Oncorhynchus masou masou (cherry salmon): 135515959
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Entry
135515959 CDS
T10723
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omm03009
]
135515959 (utp20)
Ribosome biogenesis [BR:
omm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135515959 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
DUF6415
Motif
Other DBs
NCBI-GeneID:
135515959
NCBI-ProteinID:
XP_064795930
LinkDB
All DBs
Position
27:28975243..29003817
Genome browser
AA seq
2832 aa
AA seq
DB search
MKIKSKSSYHKSENTFRFLTFAERLANVNIDVIHRIDRTGSYDEEVDTYFSEGLTKWRDL
NLTEHFTTFLREVSNKSQSFNLLVFHQRSIVESLKTHLSTKNSLACQPLLDLVVQLARDL
QMDFYPHFPDFFVIITSLLETQDTEILEWAFTCLSYLYKYLWRLMVKDMTKMYSLYSTLL
AHKKEHIRKFAAESFSFLMRKVPDLDALLNHMFLDLEEHPGKAEGVGQLLFEMCKGVRNM
FHSCAGTALPIALRKLGPSADQEVSLPWDAVREALDQMAQAAADHVEKEHFLVLWESLQA
CVSEALRNLNKTDVDEEGQASDHLERLLFILHTLVGHRNGAKITKPDAVCQAVHELLQTP
ALPGPCCRLVLQIISSLLLGENVSLPNTLTQDTVKKVFSSGMDQDLILEFTKEMFTMKRF
EQFFLPSLLQYLEGFFSSQDSVSRLSATEVLVSLILAKAPPPTDGSMAFETYPLVFTGKT
PGKEPGDGTEKVSVPELILSLISLPHDPNQTITDLSLPWAALVLLPHLRPLAAGCVVPSL
TALLNRLLLNVEREALGKGGLFVARQALSSLLSLNGSAEVLSLVPVERVKPIIQKFPTDM
SALLLGDLYYTRLSVNGCSEHLSHGALLDLHQMLHVNLSSNSSKIRLLTLRILTHFEAEL
KPSESEDSVEVQPVFAVCFQAELVPASVQDYREKLLHLRKLRHDLVERSLPQGTQGTFQQ
VPLRYLMSMLFVNFKPLWDPVIELIVTHARGMDNKDFWRVYHEQLELVAGLAEKELREGD
DDDEDGGSELQGEPGCDVIESGDVGVLFLQRLKMTSDPSDRTDFTNFRGLLWRAMALVPD
RVEPRSRELSPLLLRFIRNEFYQADLLVAPTQDLRKRSSPAAMEASMVGEEEEDREEEEE
ARPERKMPPKRAAAKQLIAHLKVFAKFTNPRSLYLENSLNELYTQLLCHQDQQIQRAALE
CVLTYKDPNVLPYKENLERLLDDKHFKDEIVHFNISEEQAVVDASHRAQLIPLLMRVLFG
RMRSKTGSKFQSKSGAMQRSSIVLRFLAGCQSEELGMFIDLLLEPVCHHGQGLCLAAVDK
AISETDFSAVLPLGRQHSLLNIVNTVISKLGHLINTHLPRVLQILLCVTASVSTILNQRE
QLKAGCIAPLKNLRRLGVLRIQDFFDGFDSYSFTPDELDAVFQAIVWPQVCRLPTEGPYS
PTPLLKLIHVWSKNARYFPLLAKQKSGHPECDILLNVFALLSAKNVSTQTVAMVMDIAES
LVTTKDLLVSEGEEAELSVNGSVFPQPPEGAYISLEHLTQGARLLLPHISTLLQYLSGIV
RSSVRLKKKKFRSQVAKELNILSKLSRFVSDKDQSSVLIRLLLPYLQKARNPQETEIDIL
STVQNLLRQCSNPAYFLKPISRLFSILHNKLPRQALTSVFQTLGDLEGGLKYITDTAAKL
NAFDSRHLDEVYFDVRLTAFQEATRRINDMDTLDMNFIYTVMHNCFASFEIGDMSLADNA
TLCLSAVLTRLAAVGRGDEDYKEIVQYTILDAVRKGLRSKTESVQHDYTTVLACLVKTFP
TRRDFRDLVQLTDYNDPESDFFEHMKHIQIHRRGRALRKFAKQLTEGTVVMSSRSLQTYI
MPYAMTALFDEKMLKNEGMTSASVEVIGAVCRRLTWSKYLYYLKHFVHILQTGQAEQKLA
VSLLVTVLEAFHFDHDTLEREMEAAKTRAKEVVSTVVDEEVDEEEVAAVESEDSDSEEAM
ETETDTKTTTIETATVVTMDTAAAETVEGVAMETNATESTEEPKAVPVRKPTPSTTAPAA
PSGLPQSKAQLEALITSIHATVQNAVLPRLHKCLTAKVKRDEECKAVKSKDVKEEEVARV
