Oncorhynchus masou masou (cherry salmon): 135516165
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Entry
135516165 CDS
T10723
Symbol
arhgef40
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 40
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135516165 (arhgef40)
Membrane trafficking [BR:
omm04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
135516165 (arhgef40)
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Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
DHC_N2
IQ_SEC7_PH
WIT1_2_N
Motif
Other DBs
NCBI-GeneID:
135516165
NCBI-ProteinID:
XP_064796321
LinkDB
All DBs
Position
27:complement(40945879..40983318)
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AA seq
1803 aa
AA seq
DB search
MGSEAVEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDYFIPAKHLLH
KLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSTDFYLQVVPFSTRCPRLA
LKCLAPGGRNVQEVLVPESQHPLVFTTEWLHSVNKERGYKREGGGGLDTCLVSTCDGVVR
LPWEEVVYPKFIHNPSDDLTTMADHPTSVSDHTTDTPVVGLGLGGWGGSSSGEPDSCSWD
EEDDDLPPDSVDAEAVLPRRRCSEDGLGRTTRHHQMAGDGDYVELLEPRGGPDGGADPRQ
RYLEMHGICKTKTLPLCRRSKAIKLRRGKAWGYGRLDAAGGSRGVLGGKRDSVTHRGDWL
PPRPLPRVIDVGRARRSESYPSSLQNSDEGEKQALGKDPEGLGSQGLYFDGPSKERRPGV
GREREGSGCNVTQPCRDSHGSNSLVATETKNPKAAHVVEGQSDQSSRSESVFEDVDKSLS
GDSDTMPTTDTRGSGENAARPLIDIPGNGENVDSPLADGSETQKGRHSTSDSCVPDKTAD
STEHRGTERSLSRPGTDADPKGATTPEERAEGKTEEIGVCPRGKEVKTGGFRAPRRKRKG
RGGKGKAKSGGRGNQKTRDQAGSKPPSKTPQRGPAISPTTNLPITTTNLSEATQQPEGAN
KEVTPVNEGQEKAEIGESNTENQVVQSEVSPDTTTSQSGTSLSNHSTEELVAETSPDLSN
GLSPKAPPLLRELDTELLQSGKLMLTGTVDRLGRAVVVTETHLPEDGCRADEMGRVLACY
HRITRSSAKERGLTVIVDSRQSPPSALCLAALKQLQAVVPGGLGSVLILVEEQHQESSTH
SLEGVEVHTVRGTGVLQQYIDRQQLPLEMDGDYKHCHSDWLAFRLSVESLTECCESALSL
LEDALQSMDTAPLPDCIKTVPLSVEKHRQLMTSILVDQRLTELQRKGGAWLAGLANGTSG
LAKRSPDCRAALAATSNLYDSVDDSLHRLVQVSNQRGSDLEALGRLAAMVDKLEKCEREI
EQIQDQLEDYREPPISLSRLSLKQQKFKTFRESANELHTETLAVLGDLESWSELDWGGLI
EVQVRVPPVRERLRDMSHCLSDCWTTLDNTQRLLSTLTEANQWCDVISSTSPSPSTPLSS
LPPIPPSRFQDARALALELGGGTLLDLWSQTLERYQRTVAQVKPRLLQQAERGQNQGQAR
PKTPSASSLWDLMGPEGEGDWGVGAGGGEGGLQSWGSLASLFRPQTCSTLKIGEEKGNKK
EGTGGGGGGAGGGKFLQNLLHPAKKSPTEAPLPPKPPRKRHPSFDLQALLAPRRAPATTR
PVEPPVGAASRNSPLTWLGRRALTDPVIAAGMAAAVPGWREGGGGGGGGIGGGIGGVQGG
SGVLIRGVEVSSKEVVDYTGTPRQHVLLSRAERETGGERQGTTTAQSKLYLLWCRMLSSE
RQYVAVLKGVEETYLPLLEGPDTPSSLRGKADLLFPKWASLSSFHSQNLLPAMEGALLQS
LLQQDLFSKYREEFLQYSHYIRIKPELDSPLVTQAADFFKLRLPATPPLSPLSFPHCLQA
PTLRLEQYCDALEELGGLNPASDSSLSVLRHVQRHGEDLRASDLIVGCPVPVAERGELVR
QGELLVCGGTRRKKTGVRSVFLYQHLIIFTKQKSPGPGRTAYSFKHSIKTGEMGLTQSVG
EEGVRFEVWVRQAPRIRDCLTLQCQNGEGRAAWTHDIAQLLWTHAIHNTELCLKETMCIG
VSSKILLDATGAPVTSELDSIYNLNDRVHSSCSDSSSVGSQKEGGSPASGRGQTQNQSPS
TAV
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgggctcagaggcagtggaagattgtgtgcagggggctctctcgtccctctaccccccc
ttcgagagcacagccccgcctctcctctctcaggttttctctgtgttagagtcgacttat
