Oncorhynchus masou masou (cherry salmon): 135515515
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Entry
135515515 CDS
T10723
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm02010
ABC transporters
omm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135515515
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135515515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135515515
Transporters [BR:
omm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135515515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
135515515
NCBI-ProteinID:
XP_064795209
LinkDB
All DBs
Position
27:complement(46710716..46968008)
Genome browser
AA seq
2232 aa
AA seq
DB search
MQVRLVVELLWPLFLFLILVRVRSTNQPIYQGGCHYPNKAMPSSGLLPWLQGMMCNIGNP
CVNHPTPGEAPGQVNNFNNSIIAGMLIELQSLLANRSILTKFQRLSEDVDHWALIIQTSN
PANGQPIPLRSILNDNEMFTAYLKKNLSMPLTVVNSLMNSNIHRNEMMGISRQDDLRTTL
CNGTTLDRYVEFTSASDKEAFQNVSCSLPAQQMRRAKEVFLQNLNTSKILTNLPLDVNPA
ETFGLVGRTTEDALHVIDEVNKLQNSMLFKSANTLDFRADALGSLNMLLCGKAPDSNSRN
TTMNFSASGLMRNYTENSVLSDSRNRSSSAFCKILIDTIEGTPGLHVVWSMFRPLIQGKV
LYTPDTPATRLMVKEANSTFNALAMIKELPDAWEDFGHLVWDYFQNGRQVNTLRALLDNP
VFVALLNQRLKGTRWTAELLANFLYNGPPEGRPTGMPPNDWRNAFNTTSQILDLLKKFIG
CLNLDKFEAADSERHLMTRALELLESNRYWAGIVFEDLNPAASHPPPYVKYKIRMDIDKG
ERTNKIKERGWSPGARSNSFNDLRYIWGGFAYLQDMMDHGIIRAHTNKSQPLGVFAQQMP
YPCYVDDVFLRSLARSLPLYMTLAWIYSVAMIVKGIVMEKEARLKETVRMMGLRSSTYWL
SWAVSSMLPLAVSALLLTLILKYGKVLQYSDPSVIFVFMLVFCLATIMECFFISVFFSKA
NLAAACGGLIYFVLYLPHLLCYAWRDVLGFQVKIAVSLLSCVAFGYGCENFAKYEEQGIG
IQWSNIAQNPEGDRYSFIVSIIMMLIDALIYWLLTWYIENVFPGQYGIAKPWSFPFMASY
WCGMSAVPNADPSQFKDPMEYNDYLEKPPPNMKAGVSIRNLVKIYKTGKKLAVDGLSVDF
YENHITSFLGHNGAGKTTTMSILTGLFAPTSGTALINGYDIRTDMDTIRKHLGMCPQHNV
LFNDLTVEEHIYFYARLKGRSRDEVKTEMDQMIKDVGLPHKRKELAKNLSGGMQRKLSVA
IAFVGGSNIVILDEPTAGVDPYARRGIWELLLKYKKGRTIILSTHHMDEADILGDRIAII
SHGKMCCSGSSLFLKKYFGSGYYLTLVKAGNEQITNERSGVKQGQEKEETDETLRRTSLD
EGIASQNWSNSDPTELTAVSKLVRRHVPEAVFLESIGQEITYILPYRGAKDGTFALLFKE
LDLEMADIGFTSYGISDTTLEEIFLKVAEDTGVDVEIPDNKAPLVRDKTRSSRESKRQRQ
SLTNVGNTSDKVTGKRAEVKAKFTSRVEDVERVANVNGKGSSVIMGWELIRRQFLALFIK
RFHHARRSRKGIIAQVILPAVFVCLSLIFSVIIPPFAEYPNLELQPWMYGLPQTTFYSND
GPPNNTEVAQVVDSLVNNPGFGTRCMANNPIPNLPCVPIDSKWTTPSVEPSINNILINGT
WSMANPSPNCQCSTPQKTIMLPDCPPGAGGLPPSQRIQNTTDTLQDLTGRNMTDFLLKTY
EKAGKKRYGGISVGGVNSQVRMTEPEIEAVIRDLKSLFNSPQDNTTEQILLNAKTLLKEL
GTRDNVKVWFYNQAWHGIVSFLNVANNAILRGNLPTGRDPREYGISSSSHPLNLTKVQLS
YQALAATSTDLVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGVNPAVYWVANFA
WDICNYIVPCLIVIIIFLCFQQKAYVSPPNLPALIWLLVMYGWSITPMMYPASFIFSVPS