PIAFAMVKLMQTLPSTVMDVNLPGILMKMCVLLRNRFQEIRDVARNTLIKIVETLGVKYL
QYLLKEMKSILVKGYQVHVLTFTVYQLLSHLAPILKPGDLDHCMGLLIDIFNSELFGAVA
EEKEVKGIVSKLMEARHSKSMDSYEFLGQYSGKDRVIQLILPMKDILENTANLKTARRAH
AVLKRIVSGLLVNQAMDHQAVLLLSHGLVSESLPLVTKRNKDKKPQAPPDPRLPPPSCLL
LPTTPKRGGLKAPVSSRTNMHILVDTGLRLLHMSLKKSKVNSSEASALEMLDPFFALLLD
CLNSMHVKVITEALLAFTFLLRFALPAVEQNAGQLTKQLFVLLKDYSKAGAARGENFQLV
QNCFKSITILVKNTKTHKITETQLQVLLGYAEEDIYDQSRQATAFGLLKAILSRKLVVPE
MEELMKKVAKLSVTGQNGMIRVQCRHIYQKYILDYPLGKKLRSHLDFIVAQLSYEFDTGR
EAALELMAYIFQTFPQNLLLQHSGLFFVPLALAMVNDDSARCKKMAAVAIKSLLSQLDQQ
HQNTLFTLVNTWLSGDKVSLRRLGAQVCGLFVEVEGVQFGRRLDALLPLIEKEIHPNNFE
DIEEEKDEKAADRLLFSYLTLVTKLTKDCSLLELSKPQDTLTNILGHVETHLRYPHCWVW
LTASQLFGQLFAAHRPDQLVARWREETTEKGGAKNATTPEPVATTFLTTNLDKKMRELVL
SFCHQLQSKYLDTSTGEQVIKNLLFVAKVIYLISPESEIPPAREVEEGGEEEEMENGGDR
ENDGKDDEGEKGDEEEEDEKDDRPPSLLWMMKKLSLMAKREAADTPKIPLKRTCVFKFLG
AIAVDLGKDRLGPYLTTIIAPLYRELDSTYADQDPTLKNLSQELIELLKKQVGLQTFSLA
FSAVQKDASQRRANRKKHKAMQAVANPDIAARKKLKKHKNKIEAKKRKIEFLRPGYKAKR
QRNSLKDLAMVK
NT seq
8499 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaatccaagtcgtcgtatcataaatctgagaacacattcaggtttctcacg
tttgctgaaaggcttgccaatgtcaatatcgacgtcatccatcgcattgacagaactgga
agttatgatgaggaggtagacacttacttttcagaagggctgacaaaatggagggacctg
aatttgacagagcatttcaccaccttcctgagggaggtgtccaacaagagccagtccttc
aaccttctggtgttccatcagaggtctatagtggagagcctgaagactcaccttagtacc
aagaacagccttgcctgccagcctctactggacctggtggtccagctggctcgggacctc
cagatggatttctacccccacttccctgacttctttgtcatcatcacctctctcctggag
acccaggacaccgagatactggagtgggccttcacctgcctctcctacctctacaagtac
ctctggagactcatggtcaaggacatgaccaagatgtacagcttgtacagtacactgttg
gcacacaagaaggaacacatacgaaagtttgctgcagagagtttttcttttctgatgaga
aaggtgccagatcttgacgcccttctcaaccacatgttcctggacctggaggagcaccct
gggaaggcagagggggtgggacagctgctgtttgagatgtgtaaaggagtccgcaacatg
ttccactcctgcgctggcacggccctcccaattgctctgaggaagcttggaccaagtgct
gaccaggaagtatctctaccctgggatgctgtcagagaggcactggatcaaatggcccag
gcagcagccgatcacgtagagaaagagcacttcctggttctgtgggagtctctacaggcg
tgtgtgagtgaggccctacggaacctgaataagaccgatgttgatgaggagggtcaggcc
tccgaccacttggagcgtctgctcttcatcctccataccctggtgggacaccgcaacgga
gccaagatcaccaagccagacgctgtctgtcaggcagttcatgagttgctccagacccca
gccctcccaggaccctgctgtagactcgtgctccagatcatctcctctctactgctgggg
gagaatgtctccctgccaaacacactcacacaggacacggtcaaaaaggtgttcagcagt
gggatggaccaggacctgatactggagttcactaaggagatgttcaccatgaaacggttt
gaacagttcttcctgcccagtctgctacagtacctagagggttttttctccagtcaagac
tctgtgtctcgtctctctgccacggaggtgctggtcagtctcatcctggctaaagccccg
