Oncorhynchus masou masou (cherry salmon): 135515872
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Entry
135515872 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36-like isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135515872
04121 Ubiquitin system [BR:
omm04121
]
135515872
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135515872
Membrane trafficking [BR:
omm04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
135515872
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135515872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
zf-RING_UBOX
SPRY
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
135515872
NCBI-ProteinID:
XP_064795780
LinkDB
All DBs
Position
1:complement(12356957..12384149)
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AA seq
771 aa
AA seq
DB search
MSDTADTEDNQDMLPSLVQRIVQRITAGEVPIKNIERELICPICKELFTHPLILPCQHSV
CHKCVRELLLLNHEDSFDAGSECSLPGSPGPRSRVPSPSMERLDRLARSATLQRRSFGRR
GRRGFHFLNSCSSSISSPGWRRGSVTPRVTTFPCPGCQHDVDLGERGMSMLFRNFTLESI
VERYRQAARAAVAIMCNMCKPPQQEATKSCMDCKASYCNECFKFHHPWGTPKAQHEYVGP
TMNFRPKVLMCPEHEMEKVNMYCEVCRRPVCHLCKLGGSHANHKVTSMSSAYKILKEKLS
KSIHYLISKEDQVRTQISHLEVLINETEENGQVAECGAYEHFERLFQTLQERKSEMLNSI
EQSRTRRLEQLRGQVEEYQGMLENSGLVGYAQEVLKETDQSCFVQTAKQLHTRIAKSTES
LRTFHPAADPSFDEFVLETSREETMLKELCFGGVPEPPIIDLSRSHVYNEGLLCWQLAED
TLATDHQVLEYRRLGAEQDGDSRWRLTDRVYGPSTVVCDLEADSLYSFRVRSCRNSLYSP
YSPEVTFHTPPAPAFGFLFNDNCGFSSERLALSRRRDSVESMAGMAFLLAAERVQTGSYM
GLDYIIGDTGISQGRHYWAFRVEPHSYLVKVGVASDSKLLEWFHNPRDTSSPRYDHDSGH
DSGSEDTCYDLSQPFTLLTVGMGKMFLPKASISAGSDHGDHSNRVLPMPQRIGVCLDYDA
GRVYFYDADTMRCLYERQVDCSGTMYPAFGLMGSGKVHLEEFITAKRLSYM
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataccgcggataccgaagataatcaggatatgttaccgagtttggtccagcgg
atagtgcagcggataacagcgggagaggtccctatcaagaatattgagcgggagctcatt
tgtccgatttgtaaggagctgtttacgcaccccctcatcttgccctgtcagcacagtgtt
tgtcacaagtgtgtgcgagagctgctactgttgaaccatgaggattccttcgatgctggg
tctgaatgttccctccctgggagcccaggaccccgatccagagtgccctcgccaagcatg
gagaggctggataggcttgcaagatcagccacactgcagagaaggtcgtttgggaggaga
ggtagacgcgggttccattttttgaatagctgtagtagctccatctcctcaccaggatgg
agacgtggctctgtgaccccccgcgttaccactttcccgtgcccaggctgccaacacgat
gtggacctgggtgagcggggcatgagcatgctcttccggaacttcaccctggagagcatc
gtggagcgctaccggcaggcagcccgcgccgccgttgctatcatgtgcaacatgtgcaag
ccgccccagcaagaggccaccaagagctgcatggactgcaaggccagctactgcaatgag
tgcttcaagttccaccatccatggggcacccccaaagcccagcacgagtatgtggggccc
accatgaactttaggcccaaggtgctgatgtgtccagagcatgagatggagaaggtcaac
atgtactgcgaggtgtgccgccgtccagtctgtcacctgtgcaagctgggaggctcccac
gccaaccacaaagtcacatccatgagcagcgcctacaagatcctcaaggagaagttatca
aagagtatccattacttaatcagcaaagaggaccaagtgaggactcagatttcccacctg
gaggtgttgatcaatgaaactgaggagaatggccaggtggcggagtgtggggcctatgag
cactttgagcggctgttccagaccctccaggagaggaagtctgagatgctgaactccatc
gagcagtcgaggacgcggcgtctggagcagctcaggggccaggtggaggagtaccagggc
atgctggagaatagtggcctcgtgggctacgcccaggaggtcctcaaggagacagaccaa
tcctgcttcgttcagacggccaagcagctgcacaccagaattgcaaaatccaccgagtct
ctgaggacgttccaccccgcggctgacccctcctttgatgagtttgtgctggaaacttcc
agagaggagactatgctgaaggagctatgttttgggggagtcccagagcctcccatcatt
gatctgtcccgtagtcacgtctacaacgagggcttgttgtgctggcagctggctgaggat
accctggccacagaccaccaggtgctggagtacaggaggctgggcgcggagcaggacggc
gacagccgctggcgcctcacagacagggtgtacggccctagcacagtggtgtgtgatctg
gaggccgacagcctctactcgttccgagtccgcagctgccgcaactccctctacagcccc
tacagcccagaggtcaccttccacacaccacctgccccagcatttggcttcctattcaac
gacaattgcggcttcagctcggagcggctggcgttgagcaggcgccgtgactctgtggag
agcatggccggcatggccttcctgctggctgctgagcgtgtgcagacaggcagttacatg
ggcctggactacatcatcggtgacacgggcatctctcagggcagacactactgggccttc
cgcgtggaaccccactcctacctggtcaaggtgggcgtggcctctgattccaaactgctg
gagtggttccacaacccccgagacactagtagccccaggtacgaccacgacagtggacac
gacagtggcagcgaggacacgtgctatgatctgtcccagccctttactctgctcactgtg
gggatgggcaaaatgttcctccccaaagcctccatctctgccggcagtgaccacggtgac
cacagcaaccgggtgctgcctatgccacagcgtatcggcgtgtgcctagactacgatgcg
ggccgggtctacttctatgatgcagacaccatgaggtgcctttacgagcggcaggtggac
tgctccggtaccatgtatcctgcctttggcctcatggggagtggcaaggttcatctagag
gagttcatcacagcaaagcggctgtcgtatatgtga
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integrated database retrieval system