cagcatgacagtctgaggtacctgctggattacttcatcccagcaaaacaccttcttcac
aaactacagcagcatgcctgttctcagtatctgggttgtctgttcctccactccggttgg
cccctctgcctcggagagaaggttgtggtccagctctctactctggactggaggctgctg
cgcagtactgacttctacttgcaggtggttcccttctccacacgctgcccccgcctggcc
ctcaaatgtttggcccccgggggccgcaacgtccaagaggtcctggtgcccgagtcacag
caccccctggtgttcactacagagtggctgcacagtgtcaacaaggagaggggctacaaa
agagaaggaggtggagggttagatacgtgtctggtcagtacgtgtgacggggtggtccgc
ctaccgtgggaggaggtggtctaccccaagttcatccataacccatcggacgacctgact
accatggctgaccacccaacctccgtctccgaccacaccaccgacaccccggtggtgggc
ctcggcctgggtggctgggggggctcctcctctggagaaccagactcctgttcctgggac
gaagaagacgatgacctacctccagacagtgtagatgcagaggccgttctaccccgccga
cggtgcagcgaggacgggttagggaggacgacgaggcatcaccaaatggctggtgatggg
gactacgtggaactcctggagcccagggggggtccggacggcggcgcagaccccaggcag
aggtacctggagatgcatgggatctgtaagaccaagaccctgccgctgtgtaggaggagc
aaggctatcaagctccgcagagggaaggcctgggggtacgggcgactggacgcagccggg
ggcagtaggggcgttctggggggtaagagggactctgtgacccaccggggggactggtta
cccccccgccccctgcctagagttatcgatgtaggccgagcgagacggtctgagtcgtac
ccctcctcgcttcagaactctgacgaaggggagaaacaggccctcggaaaagacccagaa
ggcctaggaagccaggggctgtattttgatggtccgtccaaggagaggaggcctggggtg
ggcagggagagggagggcagtgggtgtaacgttacacaaccatgcagggacagccatgga
agtaacagtttggtagcgaccgagacaaaaaatcccaaagcagcgcacgttgtagagggc
caatcggatcaaagctctcgctctgaatctgtgtttgaggatgttgataagtcactgagt
ggagacagcgacaccatgcccactacagacacacgaggaagtggggagaatgcggcgagg
ccattgattgatattccaggaaatggggagaatgtggacagcccgttagcagatggatct
gaaacccagaaaggaagacattccactagtgactcttgtgtaccagacaaaacagcagac
tcgacagaacacagagggacggaacgttctctctctcgacccggtactgacgctgaccca
aagggagcaacaactccagaagagagggctgaaggaaagacggaggagataggagtgtgt
cctcgaggaaaggaagtgaaaacgggaggattcagggcacccaggaggaagaggaaaggg
agagggggaaaggggaaggctaaaagtggtggtcgtggcaaccagaagactcgagaccag
gccggttcaaaaccaccaagtaaaacacctcagcgtggtcccgccatctccccgacaacc
aacctgccaatcactacaaccaacctatcagaggcaacacagcagcctgaaggggcgaat
aaagaggtcacaccagtcaatgaaggacaagaaaaagctgagattggggaaagcaataca
gaaaaccaggttgtccaatcagaagtctcacctgacacaactactagccaatcaggcaca
tccttatctaaccactctacagaggagttagtggcagagacatctcctgacctatcaaat
ggcctatcacctaaagcccctcctctcctaagggaattggacacagaactcctccaatca
ggaaagctgatgttgacaggtacggtggacaggctaggacgggctgtggttgtcactgaa
acgcacctcccagaggacggttgccgtgcggacgagatgggccgtgtcttggcctgttat
cacaggatcacccgctcttctgctaaagagcgaggcctaacagtaatagtagacagtaga
caatctcctccctccgctctctgcctcgctgcactgaaacaattacaggctgtggtcccg
ggaggtcttggctctgtcctcattctggtggaggagcagcaccaggagtcatctacacac
agtctagagggagtagaggtgcacacggtgcgagggacaggggtccttcagcagtatata
gacaggcagcagctgcccctggagatggacggagactacaaacattgccactctgactgg
ctggccttcagactgagtgtggagagtctaactgagtgttgtgagagcgcactctctctg
ttggaggatgcactgcagtctatggacacagcaccactaccagactgtatcaagacggtt
cctctaagtgtggaaaaacacagacagctgatgacgagcatcctagtcgaccaacggctg
