Oncorhynchus masou masou (cherry salmon): 135515085
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Entry
135515085 CDS
T10723
Symbol
si:dkey-159a18.1
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
135515085 (si:dkey-159a18.1)
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GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
DUF4245
Motif
Other DBs
NCBI-GeneID:
135515085
NCBI-ProteinID:
XP_064794989
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Position
26:complement(24241296..24263841)
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AA seq
931 aa
AA seq
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MTRQTCLSAPIHSSATLVICHLKRQAVLVCNTRPELWDLGFYRYLAHHIKMTWRLLVLGG
ACLLLLGVRGQCKEQRNRRTVSFHQTQQDGDQRQVLSRPERDTTASPRPTFTACKLPLTP
LEHRVLDQNTHETGFHGDDGSSFTVTWVGDGTGVILVLSTISAPLDSFFEGGSSRLYRSA
DYGKSFHDISHLINNTFIRKEFGLLAGPGNSQQVILTADTPVLDNPGGVIFTSTDAGVSF
KSVHLPFHPAQPITFHFLNPEYLVVISIDGGLWLSLDFGTVWKKVHEGTQSFTWGSGITL
FFSFSPKGTVEADRRGELFLKRTEDLGKTFTTVAHSIFSFGYVGGFLFTSVIETLGAPRV
IYVSSDQGDQFNKAQLPSASTEQFYSVLDGDEDMIFMHVDNPGEESYFGTVYTSDDRGIL
YSKSLERHLFGGEGKSDFTNVTSMRGVYLTNILEEDGRIRTVISFNRGGQWTLLNKPQNV
ECGEDSRNDCNLHIHGEYSRYNGITPMLPLSDPTAVGLVIAHGSVGDSISSTRPDVYVSE
DGGYKWRGSLRGPHHYSILDAGGLVVAVEAHPMDGQINTIKFSTDEGQCWKVYNFTEQPI
FFAGLTSEPGTKTMNISVWGYRPEEDHQPMWVVVTIDFQSLLTRECGNQDYVQWLAHATE
GGDLATEGCVLGYKETFRRLRKLSVCRNGRDYVVSRQKSPCPCTREDYLCDYGYYRHENS
SECMRQLDTADHALEVCLNGEEGELRTTGYRKVSSDKCEGGFTPLRIKETVNRHCGNSSQ
PPTASPYSETPREKMLLIVVCVGSGIVILVAVAAAVYTVRRMGYGNRFRTTTAPLPPTQR
VSPVATEHQSSQWIQMMILLNEQHEIKYLDEDLQSLAIWMYDIPLVVLRTCCISMERCLG
FVRNKLQMSCRWYADVPRYLLSEEHFPLDTG
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtcaaacatgtctctccgcccccatccattcaagtgcgacacttgtcatttgt
cacctgaagcgacaggcagtgctagtctgtaatacccgacccgaactgtgggatttagga
ttttaccgttatttagcccaccacatcaaaatgacttggagacttttggtcctcgggggg
gcatgcttgcttcttctgggtgtgaggggtcagtgcaaagagcaacgaaacaggagaacg
gtgtctttccatcagactcagcaagatggggaccaacgccaagtcctctcacggccagaa
agggataccacagcttctccaagacccactttcaccgcttgtaaactccctctcacacca
ttagaacaccgggtgttggatcaaaatacacacgagacagggtttcatggtgacgatggc
tccagttttactgtcacatgggttggagacgggacaggggtaatcttggtgttgtctaca
atcagtgctcctctagattccttcttcgagggcggttcttcacgattgtaccgcagtgca
gactatggcaagtctttccatgatatttctcatctcatcaacaacaccttcataaggaag
gaatttggacttctggctggaccagggaactctcagcaggtgattctgactgcagacaca
ccggttttggacaaccccggtggcgtcatctttacttcaactgacgccggagtgtcgttt
aagtctgtccatctgccttttcacccggcccagccaatcaccttccacttcttgaatccc
gagtacttagtggtcatcagcatagatggtggcctgtggctttctctggactttgggact
gtgtggaaaaaggttcacgaaggaacacaatccttcacgtggggctccggcatcactctc
ttcttcagcttcagtcccaaaggaacagtggaggcagacagaagaggagagctgttccta
aagaggacagaagacctggggaagacgttcaccaccgtggcacacagcatcttctccttc
ggctatgtaggaggcttcctcttcacctcagtcatagagacactgggagccccacgtgtc
atctatgtgtcctcagaccaaggggaccaattcaacaaggcccagctcccctccgcctcc
actgagcagttctactcggttctggatggggatgaggacatgatcttcatgcatgtggac
aatccaggagaggagagctactttgggacggtgtacacatcagatgaccggggcatcctg
tactctaagtctctggagcgccacctgtttggtggggaagggaagagcgacttcaccaac
gtcacctccatgagaggagtgtacctcaccaacatactggaggaggacggccgcattcgg
acagtcatttcgtttaaccgagggggacagtggacactcctcaacaagccccagaatgtt
gagtgtggtgaggattcaagaaatgattgtaacttgcacatccacggtgaatacagtcgc
tacaacggcatcactcccatgctgcctctctctgaccccactgccgttggccttgtcatc
gcccacggcagtgtgggggactccatctcgtcaacacggcctgacgtgtacgtgtcggag
gacggggggtacaagtggaggggatccctgaggggccctcatcactacagcatcctggac
gctggggggctcgtcgtggctgtggaggcccaccccatggacggccaaatcaacaccatc
aagttctccacagatgaaggccagtgttggaaggtgtacaactttacagagcagcccatc
ttcttcgctggcctgacatccgagccgggcaccaagaccatgaacatcagcgtgtggggc
taccggcccgaggaagaccaccagcccatgtgggtggtggtcaccattgacttccagagt
ctcctcaccagagagtgtggtaaccaggactatgttcagtggttggcccatgccacagag
ggcggggacttggccacagaggggtgtgtcttgggctacaaggagaccttcaggaggctg
aggaagctgtccgtctgcaggaatggacgggactacgtggtgagcaggcagaaaagtccc
tgcccctgcaccagagaggactacctatgtgactatggttactatcgtcatgagaacagc
tcagagtgtatgagacaactggacactgcagaccacgccctggaggtgtgtctaaatgga
gaggagggggagcttaggacaacggggtaccgtaaggtttccagtgataagtgtgaggga
ggtttcactcccctgcgcataaaggagacagtcaacaggcattgtgggaactccagtcag
ccccccactgccagcccatattctgaaaccccgagagagaagatgctgttgatcgtagtt
tgtgttggatcagggattgtcattctggtggctgttgccgctgctgtctatactgtaagg
agaatgggctatggaaataggttcaggacgacgactgctccattgccgccgacccagaga
gtgtcgccagtagcaacggaacatcagtcttcccagtggattcagatgatgatcttattg
aatgaacaacatgagattaaatatcttgacgaggatctccagagcttggccatttggatg
tatgacattccacttgttgtattacgtacctgttgcatctcaatggaaagatgtctaggg
tttgtaaggaacaaattgcagatgtcatgtagatggtatgcagatgtcccaaggtattta
ttgagtgaagaacacttcccactggacactggttga
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