TAYVVLTCVNLFIGINGSLATFVMELFDDDKITHINDIVKQVLLIFPHFCLGRGLIDMGK
NQAMATLFERFGEDRFQDPLSWDMVGKNLCAMAIQGAVMFTITLLIQYKFCYKPRLISGK
SFSKEDEDVDVARERARVHEGGAENDLLRICDLSKVYSGKNIPAVDRVCLGVPAAECFGL
LGINGAGKTTTFKMLTGDIAVSGGEAFLNKYSVRTEMRDVHHNMGYCPQFDALNDLLTGR
EHLEFYARLRGVPEKEVTMVAEWGIQKLGLVKYSNKAAGTYSGGNKRKLSTAIALIGCPP
VVFLDEPTTGMDPKARRFLWDCILSVIKEERSVILTSHSMEECEALCTRMAIMVNGQFKC
LGSIQHLKSRFGDGYTVIVRVGGSPPALGPVEEFVHETFPGSILKEKHHNTLQYQLPLSK
GALVSIFSQFTTHQQRLGVEDYSVSQTTLDQVFVNFARYQHEEDNHATYDNKVDVSGEMP
MKTQNSPVPEIA
NT seq
6699 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgcgtctggtggtggagttgttgtggcctctcttcctgttcttaatcctcgtc
agggtgagatcaaccaatcaacccatttatcagggcggatgtcattatccaaataaagcc
atgccgtcctccgggttgctgccttggcttcaaggcatgatgtgtaacataggcaacccc
tgtgtaaaccatcccacgccaggagaagcaccaggacaagtcaacaacttcaacaattcc
ataattgctgggatgttgatcgagctgcagtcactactggcaaacagatccatcctaacc
aaattccagaggctttcagaggatgtggaccattgggctttgattatacagacatctaac
cctgcaaacggtcagcccattcctctgagaagtatcctaaatgacaatgaaatgttcacc
gcatatctgaagaagaacttgtccatgccattgacagtagtcaacagtctgatgaactca
aatattcaccggaatgagatgatgggcatttcaaggcaagacgacctgagaaccaccctc
tgcaatggaacaacacttgatagatatgtggaattcaccagcgcgtctgacaaggaggcc
tttcagaatgtcagctgctccctcccagcacaacagatgagacgagccaaggaagttttc
ctacaaaacctgaatacaagcaagatactcaccaacttacctttggatgtgaatccggca
gagacatttggattagtggggagaactacagaagatgcattacatgtgattgatgaggtg
aacaagttgcagaactcaatgctgttcaagtccgccaacacactggatttcagagcggat
gcgttaggtagtctgaacatgctactatgtggcaaagctccagactccaactccagaaat
accaccatgaatttctctgcttctggactgatgaggaattacacagaaaacagtgtatta
tctgattccaggaaccgcagttccagtgccttctgcaaaatattgattgatactattgag
ggaactcctggcctacatgttgtctggagtatgtttcggcccctaatccaagggaaggtc
ctctacacccctgacacacctgccactcgactaatggtgaaagaggcaaatagcacattc
aatgcattggccatgataaaagagctgccggatgcttgggaggatttcggacatcttgtt
tgggactactttcaaaatggccgccaagtcaatacactgcgggccctgctggataaccct
gtgtttgtagccttgctcaaccaacggctcaaaggcacaagatggacggcagaactgctc
gccaacttcctgtataatgggccacccgagggtcgccccacgggcatgccgccgaatgac
tggcgcaacgcgttcaacaccacaagccaaatcctggacctcctgaagaagttcattggg
tgcttgaacctggataagtttgaggctgccgacagtgagagacatctcatgactagagcc
ttggagctactagagagcaataggtactgggctggtatcgttttcgaagacctcaaccct
gccgccagccacccccctccttacgtcaagtacaagatccgcatggacattgataagggg
gagcgtacgaataagatcaaagaaaggggatggtctcctggggcccgtagcaactccttt
aacgacctgcgctatatatggggaggctttgcctatctgcaggacatgatggaccatggc
ataatacgggcacacacaaacaaatcccagccgctcggcgtgtttgcccagcaaatgcca
tatccctgctatgtggacgatgtgttcctccgctcgctggcacgctctctgcccctgtac
atgaccctggcctggatctactcggtggcaatgatcgtgaagggcatcgttatggagaag
