Oncorhynchus masou masou (cherry salmon): 135516067
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Entry
135516067 CDS
T10723
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135516067
Protein kinases [BR:
omm01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
135516067
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135516067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135516067
NCBI-ProteinID:
XP_064796140
LinkDB
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Position
27:35646537..35661749
Genome browser
AA seq
1140 aa
AA seq
DB search
MDESPEAAVDNDDLVIIVENEAESLPAEEERAKQLGGSIGLMDTCPVCKLNFHNREPKLL
PCLHSFCKKCLPPPSRNLVNSEQRRDPQLQADNSKPLNVIRCPVCRQECWEVEVLDNFFV
KDSVEVPSSTVEKTSQVCMSCDDNTEATGFCVECVEFLCVTCIEAHQRVKFTRDHTIRQK
EEMSPEAVGASSQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRN
HRQHLENMTHQLQEKRKAIEEVSNCINNGLQQVDENRKSVTNEIKKSICNLIMEINRKGK
ILVNQLETLTKDHEVGLKKQQEDVSHLTRHLDHVINFTKWATASHSGTALLYCKRLILCQ
IHYLMRANCNASIVPQSSVRFQCRSGFWASNVDLGSLAVERIPGRQPSSMQQGFPPGHPS
QPGPGPRGEGPPGAFPPGSSAHQRGSTLAQLQLQVEKLAQHPNRAGQPPPNHWSWYQQGL
KLPGPGGPPQQRPHQGGSPSQGPPNMVQIQQPGRSYGPPGPQTHPNPRSPTSMLQNAGFP
PQSLRDLIHNSSFPPKPMDVLQGTSRYSHAPPPNTGPISTQASIHQRNMMEAAQLRRSDP
SGASSSLSMPNPRASYAPSLVTAFPDRHAQGRQNSPMSKSSSEANIGSASWKRTEPNAAA
PPSSAKRRRRSSPGPIIVIKDEPEDDDEVSFVQSSVGASASLPDSSTGIQPKPQPQQQSL
PAPMVEPQPEPQPEPQPEPQPVPQPEPQPEPEPQPETQVELEADPQPDPEKAPGVPEDDP
NEDWCAVCQNGGELLCCDRCPKVFHLNCHIPTLRESPSGEWFCSFCRDLTSPEMEYNPDS
QGELPAMKEEPGSEGFPPVDKRKCERLLLCIYCNEFSTDFQEPASPSSIPEYKELIETPM
DLSIVKSRLESKESPRYCSAEEFVKDVRLIFRNCAKYYQADTEVGGAGLSLEEYFEEQLK
FLYQDRSFPGGREEGMIPPVEDEMEEGMEDDVMAPNEGDMPPVEDDLTPVEEGMPSMEKE
GTEEGMDPVEGEMEEEGIPPLEESMEEEETSPVREDSLPCDATEPVDPSIMGASSPNLSS
KEVPQPLSDTPDNPPCEEAPQPLSDTPDNPPDSQDTSPAAGLATENEGMTEEVRDKAEEE
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagcccagaagctgctgtggacaacgatgaccttgttattatagtggaaaac
gaggcagagagcttgccagctgaagaggagagggcgaaacagctaggaggtagcatcggt
ctcatggacacttgccctgtctgtaagttgaatttccacaatcgagagccgaaacttctg
ccatgcctccactctttctgcaagaagtgtcttccacccccttcaaggaacttagtcaac
agtgaacaacgtcgcgacccgcaacttcaagcggacaactcgaaaccactcaatgtgatc
cgctgcccagtttgtcgacaagagtgctgggaggtggaggtgctggataacttctttgtg
aaggactctgtggaggttcccagcagcacagtggagaagaccagtcaggtgtgtatgagt
tgtgatgacaacaccgaggccacggggttctgtgtggagtgtgtggagttcctgtgtgtg
acgtgtattgaggcccaccagagggttaagttcacaagggatcataccatacggcagaag
gaggagatgtccccagaggctgtgggtgcgtcctcacagaagccagtgttctgtgacatc
cacaagcaggagcccctcaaactgttctgtgagacctgtgaccgtctcacatgcagggac
tgtcagctgctcaagcacaaagaccacaattaccagttccttgaagatgcctacagaaac
cacaggcaacacctggaaaacatgacgcatcagctacaggagaagaggaaagccatagaa
gaagtgtccaattgcatcaacaatggactccagcaagtcgatgaaaaccgcaagtctgtc
