Oncorhynchus masou masou (cherry salmon): 135516021
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Entry
135516021 CDS
T10723
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135516021
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135516021
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
OVT1
Motif
Other DBs
NCBI-GeneID:
135516021
NCBI-ProteinID:
XP_064796055
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All DBs
Position
27:complement(32670920..32697086)
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AA seq
1781 aa
AA seq
DB search
MLILHIASLLTLGWRSFAQLPEFGDVCTEGSCYPATGDLLIGRAHKLTASSTCGIEKPER
FCIVGHLEEVKKCFVCDSREKYDERMNHTTSHSIENLVTTFAPNRLKTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPATMVIERSMDFGEKWQVYRYYSYNCESAFPGISVGPM
VKVDDIICDSRYSDIEPSAEGEVIFRVLDPAFEIEDPYSPRIQNMLKITNLRVQFTKLHT
LGDNLLDSRDEVTEKYYYALFDMVVRGNCFCYGHASKCAPVDGIHVGTEGMVHGHCMCNH
NTEGLNCEHCKDFYNDLPWRPAEGRNTNACKMCECNHHSRSCHFDMAVYLSTGNVSGGVC
DECQHNTMGRQCEQCRPFYYQHPERHLRDPNICEPCSCDLTGSLQGGVCDGRTDVSAGLI
AGQCRCKTSVEGERCDHCRQGHYGLGQGPNGCLQCTCNPLGTLPGGSPCDMDTGNCFCKR
LVTGRNCDRCLPQHWGLSNDMDGCRPCDCDQGGAVNNDCSPISGQCQCREHMYGRRCDQV
ESGYYFIALDHYTYEAEEAKHGPGVTVVPRPYPLNRSPTWTGAGFVKVPEGAHLEFHINN
LPDSMDYDMLIRYEPQLPDQWEQVEVRVIRPYSMGVGQPASPCENTLQGGDQQLVSLLPG
SRHVLLLRPVCLEKGRNYTVRLSLPLYSSLTDVQSPYTLIDSLVLIPRVRELLLFEGSQG
EGAWDTFQRYRCLESSQSVIKSPMTDICNNYIFSVSALLHQGAMACQCDSQGSLSAVCDP
SGGQCQCRPNVAGRNCDRCAPATFLFSPLGCRRCECSPMGSVNAFCHEATGQCECVPGAS
GRQCAHCLPGYWGFPQCQPCQCNGNSDYCHPQTGECQGCRAFTTGHMCERCLDGYHGDPV
LGLGGHCRPCMCPDGPGSGRQYADSCYQTADNYQLVCACSPGYRGARCDECAPGHYGNPQ
VPSGRCLPCQCNDNIDQLDPGSCDTRTGVCLKCLHHTEGYGCQRCKLGYYGNAASQSCRR
CMCYSVGTMSEACPSPEECHCDLQTGQCPCRPNVIGQNCDRCALDTFNIGSGKGCQTCDC
DPTHSFGTSCNELSGQCSCRSGFGGRKCNECRDKFWGDPEVKCQACDCDLRGIASEQCHR
SSGQCVCVEGVSGPRCNQCARGYHGTFPACERCHQCFAEWDRVVGELSNQTQRLKDHVTE
LQTSGVTAPYKDTVSSLEISANAISAIVENNPAIQKMEDVQQMMQQATELVADLNERLNV
SEDSLSRLVVNANDTEASLDALRKQAQELERTVTDIRDHIKTVKNSNIEGAMDTITKAHL
ESKRAEIRANQTTSYPDNTLEQSATLRREAEARLSQNQAEFDLRQQKHTERLERLATELN
TLDLSELSKQTCGAAGGEEGCAASPCGGVGCVSEDGTLRCGGEGCDGLVTQSQITLKTAK
DFDQEILSTLQEVDKLSRMVWEVKMRADEAKLNAQEVLLKSNQSRDRVEQNNEQLRSLIK
EIRGLLTNDRAKVEVIEAVSNEVLALEMPTSPEQLEALTKEIRDRVGTLTSVEDILSQSA
NDIHAAERLLEQARTASQEVSEMKETAALVKEALETTERAQNAAIDAVKQAHNNTRGTLD
LITSVESETAESELCLSNATLRLLQLERDVTLLRESSLGTSHHTQHTERLSETARQDAEQ
ALQEFDLEVKGKYSVVEGLVVTKAEGVSDARKRAELLQQEAKELLTQSSVKLQRFRELER
SYAANQRTLEAKTVQLAGLEKTARQLLNDISQKVMVYSTCS
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgctgatattgcacatcgcatcacttttgaccctagggtggcgctcctttgcccagctg
ccggagtttggcgatgtgtgcactgaggggagctgctaccccgccaccggggaccttctg
atcggccgtgcgcacaagctcaccgcctcctccacctgcggcattgagaagcctgagcgc