gaggcgcgtctgaaggagacagtgaggatgatggggctgaggagctccacctactggctg
agctgggccgtgtccagcatgctgccgctggctgtcagtgctctcctcctcaccctcatc
ctcaagtatgggaaggtgctgcagtacagcgacccctctgtgatcttcgttttcatgctg
gtcttctgcttggccaccatcatggagtgtttctttatcagcgtgttcttctccaaggcc
aacctggcggcggcgtgcgggggcctcatctacttcgtcctctaccttccgcacctcctc
tgctatgcctggagggacgtcttggggttccaggtcaaaatcgctgtgagtttgctgtcg
tgtgtggccttcgggtatggctgtgagaacttcgccaagtatgaggagcagggcatcggt
atccagtggagtaacattgcccaaaatcctgagggagatcggtacagtttcatcgtgtcc
atcatcatgatgctcatcgacgccctcatctactggctgctcacgtggtacatcgagaac
gtcttcccaggccaatatggaatagccaagccatggtccttccctttcatggcctcctat
tggtgcgggatgtctgcggtgcccaacgctgaccctagtcagttcaaggatcccatggaa
tacaatgattatttggaaaagccaccacccaatatgaaagcaggagtctcaatcaggaac
cttgtgaagatctataaaacgggaaaaaagcttgctgtggatggacttagtgtggacttc
tacgagaatcacatcacctctttccttggtcacaatggcgcaggaaaaacaactactatg
tcaatcttgacgggactgttcgctccaacatcggggaccgctctcataaatggttacgat
atccgcacggacatggacaccattaggaagcatctgggaatgtgccctcagcacaacgtc
ttgttcaatgaccttacagtagaggagcacatctacttctatgccagattaaagggtcga
agccgtgatgaagtgaaaacggagatggaccaaatgatcaaggatgtagggctgccgcac
aaacgcaaggaacttgccaagaacctgtcagggggaatgcaaaggaaactgtcggtggcc
atcgcatttgtgggaggatccaacatcgtcatcctggatgaacccacagcaggggtggac
ccgtacgcccggagagggatatgggaacttctgttgaagtacaaaaaaggtcgcacaatc
atcctctccactcatcacatggatgaggccgacatcttgggagaccgcattgcaattatc
tctcacggcaagatgtgttgttccggctcctccctgttcctgaaaaaatactttggcagt
ggctactacctcactctggtcaaggccggaaatgagcaaattaccaacgagcgcagcgga
gtcaagcagggccaggagaaagaggagacggatgagaccttgaggagaaccagtctggat
gaagggattgcaagccagaactggagcaactctgaccccacagagcttacagctgtcagt
aagctggtgcgtcggcatgttcccgaggcagtgttcctggagagcatcggccaggagatc
acctacatcctgccttacagaggggccaaggatggcacatttgccctccttttcaaagag
ctggacctggagatggctgacattggcttcaccagctacggcatctcggataccacacta
gaggagattttcctcaaagtggcggaggacacaggtgtggatgtggaaattccagataac
aaagcacctttggtaagagacaagacaagaagttcaagggaatccaagcggcaacggcaa
agcctgaccaatgtagggaacacttcagacaaagtgactgggaaaagggctgaagtgaaa
gccaagttcacaagcagagtggaggatgtggagagagttgccaatgtgaatgggaagggc
tccagtgtgataatgggatgggaactaatccggagacaattcctggccctcttcatcaaa
cgtttccaccacgcacgcaggagccgcaaaggcatcattgctcaggtgattctgccagct
gtcttcgtctgcctgtctctcatcttttccgtcatcattcccccttttgctgagtaccct
aatctggagctgcagccatggatgtacgggctgccccaaacgacattctacagcaatgat
ggaccgccaaataatacagaggttgctcaagtggtggactctttggtgaataatcctggg
tttgggactcgctgcatggctaacaaccctataccgaatctcccgtgtgtccccattgat
tctaaatggaccactccctcagtggaaccctctatcaacaacatcttaatcaacgggacc