actgagctgcagcgcaagggtggggcctggctggcagggctggccaatggcacatcagga
ctggcaaagcggtccccagactgcagagctgctctggctgcgacctctaacctctatgac
agcgtggatgattccctccaccgcctcgtccaggtgtccaatcagaggggcagtgatctg
gaagccctcggacgattggctgccatggtggacaagctggaaaagtgcgagagggagata
gagcagatccaggatcagttggaagactacagggagcctcccatctctctcagcaggctc
tccctcaaacagcagaagttcaagactttcagagagtcggccaacgagctgcacactgag
accctggcggtccttggagatctggagagctggtctgagctggactgggggggactgatt
gaggtgcaggtcagggtacccccggtcagagagagactcagagacatgtctcactgtctg
tctgactgctggacaacactggacaacacacagagactactgtccacactgaccgaggcc
aaccagtggtgcgacgtcatctcctccacctcaccctccccctccacccccctctcctcc
ctccctcccattccaccatctcgttttcaggacgcccgtgccttagccttggagctgggt
ggtggaactctcctggacctgtggtctcagacccttgagagataccaacgcactgtggcc
caggtcaaacccaggctgctgcagcaggcagagcgagggcagaaccagggccaggcccgg
cccaagaccccctccgcctccagtctgtgggacctgatggggcccgagggagagggagac
tggggtgtcggggccgggggaggggagggaggcctccagtcctgggggtccctggcttca
ctgtttcgcccacagacctgctccacgctgaagataggagaggagaaagggaataagaag
gagggaacaggaggaggtggaggaggagcgggaggagggaaatttctgcagaatctgttg
catccggcaaagaagagtccaacagaagctcctttgccccccaaaccgcccaggaagcgt
caccccagcttcgacctccaggctctgctggccccccgtcgggcccctgccaccaccagg
cctgtagagcctcctgtgggtgcagccagccgtaactcccccctcacctggctgggtcgc
cgggccctcacagaccctgttatcgccgctgggatggcagccgccgtccccggatggaga
gagggtggaggaggaggaggaggagggattgggggaggaataggaggggtgcagggggga
tcaggggtgctcatcagaggtgtagaggtgagcagcaaggaagtggtggactataccggg
acgccaagacaacacgtgctgctgagccgagcggagagggagacgggaggggagaggcag
ggcaccaccaccgcacagagtaaactgtacctattgtggtgcaggatgctgagttcagag
aggcagtacgtggctgtattaaagggggtggaagagacctacttgcccctcctggagggt
ccagacaccccctcctccctcagggggaaagcagatctcctgttccccaaatgggccagc
ctcagctccttccactcacagaacctgctcccagccatggaaggagctctactgcagagt
ctgctgcaacaggacctcttcagtaaatacagagaggagtttctccagtactctcactac
atcaggattaaaccagaattggactccccgttggttactcaagctgcggacttcttcaag
ctcagactcccggccacccctcctctctcccccctgtcgttcccccattgtctccaggcc
cctacactgagattggaacagtactgcgatgccttggaagagctgggagggctaaaccct
gcctccgactcctccctctccgtcctcagacacgtccagcgtcacggcgaggacctccgg
gccagcgacctaatcgtcgggtgtccggtcccagtggcagagcgcggagagctggtgcgt
cagggggagctgttggtgtgtggggggaccaggaggaagaagacaggggtgaggagtgtg
ttcctctatcagcacctcatcatcttcaccaagcagaagagtcccggcccaggacgcacc
gcctacagcttcaaacacagcatcaagacgggtgagatgggtctcacccagagtgtgggt
gaggaaggggtaaggttcgaggtgtgggtgcgtcaggcccctcgtatccgggactgcctg
accctgcagtgtcagaatggagaggggagggcagcctggacacacgacatcgctcagctc
ctctggactcacgctatacacaacacagagttgtgtttgaaagagacaatgtgtattggt
gtgtctagtaagatactgctagacgccacaggagcaccggtaacatctgaactcgactct
atctacaatctgaatgacagagtccacagtagctgttcagactcttcctctgttggcagt
cagaaggagggggggtccccagcctctgggaggggacaaacacagaaccagtctccttcc
actgcggtgtaa
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integrated database retrieval system
