Oncorhynchus masou masou (cherry salmon): 135516016
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Entry
135516016 CDS
T10723
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein-like
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03010
Ribosome
omm04120
Ubiquitin mediated proteolysis
omm04137
Mitophagy - animal
omm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
135516016
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135516016
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135516016
04137 Mitophagy - animal
135516016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
omm03011
]
135516016
04121 Ubiquitin system [BR:
omm04121
]
135516016
Ribosome [BR:
omm03011
]
Ribosomal proteins
Eukaryotes
Large subunit
135516016
Archaea
135516016
Ubiquitin system [BR:
omm04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
135516016
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Ubiquitin_5
zf-C4pol
TBK1_ULD
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
135516016
NCBI-ProteinID:
XP_064796049
LinkDB
All DBs
Position
3:38133436..38135403
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTSN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccttgacgggtaaaaccatcacccttgaggtggaacccagt
gatactatcgagaatgtgaaggccaagattcaagacaaagaaggtattcctcctgaccaa
cagcgactcatcttcgctggcaaacagttggaggatggccgcacgttgtcagactacaac
attcagaaagagtccactcttcatctcgtcctgcgtctgagaggaggtatcatcgagcct
tccctgagacagctggcgcagaaatacaactgtgacaaaatgatctgccgcaaatgctat
gcacgtcttcacccccgtgcagtcaactgccgcaaaaaaaagtgtgggcacaccagcaac
ctgcgccccaagaagaagctgaagtaa
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