tggagcatggccaacccttcccctaactgccagtgcagcactcctcaaaagactatcatg
ctgccagattgcccacctggagccggggggctgcctccctctcagaggatccagaatact
acggacacactacaggacctgacagggaggaacatgacagacttcctcttgaagacgtat
gagaaagcaggcaaaaaaaggtacggagggatttccgttggaggagttaactcccaagtc
aggatgactgaaccggaaattgaagctgtaatcagggatttgaaaagcctattcaattcc
ccccaggataacacgactgagcagatccttctgaacgccaagacgctcctgaaagagctt
gggaccagggataacgtcaaggtgtggttctacaaccaagcgtggcacgggatcgtttcg
ttcctcaacgtggccaacaacgccatcctgaggggcaacctgcctacgggccgtgacccc
agggagtacggcatctcctcctccagccaccctctcaacctcaccaaggtgcagctctcc
taccaggcacttgctgccacctccaccgatttggtggtgtccatctgtgtcatcttcgcc
atgtcctttatcccagcgagctttgtcctcttcctcatccaggagcgtgtcaacaaagcc
aagcacttgcagtttgtcagcggcgtcaacccggccgtctattgggtcgccaacttcgcc
tgggatatatgtaactacatagtcccgtgtctaatagtcatcatcatcttcctgtgcttc
caacaaaaagcctatgtgtcccctcctaaccttccagctttgatttggctacttgtaatg
tatgggtggtctatcacacccatgatgtacccagcctcgtttatcttcagtgtccccagc
acggcctacgtggtgctgacctgcgtcaacctcttcatcggcatcaatggcagcttggcc
acctttgtcatggagctgttcgatgatgataaaatcacgcacatcaatgacattgtgaag
caggtgctgctgattttcccgcacttctgtctgggtcgagggctcatcgacatgggcaag
aaccaggccatggccactttatttgaacgcttcggggaagaccgtttccaggaccccctc
agctgggacatggtggggaagaacctgtgtgccatggccatccaaggggcagtcatgttc
accatcactctccttatccagtataaattctgctacaaacccagactgatttctggaaag
tcattctccaaggaggacgaagatgtggatgtcgctcgggaacgtgcacgcgtccatgaa
ggcggtgccgagaatgacctgttgagaatctgcgatctctctaaggtgtactcagggaag
aacattcctgctgtggacagggtgtgtttgggtgttccagccgcagagtgctttggactg
ctagggattaacggggcaggaaaaacaaccaccttcaagatgctgacgggggacatcgcc
gtctccggaggagaggccttcctaaacaaatacagcgtacggacagagatgagagacgtt
caccacaacatgggctactgcccgcagtttgacgccctcaacgaccttctcaccggacga
gagcatctggagttctacgccagactacgaggcgtaccggagaaggaagtcaccatggtg
gcagagtggggcatccagaagcttggcctggtcaaatattccaacaaggcagccggtacc
tacagcggagggaacaaacgcaagctctccaccgccatagctctgattggttgtcctcct
gtggtattcctggacgagccaacgacagggatggaccccaaagccagacgcttcctgtgg
gactgtatcctgagtgtcatcaaagaggaacgctcggtcatcctaacatcacacagcatg
gaagagtgtgaggccctgtgcacacgcatggccatcatggtgaatggacagttcaagtgt
ctgggcagcatccagcatctcaagagcaggttcggggacggctacactgtgatcgtgagg
gtgggcggctcgccccccgctctgggccctgtggaggagtttgtccacgagacctttccg
ggtagcatactgaaggagaagcaccacaacactctgcagtaccagctccccctcagcaag
ggcgctctggtcagcatcttcagccagttcaccactcatcagcagaggctgggtgtggag
gactactctgtctcccagaccactttggatcaggtctttgtcaactttgccaggtaccaa
catgaggaggacaaccatgcaacttatgacaacaaagtggacgtgtccggcgaaatgcct
atgaaaactcagaactcacctgtcccagagatcgcctga
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integrated database retrieval system
