Oncorhynchus masou masou (cherry salmon): 135516255
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Entry
135516255 CDS
T10723
Name
(RefSeq) GRB10-interacting GYF protein 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135516255
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135516255
Surveillance factors
Other surveillance factors
135516255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
DUF6033
Motif
Other DBs
NCBI-GeneID:
135516255
NCBI-ProteinID:
XP_064796480
LinkDB
All DBs
Position
27:complement(44337617..44371786)
Genome browser
AA seq
1068 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKENKAPEDM
QDKEFAAILQDEPMQPLALEPLTEEEQRNFSMSVNSVAVMRLMSKGGGVAPAGMARGRGT
TRGGGRGRGRGESGGFYQRSIEEGEVGFGRGAREIYRSQSWDDRGERRFEKPARAREGVR
VGLEEVTGVPVPGVPRKDYTRSDSENWRTLREEQEEVEGADPGGSWRLAAARRLDDGGPR
SAGWREHDGPVEGRRRKFEFDFGGGRRRAGSEGLDDDRDGLPEWCTDEEDGEMGTFDASG
AFLPLSKDEEFDFQGIEEEEESLSGMERIMNGGQRVDVKESASDGEVKNRTSPPSSSAPP
ALGLNPPMPQLSLTVAELEASQMADSHPLPALLPAPAPAPLAVPVPAKASKMPSEVVPEG
SPAEDSTTQQNPSTSSSLPSPPPSVSSSSSAATHLPLPPGGDTEDDEGMKHLQQEAEKMV
ASLQDTSLEEECFTQTLQESRNTASALPLSHDAAMKWFYKDPQAEIQGPFTTLEMYEWFQ
AGYFSMSLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRPPPPRPQPLPPRGPA
GNMDQDRLKKQQQQDLAAAALYQQLQQQQQLFQLINRCGEQGMMPSVNRSMSVPDTGSMW
DMHTSASQQSGGEASLWDLTMNSSTQGPTLEQLQKLQQDRREAELRTKREEEEQRKRREE
KRRQQEEQKRREEEEIFRRKQCRQQQELIMKLLQQAPQQGSGSGVGSGWGTGGLNKPGAK
GLSLLDMQEAERLLKQQQRAQQQQRERHQGMSMGQWGDGGAVPGGLWGGGGGMEGKAGGG
GAMGLWEEAVKNQSRGGSMQGLKNSRSSPSLSEQYMLSRRKQRTDEEDKLLKLLQGIKTP
QDGFTTWCEQMLHALNTQANNTSSPLDVSTIVAYLKEVESPYEVLDFICSYLGDTMEAKE
FAKQFLERRAKQKQNQKRQQEQLSKEVAGLTMNNFPLQDSMRGVNPSALQSMFQAAHMAK
GGMYDAQGGMKKKKQPVMLQSDPSILGYSFHNAGERLSLNEMEMVEDY
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggcccagaatggctccgtgcactatccagtgggggg
agtgtgacgtccccccctccttcccccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagagaacaaggccccagaggacatg
caggataaagagtttgctgctattctgcaagatgagcccatgcagccgctggcactggag
cctctcactgaggaggagcagaggaacttctccatgtctgtgaacagcgtggctgtgatg
aggctcatgagtaaaggaggtggagtcgcccctgcgggcatggcccgaggcagaggcacc
acacgaggaggaggccgagggcgaggccggggagagagtggaggattctaccaaagaagt
attgaggagggagaggtgggcttcggccgcggagccagagagatctatcgcagccagagc
tgggatgacaggggcgagaggcgttttgagaagcctgcgcgtgccagggagggggtacgt
gttggattagaggaggtgacgggtgtacctgtgccgggggtgccgaggaaggactacaca
cggtctgacagtgagaactggcgtaccctcagagaggagcaggaggaagtggaaggggcc
gacccaggaggcagctggagactggccgcagcacgtagattagatgatggaggcccaagg
tctgcaggctggcgggagcacgacggtccggttgaggggcgtcgcaggaagtttgagttt