ttttgcatcgttggtcacttggaggaggtgaagaagtgttttgtgtgtgactccagggag
aagtatgatgagaggatgaaccacaccaccagccacagcatcgaaaacttggtcaccacc
ttcgcccccaaccgcctcaagacctggtggcagtctgagaatggggtggagaatgtgacc
attcaactgaacctggaagctgagttccacttcacacatctcatcatgacttttaagacg
ttccgtccggctaccatggtgatcgagcgttccatggattttggggagaagtggcaggtg
taccgttactatagctataactgtgagtccgccttccctgggatatccgtgggacccatg
gtcaaagtggacgacatcatctgtgactctcgctactctgacatagagccgtccgcagag
ggagaggtgatattcagggtgctggacccggcgtttgagattgaagacccttacagtccc
aggatacagaacatgctgaagatcactaacctgcgtgtccagttcactaagctccacaca
ctgggtgacaacctgctggactccagagacgaggtcacagagaaatactactatgccctc
ttcgacatggtcgtccgcggcaactgcttctgctacggacatgcctccaaatgcgcccct
gttgatgggatacacgtaggcacagagggcatggtccatggtcactgtatgtgtaaccac
aacacagagggtctgaactgtgagcactgtaaggacttctacaacgacctgccctggagg
cctgcagagggacgcaacaccaatgcctgcaagatgtgcgagtgtaaccaccactccagg
tcatgtcactttgacatggctgtgtatctgtctacggggaacgtgagtggaggagtgtgt
gatgagtgtcaacacaacaccatggggcgtcagtgtgagcagtgcagacccttctactac
caacaccccgaaagacacctgagagaccccaacatctgtgaaccgtgtagctgtgacctg
acgggctccttgcagggtggtgtgtgtgacggcaggacagacgtgtctgctggtctgata
gcaggacagtgtcgctgtaagactagtgtggagggtgagcgctgcgaccactgtagacag
ggacactacggcctgggacagggaccaaacggctgcctgcagtgtacctgtaatcccctg
ggcacactgcctggaggaagcccatgtgacatggacacaggaaactgcttctgcaaacgc
cttgtcaccggcaggaactgtgaccggtgtctgccgcaacactggggcctgagtaatgac
atggacggctgcagaccatgtgactgtgaccagggcggagccgtcaacaatgattgttct
ccgatatcaggccagtgtcagtgtcgagaacacatgtatgggaggcgttgtgaccaggtg
gagtcaggatactacttcatcgccttggaccactacacctacgaggctgaggaagccaag
cacggccctggtgtgacggtggttcccaggccctatcctctgaaccgtagtcccacctgg
acaggggcagggtttgtcaaggtaccagagggagcccacctggagttccacatcaacaat
ttacctgactccatggactacgacatgctgattcgctacgaaccgcagttgccggatcag
tgggagcaggtggaggtcagagtgatacgtccgtactcaatgggagtggggcagccagcc
agtccatgtgaaaacacgcttcaaggaggagatcagcagttggtgtctcttcttccagga
tccagacatgtgctgctcctgaggcctgtgtgtctggagaaggggcggaactacactgtg
cgtctcagtctgcctctttactcctctctcactgacgtccaaagtccctacacgctcatc
gactccttggtgttgattccgcgggtgcgtgagctgctgttgtttgagggttctcagggt
gagggggcgtgggatacgttccagaggtaccgctgtctggagagcagccaaagcgtcatc
aagagccccatgacggacatctgcaacaactacatcttcagtgtgtctgccctgctacac
cagggggctatggcgtgccagtgtgactcccagggctctcttagtgcagtgtgcgacccc
agcggcgggcagtgccagtgtcggcccaatgtggcaggcaggaactgtgaccgctgtgcc
cccgccaccttcctgttcagccccttaggatgcagacgctgtgagtgtagtcctatgggc
tctgtgaacgctttctgccacgaggccacaggtcagtgcgagtgtgttccaggggcgtca
gggcgtcagtgtgcccactgcctgccaggctactggggcttccctcaatgccagccctgt
cagtgcaacggcaacagcgactactgccaccctcagaccggggagtgccagggctgccgc
gccttcaccaccgggcacatgtgtgaaaggtgtctggatggttaccatggcgacccagtg
ttgggtttggggggtcactgccgcccctgcatgtgtcccgacgggccggggagcgggcgc
cagtacgcagacagctgctaccagaccgccgacaactaccagctggtctgtgcctgcagc
