Oncorhynchus masou masou (cherry salmon): 135515895
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Entry
135515895 CDS
T10723
Name
(RefSeq) coatomer subunit beta'-like
KO
K17302
coatomer subunit beta'
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135515895
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135515895
Membrane trafficking [BR:
omm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
135515895
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
135515895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
PEP5_VPS11_N
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
135515895
NCBI-ProteinID:
XP_064795813
LinkDB
All DBs
Position
3:complement(37426271..37441982)
Genome browser
AA seq
944 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSAPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKLG
REEPAMSMDTNGKIIWAKHSEVQQANLKAMGDTEIKDGERLALAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELVRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLSEKVAASQENNEGVTEDGIEDAFEVQGEIQEVVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSSDSEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNAAMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDHCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAAESLADPTEYENLFPGLKESFVAEQFLRETCLGNSRPATDYPLVTPNEERNILEDA
TGYEPKGVPPSLATLVPGEDCREETTLAAGVLASVLTPPAIPSEQEPEAAPEEEPSPGSS
VPQMNKALDELENDLDNLELDDIDTTDINLDTTDINLEDDFLDD
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaggctggacatcaagcggaagctgacagcccggtcagaccgggtgaagagt
gtggacctccacccgaccgagccatggatgctggccagcctgtacaatggtagtgtctgc
gtctggaaccatgaaacacagaccttggtgaagacctttgaagtgtgtgaccttccagtg
agagcatcgaagtttgtagcaaggaagaactgggtcataacaggagccgatgacatgcag
atccgtgtgttcaactacaacaccctggagagggttcacatgtttgaggcccactctgac
tacatccgttgtattgccgtgcatcccacccagccctacatcctcacaagcagtgacgac
atgctgattaagctgtgggactgggagaagaagtggtcttgcagccaggtgttcgagggc
cacacccactacgtcatgcagatcgtcatcaaccctaaagacaacaaccaatttgccagc
gcttctctggacagaaccatcaaggtttggcagctaggctcctctgctcctaacttcacc
cttgagggccatgagaaaggtgtcaactgcattgactactacagtggaggggacaagccc
taccttatatcaggagctgatgaccgcctggtcaagatctgggactaccagaacaagacg
tgtgtgcagaccctggagggacacgcccagaatgtgtcgtgtgtcagctttcatccagag
ctgcccataatcatcacaggctcagaagacggcactgtgcgcatctggcactcgagtacg
taccgtctggagagcacgctgaactacggcatggagcgggtgtggtgtgtgtgtggcctg
cgaggctccaacaacgtggccctgggttatgacgaaggcagcatcatcatcaagctgggg
cgtgaggagccagccatgtccatggacaccaatgggaagatcatctgggccaagcactca
gaggtgcagcaggccaacctgaaggccatgggcgacacggagatcaaggacggagagagg
ctggcgctggccgtcaaagacatgggcagctgtgagatctacccccagaccattcagcac
aaccccaacggaaggtttgttgtggtgtgtggagacggagagtacatcatctacactgcc
atggcactgaggaacaagagcttcggctcagcccaggagtttgtctgggcacatgactcc
tctgagtatgccatcagagaaagcaacagtgtggtcaaaatcttcaagaacttcaaagag
aagaagtctttcaagccagactttggggctgaaggtatctatggaggcttcttgctgggc
gtcaggtcagtgaacggactggccttctatgactgggagaacacagagctggtccgccgc
attgagatccagcccaaacatatcttctggtcagactcaggggagttggtgtgtatagcc
acagaggagtccttcttcatcctgcgctacctgtccgagaaagtagccgcctcccaagag
aacaacgagggagtgacagaggatggcatcgaagacgcctttgaggtccagggggagatc
caggaagtggtgaagacaggtctgtgggtgggagactgcttcatctacaccagctctgtc
aacagactcaactactttgtggggggagagattgtcaccatcgctcacctggacagaacc
atgtacctgttgggctacatccccaaggacgaccgcctgtacctgggcgacaaagagctg
aacatcgtcagctactccctgctggtgtctgtgctggagtaccagacagctgtgatgcgc
agggactttggcatggccgacaaagtgttgcccaccatccccaaggaacagaggacccgt
gtggcccacttcctggagaaacagggcttcaagcagcaggctctggctgtgtcgtcagac
tcggagcacaggtttgagctggccctgcagcttggggagttgaagatcgcctatcagctg
gctgtggaggcagagtcggagcagaagtggaagcagctggcagagctggccatcagtaag
tgccagtttagcctggcccaggagtgcctccaccatgcccaggactatggaggcctgctg
ctgctcgccacggcctcgggcaacgctgccatggtgggcaagctggccgagggtgctgag
cgggatggcaagaacaacgtggccttcatgacttatttcctgcaggggaaactggaccac
tgtctggagctgctgatccggaccaaccggctgcccgaggcagccttcctggcccgcacc
tacctgcccagccaggtgtccagggtggtcaagctgtggagggagagcctggccaaggtc
aaccagaaggcggctgagtcgctggccgaccccaccgagtatgagaacctgttccccggt
ctgaaggagtcgtttgtggccgagcagttcctccgggagacctgcctgggcaactcccgg
ccagccactgactaccctctggtcacacccaatgaagaacgtaatatactagaggatgcc
acgggctacgagcccaaaggagttcccccctcacttgccacactggtaccaggtgaagac
tgcagggaggagaccacgttggctgctggagtgctggcatccgtgttgacgccccccgcg
atcccctcggagcaagagcctgaggctgcacctgaagaggagccgagccccggttcttca
gtgcctcagatgaacaaggccctggacgaacttgaaaatgacctggacaacttggagctg
gatgacatcgacaccacggacattaacctggacaccacagacattaacctggaagatgac
ttcttagatgactga
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