Oncorhynchus masou masou (cherry salmon): 135515541
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Entry
135515541 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135515541
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135515541
UBL E3 ligases
135515541
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
135515541
Cilium and associated proteins [BR:
omm03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135515541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135515541
NCBI-ProteinID:
XP_064795229
LinkDB
All DBs
Position
27:complement(64041578..64072619)
Genome browser
AA seq
1518 aa
AA seq
DB search
MAPTKMKLRVRRRESGGGGQEQEETSKTSSQSVSAEASPDSKCPICLDRFNNMSYLDRCL
HRFCFRCIQEWSNNKVECPLCKQPFSSILHSIKAQDNFKEFTLRPPPVPGENGTAMMAAA
EAAAAALVTARVGGSHGERRRTRRRGGGGGGQGRERRQSGRLWRGRGLSSAPPLPPLHPP
LLPRPEDGGMRGEMDGEDPGVIFDGLTGVSAPPPHDRGVQRLMVRLAARRRSQREGRSVR
LLRPREMLSFRRALYRSGVRVRNARGGCERPRDITAAFYQRNPVALHRLLPWLQRELTVL
YGAHGSLVNIVQRIITSRIARHDMEGGGGAIQDELRPFLLARTDHFLHELISFARSPLSM
EVYDQLSIYDPPAPSYEDRMTSSSSDTDDSVIAISDEEEEEGGSEGERERRPVSVAGSSA
LSQSAWDDETPGPSYSTAEPSQSPMPLSISPGGRDSGPAGANQNPAQDMTAAGNGERVEE
GGEEEEGEQCMIVGFVKAMAERTPELVQLSSDPSDDEGEKQETKETVPQTALTPLSLVVP
PLSIPVPPISLIKNTSTERQGGGGERQRGGGERGLGVRHLDREREQVEERLLYCPLGERR
EGRHRERSCSGSRSRSRHRSASVWSRSDRSRSSERSWSARSPVSVRSDDSSQERRRKRRA
REREKRRQEKGRGRGSHDRGSHDRGCHRQHSREHRRETSGGSERSRGRERERIPYEPARS
QYSNTGIFFSPENSVLSHSPSLSRSSQRGPESPGEHRHSRSSDSLSSSSSHLSAHRQPSR
HSPRSDKPAGKRKYKTRHLEDPSWEPSSSARRERGRGGERERGRGGTEATASPRKSRGSL
EDPSWEPSRSARREKGRGGERERGRGGERERGRGGERERGRGGTEATASPRRSRGSLEES
VKKRRHQSRSPSVEIIYEGMTVTTASPLRPKHNRKRDGKHRRKQRHVRTLQRSPMVITID
SDSDNKHAVQTTSLEDDRALDFSDRPLTVPGLPRGGHNMDMGVDISDFAVDVLDRSLSVS
DHNSDIDHNDGIDHKTELDDDCVVDVSVNAKDRVLNTNTNAVDRPQSADGYVLPQVNLTC
DPGVATSDSHLLATILQDLEHITLPNLTFFNNLNPDPNHSRNSTTPDHRENARENARENA
RENTPTPWSSEGETNFNSPVSPSANHSPSSESFTDYHPASPISPVGHPASPISPVGHPAG
SISPVGHPASPISPVGHPASPISPVGHPAGSISPVGHPASPISPVGHPASPISPVGHPAS
PISLVGHPASPISPVGHPASPISPVGHPASPISPVGHPAGSISPVGHPASPISPVGHPAS
PISPVGHPASPISPVGHPASPISPVGHPASPISPVGHPASPISPVGHPASPISPVGHPAS
PISPLGHSDSPISPIGHTAGPIGHSAGPVGHSAGPIGHFAGPIGHYASPISPIGHSAGPV
GHSAGPVGHSAGPIGHSASPVHHNSSAVSPIVQHSNNPLSSPIAGSISVENPRLPSSTGS
SVSASPVSARHDQEGPIH
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggcccctaccaagatgaaactgcgtgttcggaggcgggagagcggaggaggtggccag
gaacaggaagaaacctccaagacctcctctcagtccgtgtcggccgaggcgtctcctgac
tctaaatgcccaatctgtctggaccgcttcaacaacatgtcttacctggacaggtgcctc
catcgcttctgcttccgctgcattcaggagtggagcaacaacaaggtggaatgtcctctg
tgtaaacagccattctcctccatccttcactcgatcaaggcccaggacaactttaaagag
tttactctcaggccacctccggttccgggggagaacgggaccgcaatgatggccgctgcc
gaagcagccgccgctgccctggtgaccgccagggtcggtggtagtcatggagaacgaagg
aggacgaggagaagaggaggaggaggaggggggcaggggagagagaggagacagtcagga
cgactgtggagagggaggggcctctcttctgctcctcctctccctcctcttcatccccct
cttctacccaggccagaggatggaggaatgagaggagagatggatggagaggacccgggg
gtcatctttgatgggctgactggtgtgtccgcccccccacctcacgatcgaggggtgcag
cgtctcatggtgcgtctggctgctaggcgacggtcccagagagaggggcgctccgtaaga
ctgctccgaccacgggagatgctttccttccgcagggcgctctaccgcagtggcgtacgc
gtcaggaacgcccgcgggggctgcgagaggccccgtgacatcactgctgcgttttaccag
cggaacccggtggctctccacagactcctcccctggttacagcgggagctgacagtgctg
tacggcgcccatggctcattggtcaacatcgtccaacgcatcatcacctcgcgaatcgca
cgtcacgacatggagggagggggtggggccatccaggacgaactccggcccttcctgctg
gcgaggactgatcacttccttcacgagcttatcagttttgcacgttcccctctcagtatg
gaagtgtatgaccagctgtccatctacgaccctccagcgccgtcctacgaggacaggatg
acatcatcatctagcgacactgacgactctgtcatcgccatttcggatgaagaggaagag