gacttcggcggaggtcgcaggcgggccgggagtgaagggttagatgacgacagagacgga
ctgcctgagtggtgcactgatgaagaggacggagaaatgggcaccttcgacgcatccggc
gctttccttcccctatccaaggatgaggagtttgacttccaagggatagaggaggaggaa
gagagcctgtctggcatggagaggatcatgaatggaggacagagagttgacgtcaaggaa
tcagccagtgacggggaggtgaagaacagaaccagtcccccctcctcctctgcccctcca
gccctgggcctcaacccccccatgccccagctctccctcacagtggctgagctggaggcc
tctcagatggccgacagccaccctcttcctgctctgctccctgctcctgctcctgctcct
ctcgctgttcctgtccctgccaaggccagcaagatgccaagtgaagtagttcctgaagga
tcaccagcagaggactccaccacccagcagaaccccagcacctcctccagtctgccttcc
ccccctccctctgtctcctcctcctcctctgctgctactcacctccccctgccaccaggg
ggtgacaccgaggatgacgagggcatgaagcacctgcaacaggaggcagagaagatggtg
gcgtccctgcaggacacatctcttgaggaggagtgttttacccagacgctgcaggagagc
agaaacacagcctccgccctgcccctctcccacgacgctgccatgaagtggttctacaag
gacccacaggcagagatccagggtccgttcaccaccctggagatgtatgagtggttccag
gcgggctacttctccatgtctctgctggtgaagaggggctgcgacgagggcttccagccg
ctgggcgatgtcatcaagatgtgggggcgcgtgcctttcgcccccgggccctccccaccg
cccctgctggtgagacctccaccaccgcgccctcagccgctgccaccccggggtcctgct
ggtaacatggatcaggaccgtctgaagaagcagcagcagcaggacttggcagcagccgct
ctctatcagcagctccagcagcagcagcagctattccagctcatcaacaggtgtggagaa
cagggtatgatgccttctgtgaacaggtcgatgtcagtgccagatacagggtccatgtgg
gacatgcatacctcagcttcacagcaatcaggcggtgaagccagtttatgggacttaaca
atgaattcttcaactcagggtccaacactcgaacagcttcagaagctccagcaggatagg
agggaggctgaactcaggacaaagcgcgaagaggaggagcagcgcaagaggagagaggag
aaaaggaggcagcaggaggagcagaagaggagggaggaggaggagatcttcagacgcaaa
cagtgtcgccagcagcaggagctgatcatgaagctgctccagcaggcccctcagcagggc
tcaggctccggggtggggtctggctggggcactgggggcctcaacaagccaggggccaag
ggcctcagtctgctggacatgcaggaagccgagaggcttctcaaacagcagcagagagcc
cagcagcaacagagggaacgccatcaaggcatgtccatgggtcagtggggggacggaggt
gctgtcccagggggcctgtggggaggcggaggggggatggagggtaaggctggaggcgga
ggggccatgggtctgtgggaggaggcggtgaagaaccagtccagaggtggcagcatgcag
ggtctgaagaacagccgcagcagcccctcactcagtgagcagtatatgttaagtcgtagg
aagcagcgtacggatgaggaggacaagctgctgaagctgctgcagggcatcaagacgcct
caggacgggttcaccacctggtgtgaacagatgctgcatgccctcaacacccaagccaac
aacacctcctccccactggacgtgtccaccatcgtggcgtacctgaaggaggtagagtct
ccctacgaggtgttggactttatctgctcctacctgggagacaccatggaagccaaagag
ttcgccaagcagttcctggagcgccgtgccaaacagaaacagaaccagaagaggcagcag
gagcagctatcaaaggaagtagcagggctgaccatgaacaacttccctctgcaggactcc
atgcggggcgtgaaccccagcgcactgcagtctatgttccaggcggcccacatggctaag
ggagggatgtacgatgcccaggggggcatgaagaagaagaaacagcccgtgatgctgcag
tctgaccccagcatcctaggctactcgttccacaacgcgggcgagcgtctgagcctaaat
gagatggagatggtggaggattactga
DBGET
integrated database retrieval system