ccccctacagacggctccatggccttcgagacctaccccctggtcttcaccggaaagacc
cccggtaaggagccaggtgatgggacagagaaggtgtcagtaccagagttgatcctctct
ctgatcagcctaccacacgacccgaaccagaccatcactgacctgtccctgccctgggca
gccctggtcctcctgccccacctcagaccactggcagcagggtgtgtcgttcccagtctg
acagccctcctcaatcgcctgctactgaatgtggagagagaagcgctggggaaaggcggt
ctgtttgtggccaggcaggccctcagctccctgctcagtctgaatggatctgctgaggtt
ctctccctggtgccagtggagcgggtcaagcccatcatccagaagttcccaacagacatg
tcggctctgttgctaggagacctctactacacccggctgtcagtcaacggctgctccgag
cacctatcccacggtgctctgctcgacctgcatcagatgctgcacgtcaacctatcctcc
aacagctccaaaatccgcttgctgacactgaggattctgacccactttgaggctgagctc
aaaccgtcagagagtgaggacagtgtggaggtccagcctgtgtttgcagtgtgttttcag
gctgagttggtccctgcctccgtgcaggactacagagagaagctgctgcacctcaggaag
ctcagacatgacctggtagagagatcactaccccaggggacacaggggaccttccaacag
gtgcctctacgctatcttatgtccatgctgttcgtcaacttcaaacccctgtgggaccca
gtcattgaactcatagtgacccatgccagaggaatggacaacaaagacttctggagggtc
taccatgagcagctggagttggtggcaggtcttgctgaaaaggagctgcgtgaaggcgac
gatgatgatgaagatggcggctcggagctgcaaggggagccgggctgtgatgtcatcgag
agcggggacgttggggtgctgttcctgcagcgtctgaagatgacctctgaccccagcgat
aggacagacttcactaacttcaggggcctgctgtggagggccatggctctggtccctgac
cgcgtagaaccacgcagtagggagctcagtccactgctgctacgattcatcaggaatgag
ttctaccaagctgacctgttggtggcgcctactcaggacctgaggaagagaagcagtcct
gctgccatggaggctagcatggtgggagaggaagaggaggacagggaggaggaggaggag
gctagaccagagaggaagatgccaccaaaaagagcagcagccaagcaactcatcgctcac
ctgaaggtgtttgccaagttcaccaaccctcgctctctgtacctggagaatagcctcaat
gagctgtatactcagttgctgtgccaccaggaccagcagattcagagggcagcattggag
tgtgttctgacctacaaagaccccaacgtcctcccctacaaggagaatctggagaggctg
ctggatgacaaacacttcaaggatgagatcgttcacttcaacatctcagaggagcaggcc
gtggtggacgcctcgcacagggcccagcttatcccactgcttatgagggttctgtttggg
cggatgcgcagtaagactggcagtaagttccagagcaagtctggcgccatgcagcgttcc
tccatcgtgctgaggttcctggcaggatgccagtctgaggagctgggcatgttcattgac
ctcctgctggagcccgtctgccaccacggacagggtctgtgtctagctgcagtagacaaa
gcgatatccgagacggacttctctgccgtccttcctctgggtcggcagcacagcctgctg
aacatagtcaacacagtcatcagtaaactgggccacctcatcaacactcacctgcccagg
gtgctgcagatcctgctatgtgtcaccgcctctgtctccaccatcctcaaccagagagaa
cagttaaaggccggctgtatcgctcctctgaagaacctgaggcgcctgggggtcctgagg
atccaggacttctttgatggctttgactcgtacagcttcaccccagatgagctcgatgcc
gtcttccaggctatcgtctggccccaggtctgccgtctgccaacagagggcccctactcc
cccacccccctcctcaaactcatccacgtctggagcaagaatgccaggtacttccccctc
ctggccaagcagaagtctggtcacccggagtgtgacatcctcctcaacgtgttcgccctg
ctctccgccaagaatgtctccacccagaccgttgccatggtgatggacatcgccgagtcc