gaaggagggtcggagggagaacgagagagacggccggtgtcggtagcaggaagtagcgct
ctgagccaatctgcttgggacgatgaaacaccaggaccctcctactctacagctgagccg
tcccaatcccccatgccgctgtcgatcagcccaggggggagggactctggtccagcgggg
gctaatcagaatcctgctcaggacatgacagcggcaggaaatggagagagggttgaggag
ggaggagaggaagaggagggggaacaatgtatgatagtagggtttgttaaagccatggct
gagagaactcctgaactggtccaactctcctctgacccctcagacgacgagggggagaaa
caggagacgaaagagactgttccacaaacagcgttaacccctctctctctcgttgtccct
cccctctccattccagttccccccatctctctgattaaaaacaccagcacagaaagacag
ggaggagggggggagagacagcgaggagggggggagagaggactgggagtaagacatcta
gacagagagagagagcaggtagaagagagactcctctattgccctctaggggagagaagg
gagggcagacaccgagagcggtcgtgttcaggatcgcggtccagaagcagacatcggtca
gcgagcgtttggtcgcggtccgatcggtccaggagttctgaacggagctggtcagcacgg
agccccgtgtccgtacggagcgatgacagcagccaggaacggcgccggaagagacgggcg
agagagcgggagaaaaggagacaggagaaaggaagaggaagaggctcccacgacagaggc
tcccacgacagaggctgccatagacaacacagcagagagcacaggagagagaccagtgga
ggaagtgagaggagcagaggtagagagagagaaaggattccatatgaaccagccaggtcc
caatattctaacactggaatattctttagtccggaaaacagcgtcctctcccattccccg
tccttatcccggagtagtcagcgaggaccagaatctcctggggaacaccggcattcccgg
tcctctgacagcctctcttcctccagctcccatctctctgcacacagacagccttcccga
cattccccacgctccgacaagccggcagggaagaggaaatataagacacggcatctggaa
gacccttcctgggagccatccagctctgcacggagagagagggggcgagggggtgagcga
gagagggggcgagggggaacagaggccaccgctagcccccggaagagcagaggcagtctg
gaagacccttcctgggagccatccaggtctgcacggagagagaaggggcgagggggcgag
cgagagagggggcgagggggcgagcgagagagggggcgagggggcgagcgagagaggggg
cgaggcgggacagaggccaccgctagcccccggaggagcagaggcagtctggaagagagc
gtgaagaagaggagacatcagtcccgcagccccagtgtcgaaatcatctatgaaggcatg
accgtgaccactgctagccccttacgacccaaacacaaccgcaaacgcgacggcaaacac
cggagaaaacaacgtcacgtccgcaccctccaacgctctcccatggtcatcactatagac
agcgacagtgacaacaaacacgcggtccaaaccaccagtctggaagatgaccgcgctctg
gatttctctgaccgtcctttgaccgtgcctggtcttccacgaggcggccacaacatggac
atgggggttgatatcagtgattttgcggtcgatgttctcgaccgttctctgagcgtttcg
gaccataactcggacattgaccacaatgacggaatcgaccataaaacggagctcgatgac
gactgtgtggttgacgtttctgtcaacgccaaggaccgcgttctgaacacaaacactaat
gcggtcgaccgtccccagagcgcagacggttatgttctcccccaggtcaatcttacctgt
gaccctggggtcgcgacctctgactctcatctcctagcgacgatcctacaggacctagaa
cacatcacactccctaacctgacttttttcaacaacctgaacccagaccctaaccacagc
cgtaattcaaccacaccggaccacagggagaacgccagggagaacgccagggagaacgcc
agggagaacacaccgactccctggtcctctgagggagagactaacttcaacagccctgtt
tcaccttcagccaatcactctccgagttctgaatcattcacagactaccaccctgctagt
cctatatctcctgtaggtcaccctgctagtcctatatctcctgtaggtcaccctgctggt
tctatatctcctgtaggtcaccctgctagtcctatatctcctgtaggtcaccctgctagt
cctatatctcctgtaggtcaccctgctggttctatatctccagtaggtcaccctgctagt
cctatatctccagtaggtcaccctgctagtcctatatctcctgtaggtcaccctgctagt
cctatatctctagtaggtcaccctgctagtcctatatctccagtaggtcaccctgctagt
cctatatctcctgtaggtcaccctgctagtcctatatctcctgtaggtcaccctgctggt
tctatatctcctgtaggtcaccctgctagtcctatatctcctgtaggtcaccctgctagt
cctatatctcctgtaggtcaccctgctagtcctatatctcctgtaggtcaccctgctagt
cctatatctcctgtaggtcaccctgctagtcctatctctccagtaggtcaccctgcaagt
cctatatctcctgtaggtcaccctgctagtcctatatctcctgtaggtcaccctgctagt
cctatatctcctcttggtcactctgacagtcctatatctcctataggtcacactgctggt
cctataggtcactctgctggtcctgtaggtcactctgctggtcctataggtcactttgct
ggtcctataggtcactatgctagtcctatatctcctataggtcactctgctggtcctgtc
ggtcactctgctggtcctgtcggtcactctgctggtcctataggtcactctgcgagtcct
gtacatcacaactctagtgcagtatcacccattgtccagcattctaacaatcctttatca
tcacccatagctggctctatatcggtagaaaacccccgcttaccttctagcactgggtca
tctgtatcggccagtcctgtatcggccaggcatgatcaggaggggccaatacactaa
DBGET
integrated database retrieval system
