaggcagaagctgttcagggacaggagccagag
caagatgaaaatgaagcaggaagggaggaagctgatgaactagcagagtatggtttggat
agatatgacgaggaagactcggtgactgccaaccttggtgacagccttgccggcctcaca
gtgttcagcaccaatgaggaggatccttacattaccatcaaagacacagaccagtatgag
cgagaggactttcaaatcaagcccaatgataacctcgtaatgtcaggcagagcagagaag
gactgctgcaacctggagattcacgtatacaatgctgaggaggaatccctctatgttcac
catgacatactcctgccagcctatccactgtgtgtggagtggcttaactttgaccctagt
ccagaaggcacaggcaattatgcggctgtaggcaacatgacaccgcagattgacgtgtgg
gacctggatgtggtggactgcctagagcctgccttcactctggggagcaagaaggcctcc
aagaagaaaaagaaaagcaaaaaggctgcagcagagccagtggaaagtcatacagacgct
gtactcgacttatcctggaacaaactggtccgcaacgtcttggccagtgggtcagccgac
gaaacagtgatcctgtgggatctggcacaaggaaagccggccacaacactgcgcagacac
actgacaaggtccagacgttgatgttccacccctttgaagctcagaccctgatatcagga
tcatacgataagtcggcaatcctgtatgactgccgcagcccggacagcagccatcgcact
tggaggtttagcgggcaggtggaaagggtcgcctggaaccacttctcgccctgcaacttc
ctggcgagcacagaggacggctttgtttactgtctggacgcgcgctcggacaagccagtg
tttacactaagggcacatgacggagaggtgtcaggcttggaccttagcagccagatcagg
ggatgcttggtcacctcgtcagcagacaaacacgtcaagatttgggacatcttggggaac
aagcccaatctgattcacacccgggacatgaaaatgggggtgctgttctgtgcagcgtgc
tgtcctgacatgccctttgtatatgcatttggaggacagagggatggcctgcgggtttgg
gacataagtgatgtagcagcagtcgctgaggtgtttggcaatcgggagcggttggtggca
accacagtgcctgaggcatccagcagcacttcctccacagcagatatggagctttcctag
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