Oncorhynchus masou masou (cherry salmon): 135515579
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Entry
135515579 CDS
T10723
Name
(RefSeq) mRNA-decapping enzyme 1B-like
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135515579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135515579
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135515579
mRNA degradation factors
5'-3' decay
Decapping complex
135515579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
135515579
NCBI-ProteinID:
XP_064795274
LinkDB
All DBs
Position
27:5320403..5351631
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AA seq
695 aa
AA seq
DB search
MTASSSGGNTCLTAKGLDISLAALQRQDPYINNIVDVASQVALYTFNNRSNEWEKTDVEG
TLFVYTRLASPRHGFTIMNRLSMENLTEPITKDLDFQLQDPFLLYRNARLAIYGIWFYDK
ADCQRIAELMKYLTKQEQALAQRGQQGQGGLVSPRALEAAGDPGKGQGVDILQMLTKARN
EYDKGGQPEPKEIGGCSVLNANPSLIKPIPVKPMERYPQPGLQERPVQDGRGEPRPLSLA
TLFGVQQPRAELVSPMAGSGGPVSQPQGKPGGVRPAVARSLSYDDPVQAQEGGLISGSSP
PQHCPAFQKLMKDAAASSQPQEQLQRGGPMEQLQRGGPMEQLQRGGPMEQLQRGGPMEQL
QRGGPMEQLQPVSESPENRLRENGTPSVLHHQTRQDPIQRLFQNQPTSTTPSMTTSAPCC
PRPPPLIPGLQSAHPQPVLVDALGFPGSQHHHLPPHQARSLYFSPSKPPQMLVPMLPSHP
LPPCHPFHPFQNPQPLYLQPLPAPPQPGQLTGVVSPHELLQRLQLVQQEQSLVPEPTRPS
SNLAPRFHEPAPLAPSAPPAMGQHGQQPAHSTARSLDSLADKNSAGTATQKFQVISPQRI
PATVATTLLLSPSVFSQAKRPQAKASGDTHCPPGPNPPSALLAPQAPDDPQPRGLSKSQL
QATLLHLIQNDSSFLDTIYESYAHGFSTETTANKF
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaagctcatcgggtggaaacacctgtctcactgctaaaggtttggacattagt
ctcgcagccctgcaaagacaagatccttacatcaacaacattgtagatgtggcgagtcaa
gtggcgttgtatactttcaacaaccgatcaaatgaatgggagaagactgatgtggagggg
accctgtttgtctatacaaggctagcatctcccagacacggcttcaccataatgaacagg
ctgagtatggagaacctgactgaacccatcactaaagacctggacttccagctgcaggat
ccgttcctgctctacaggaatgctcgcttagctatctatggcatctggttctatgataag
gcggactgccagcgcatcgcagagcttatgaagtatctgacgaaacaggaacaggcccta
gcccagcggggtcaacagggtcaggggggcttggtgtctcctcgagccctggaggcagca
ggggaccctgggaagggacaaggagtggacatcctgcagatgctgaccaaagcacgcaat
gagtatgacaagggtggtcagccagagcctaaagagataggagggtgtagtgtccttaat
gccaaccccagcctgatcaaacctatccctgtcaaacctatggagagatatccccagcct
gggctacaggagaggcctgttcaggatggtcgaggagagcccaggcctctctctctggcc
actctgtttggtgtacagcagcccagagcagagctggtctctcccatggctgggtcagga
ggtccagtgtcccagccccaggggaagcctggaggtgtccgcccggcggtggcccgctcc
ctgtcctacgacgacccagtccaggcccaggaagggggtctgatctcaggtagcagcccc
ccgcagcactgccctgccttccagaagctcatgaaggatgccgccgcctcctcccagcct
caggagcagctccagagaggaggtcctatggagcagctccagagaggaggtcctatggag
cagctccagagaggaggtcctatggagcagctccagagaggaggtcctatggagcagctc
cagagaggaggtcctatggagcagctccagcccgtctccgagtcacccgagaacagactg
cgtgagaacggaaccccctctgttctccaccatcagaccagacaagaccccatccagaga
ctgttccagaaccagcccacttccaccaccccttcaatgaccacctccgctccctgttgt
cctcgtcctcctcctctcatccctggtctccagtctgcccatcctcagcctgtcctggtg
gatgctttgggcttccctggttctcaacaccatcacctccctcctcaccaggcccggtcg
ttgtacttcagcccctccaagcccccccagatgctggtccccatgttgccctcacacccc
ctcccaccctgtcaccctttccaccccttccagaacccccagcccctatacctccaaccc
ctgccagctcccccccagccggggcagctaaccggtgtcgtctccccccatgagctgctc
cagaggctgcagctggttcaacaggagcagagtctggtcccggagcccactaggccttcc
tctaacctggctcctcgcttccacgagccagcccctctagccccctcagcccccccagcc
atggggcagcacggccagcagccggctcattctacagccaggtctctggacagtttggct
gacaagaactctgcaggcaccgctactcagaagttccaggtgatctccccccagcgtatc
ccagccacggtggcaactaccctgctcctgtcccccagtgtcttctcccaggccaagcgc
ccccaggccaaagcctctggggacacccactgcccccctggccctaatcctccctcagcc
ctcctggccccacaggcccctgacgacccccaacccaggggcctctctaagagccagctc
caggccaccctgctgcacctcatacagaacgacagttccttcctggataccatctatgag
tcctacgctcacggcttctccacggaaaccaccgccaacaagttctga
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