ttggtgaccacgaaggaccttctggtttcggagggtgaggaggcggagctgagcgtcaat
ggcagtgtgttcccccagccaccagagggagcctacatctctttggagcatctgacccag
ggtgccaggctactcctgccccacatctccaccctgctacagtacctcagtggcatcgta
cgcagctctgtcagactcaagaagaagaagtttagatcccaggtggccaaggagctcaac
atcctctcaaagctcagcaggtttgtgagtgataaggaccagagctcagtgctcatccgc
ctgctgctgccatacctccagaaggcccgcaacccacaggagaccgagattgacatcctg
tctacagtccagaacctgctaagacagtgttctaatcccgcctacttcctcaagcctatc
agtagactgttctccatcctccataacaagctgcccaggcaggccctcacctctgtcttc
cagactctgggagacctggaagggggactgaagtacatcacagatacagctgctaagttg
aatgcgtttgacagtcgtcacctggacgaggtgtacttcgacgtgcgtctcacagccttc
caggaggccaccaggaggatcaacgacatggacacgctggatatgaacttcatctacacc
gtgatgcacaactgtttcgcctccttcgagattggagacatgtccctggctgacaacgcc
accttgtgtctgtctgctgttcttacacgtctggctgcagtgggtcggggagacgaggac
tacaaggagatagtacagtacaccatactggacgcagtcaggaaaggactgaggagcaag
actgagagtgtgcagcatgactacaccacagtgctggcgtgtctggtgaagaccttcccc
acccgtagagacttcagagatctggtgcagctcaccgactacaacgaccccgagtctgac
ttctttgagcacatgaagcacatccagatccaccgcaggggtcgcgctctgaggaagttc
gccaagcagctgacggagggtacggttgtgatgtcatcacgttccctccagacctacatc
atgccctacgccatgactgccctcttcgacgagaagatgctcaagaatgagggtatgacg
tcagcctcggtagaggtgataggagcggtgtgtaggagactgacctggtctaaatatctc
tactaccttaaacactttgttcacatactgcagactggacaggctgaacagaaactggct
gtcagtctgttggtgactgttctagaggcgttccactttgaccatgacactctggagaga
gaaatggaggcagctaagaccagggccaaagaggttgtgagcaccgtcgttgatgaagaa
gttgatgaggaagaggtggcagctgtcgaatcagaggacagtgactctgaggaagccatg
gaaactgaaacagacacgaaaacaaccaccatagaaacggctacggttgttactatggac
acggccgccgctgagaccgttgagggtgttgctatggaaacgaacgccacagaatctaca
gaggagcctaaagctgttccggtgaggaagccgaccccctccactacagcccctgcggct
cctagtggattaccccagagcaaagcacagctggaggccctgatcacctctatccatgcc
actgttcaaaatgctgtcctgcccaggctacacaagtgtctgaccgccaaggtgaagcga
gatgaggagtgcaaggcggtaaagtcaaaggacgtgaaggaggaggaggtggccagagtt
cctatagccttcgccatggtcaaactaatgcagacactgccctcgactgtcatggacgtc
aacctgcctggcatcctgatgaagatgtgtgtgctgctgaggaatcgtttccaggagatc
agagacgtggctcgtaacaccctgattaagatcgtcgagactctgggggtcaaatacctg
cagtacctactgaaggagatgaagtccattctggttaagggctaccaggtccatgtgttg
acgttcacggtgtaccaacttctgtctcacctcgcccctatactgaagcctggagacttg
gaccactgcatgggcctgctaatagatatcttcaacagcgagctgtttggtgcagtggct
gaggagaaggaggtgaaggggatcgtctctaagctgatggaggcccgccacagtaagagt
atggactcctatgagttcctgggccagtactctggcaaggacagagtcatacaactcata
ctgccaatgaaagatatcctggagaacacagccaatctgaagacagcccgtcgcgcccat
gcagtgttgaagaggatagtgtcaggtctactggtgaaccaggccatggaccatcaggct