accaatgagataaagaagtcaatttgcaacttgatcatggagatcaacagaaagggaaaa
atcttggtcaatcaacttgagacactgacgaaggaccatgaggtcggactaaagaaacaa
caagaagatgtcagccacctgaccagacatctagatcacgtcatcaacttcaccaaatgg
gccacagccagtcacagtggcacagctctcctgtactgcaagagactgattctttgccaa
atccattacctaatgagggccaactgtaacgcatccatcgtccctcagagctcagtccgc
ttccagtgtcgctccggtttctgggcctcaaatgtcgatcttgggtctttggcagtagag
agaatccctggtcggcagcccagttccatgcagcagggcttccctcctggccaccccagc
cagcctggccctggccccagaggagagggccctcccggggctttccctccaggctcctcc
gcccaccagcgtgggagcaccctggctcagctccagctgcaggtagagaagcttgcccag
caccccaacagggctggacagccccctcccaaccactggtcctggtaccagcagggtctg
aagctcccggggccagggggcccccctcaacagaggccccaccaggggggttctccgtcg
caaggtccccccaacatggtccagatccagcagccgggccggagttacggaccccccggg
ccccaaacccatcccaaccccaggagccccacctctatgctgcaaaacgcaggattccct
cctcagtctctgagggatctcatccacaactccagctttcctcccaaaccaatggatgtg
ctacagggtacctctcgctactctcatgcaccccctcccaacacaggacccatcagcact
caagcatctatacaccagcgtaacatgatggaagccgcacaactgaggaggagtgacccc
agtggagcttcatcatcattatccatgcctaaccccagagctagttatgctccgagccta
gttacagccttcccagacagacatgcacaaggaagacagaattcccccatgtccaaatct
tcctctgaagccaacatagggtctgcttcctggaagcgcacagagcctaatgcggcggct
cccccctcctcagctaagcggaggcgaaggtcatcccccggaccaatcatcgtcatcaag
gacgaaccagaggacgatgacgaagtcagctttgtgcagtctagtgttggagcctcagcc
agcctgccagacagcagtacaggcatccagcccaagccccagccccagcagcaatctctc
ccagcacccatggtggagccccagccggagccccagccggaaccccagccggagccccag
ccggtgccccagccggagccccagccggagccggagccccagccagagactcaggtagag
ctagaggcagacccccaaccagacccagaaaaggccccaggtgtccctgaagacgacccc
aatgaagactggtgcgctgtgtgtcagaatgggggagaactgctctgctgtgaccgatgt
cccaaagtcttccatctgaactgtcatatacctacacttagagagtctcccagtggtgag
tggttctgttcgttctgtcgtgacctgaccagtcctgagatggagtataacccagatagc
cagggagaattgccagccatgaaggaggagccaggatcagagggattccctccagttgat
aaaaggaaatgtgagagactgttgctctgcatctactgcaacgagttcagtacagatttc
caggagcctgcctcaccgtcgtcaatcccagagtataaggagctgattgagactccaatg
gacctgtccatagtgaagagcaggctggaatctaaggagagcccgcgttactgcagtgct
gaggagtttgtcaaggatgtcaggctcatattcaggaactgtgcaaagtattaccaggca
gacactgaggtgggaggtgcaggactgagcctggaggagtactttgaggagcagctgaag
ttcctctaccaagacaggagcttccctgggggcagagaggagggcatgataccccctgtg
gaggacgagatggaagaagggatggaagacgatgtgatggctcctaacgaaggggatatg
ccccctgtcgaggacgacctaacacctgttgaagaagggatgccttctatggagaaagaa
ggaactgaagaggggatggatcctgtggaaggagagatggaggaagaagggatacctcct
ttagaagagagcatggaagaggaagagacttctccagtgagagaagactcactaccttgt
gatgctactgaaccagtagatccatcaataatgggtgcatcatctcccaacctttccagc
aaggaggtgccccaacccctctcagatactccagacaaccctccctgcgaggaggccccc
caacccctctcggataccccagacaaccctcctgactcccaggacaccagccctgctgca
ggcttagccacagaaaatgaggggatgactgaagaagtgagagacaaagcagaagaggaa
tga
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