cctggatacagaggagccaggtgtgacgagtgtgccccaggtcactatggtaacccccag
gtgcccagcgggcgatgtctaccctgccagtgtaacgacaacatcgaccagctggaccca
gggtcctgcgacactcgcacaggtgtctgcctcaaatgcctgcaccataccgagggctat
ggctgccagcgctgcaagctgggttactacggcaacgccgccagccagagctgcaggagg
tgtatgtgttattcagtgggcacaatgtcggaggcgtgtccgtctccggaggagtgtcac
tgtgacctacagactggccagtgtccctgccggcctaacgtgattggccagaactgcgac
cgctgtgcccttgatacgttcaacattggaagcggaaagggctgccagacctgtgactgt
gacccaacccactcctttgggacgtcgtgcaacgagctgtcagggcagtgctcgtgcagg
tcaggtttcgggggacgaaaatgcaacgagtgccgagataagttctggggagaccctgag
gtcaaatgtcaagcgtgtgactgtgacctgcgtggcatcgccagcgagcagtgccaccgt
tcgtccggccagtgtgtgtgtgtggagggtgtgtctgggcccaggtgtaaccagtgtgcc
agagggtaccatgggacgttccccgcctgcgaacgatgccaccagtgctttgccgagtgg
gaccgcgtggtaggggaactgtccaatcagactcagcgtttgaaggatcatgtgacagag
ctccagaccagtggggtgacggcgccgtataaagacactgttagcagtctggagattagt
gctaatgctatcagtgcgatagtagagaacaaccctgctatacagaagatggaagatgta
caacagatgatgcagcaggccactgagctggtggcagacctgaacgagaggctgaacgtc
tcagaggattccctgtcccgtctcgttgtcaatgccaacgacaccgaggccagtctggac
gcactgagaaagcaggcccaagagctagagagaacagttacagacattcgagaccacata
aagactgtgaagaactctaacatagagggagcgatggacaccatcaccaaggcccacttg
gagtctaagagggcggagatccgtgccaatcagaccaccagttaccccgacaacactttg
gaacagtcggctacactacggcgtgaagcggaggccagactgagccagaaccaggcggag
tttgacctgagacaacagaaacacacagagagactggagaggctcgccacagagctcaac
actcttgacctatcagagctcagcaagcagacatgtggagcagctgggggggaggagggg
tgtgctgcgtccccctgtggaggggtggggtgtgtgtcggaggacggcacccttcgctgt
ggtggggaggggtgtgacggtttggtcacacagtcacaaatcactttgaaaacagccaag
gacttcgaccaggaaatcctctccaccctgcaggaagtggacaagctctctaggatggta
tgggaggtgaagatgcgtgcagacgaggccaagctgaatgctcaagaggtgctgctgaag
tccaaccagagtcgagatagagtggaacagaacaacgagcagctccgcagcctcatcaag
gagatacggggcctactcactaacgaccgtgccaaagtggaggttattgaagcggtgtca
aatgaggtgttggccctggagatgcccacatcgcccgagcagctggaggctctgaccaag
gagatcagagacagggtgggaaccctcaccagtgtggaggacatcctcagtcagagtgcc
aacgacatacacgctgcagagaggctgctggagcaggcccgcaccgccagtcaggaggtg
tctgagatgaaggagacagctgccctggtgaaggaagctctggaaacgactgagcgtgct
cagaatgctgccatcgatgccgtcaaacaggcccacaacaacaccaggggaacacttgac
ctcatcacatctgtggagtcggagacggcggagtcggagctgtgtctgagtaacgccaca
ctgcgtctgctgcagctggagagagacgtgactctgctgagagagagcagcctgggcacc
agccaccacacacagcacactgagagactgtctgagaccgctaggcaggatgcagagcag
gccctgcaggagtttgacttggaggtgaagggtaaatacagtgttgtggagggcttggta
gtgacgaaggcagagggcgtgtctgacgccaggaagagggcggagctactgcagcaggag
gccaaggagttgctcacccagtccagtgtaaaactacagagattcagagagttggagagg
tcgtatgcggccaaccagcgtactctggaggccaagacagttcagctggccgggctggag
aaaacggcacgccagctgctcaatgacatcagccagaaagtaatggtctacagcacctgt
tcttag
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