gtactactgctcagccatggcctggtctcagagagtctgcccctcgtcaccaagcggaac
aaggacaaaaagccccaggcgcccccagaccctcgcctgcctcctcccagctgtctcctc
ttgcccaccaccccaaagagaggaggacttaaagcccccgtcagcagccgcaccaacatg
cacatcctagtggacactggactccggctgctccatatgagtctgaagaagtccaaggtg
aactcctctgaggcctctgctcttgagatgctggatcccttctttgctctgctactagac
tgtctcaactccatgcacgtcaaggtgataacagaagctctcttagcttttacgttcctg
ttgcggttcgccctgccagctgtagagcagaatgcaggccaactcaccaagcagctgttt
gtcctgctcaaagactactccaaggctggcgctgcccgcggagagaacttccaactcgtc
cagaactgcttcaagtccatcaccatcctagtaaagaacacgaagacacacaagataact
gagacgcagctgcaagtgctgctgggatacgctgaggaggacatttatgaccaatcacgt
caggcgacagccttcggcctgctaaaggccatcctgtccaggaagctggtagtgccagag
atggaggagctgatgaagaaagtggccaagctgtctgttaccgggcagaacggcatgatc
agggtccagtgcagacatatttaccagaagtatatcctggattatcctctggggaagaaa
ctgagatcacacctggacttcatcgtggcccagctcagttatgagtttgacacaggaaga
gaggctgctctggagttgatggcctatatcttccaaaccttccctcagaacctgctgctg
cagcacagtgggttgttcttcgtccctctggcactggccatggtgaacgatgactcggct
cgctgtaagaagatggccgctgttgccatcaaatcactgctgagtcaactggaccagcaa
caccagaacaccctgttcaccctggtcaacacttggctgtctggagacaaggtgtctctg
cgtcgtctgggggcccaggtgtgtgggctgtttgtggaggtagagggggttcagtttggc
cgccgtttagatgccctgctgcccctcatcgagaaagagatccaccccaacaactttgaa
gacattgaggaggagaaggatgagaaggcagcagatagactgctgttcagttacctcacc
ctggtcaccaaactcaccaaggactgtagcctactggagctcagcaagcctcaagacact
ctcactaacatcctgggtcatgttgagacccacctgcgttaccctcactgttgggtgtgg
ctgaccgcctctcaactgtttggtcagctgtttgctgcccaccggccagaccagctggtt
gcccgctggagagaggagaccacagagaagggcggtgccaaaaacgccaccacaccagaa
cctgtggcgaccacgttccttacaaccaacctcgacaagaagatgagagagttggtcctg
tcattctgtcaccagctccagtcgaagtacctggacacgtcaacaggagaacaggtgatc
aagaatctgctgttcgtcgccaaggtgatctacctgatctcacccgagtctgaaatccca
cctgcccgggaagtagaggaggggggggaggaagaagagatggagaacggaggagatcgg
gagaacgatggaaaggatgacgaaggagagaaaggtgatgaggaagaggaggatgagaag
gatgatcgtcctccatccttactgtggatgatgaagaagctgtctctaatggctaagagg
gaagctgcagacacgcccaagatacccctcaagagaacatgtgtgtttaagttcctgggg
gccatagctgtggacctgggtaaagacaggctgggtccttacctcaccaccatcatcgct
cctctctacagagaactggacagcacctatgcagaccaagaccccaccctgaaaaacctg
tcccaggagctaatagagctgttgaagaagcaggtggggctgcagaccttctccctggcc
ttctcagccgttcagaaggatgcctcacagaggagggccaaccgcaagaaacacaaggct
atgcaggcggtggctaaccctgacatcgcagccagaaagaagctgaagaaacacaagaac
aagatcgaggccaagaagaggaagattgagttcctgcggcctggctacaaagccaagaga
cagaggaactcactcaaggacttggcgatggtgaaatga
DBGET
integrated database retrieval system
