Oncorhynchus masou masou (cherry salmon): 135516270
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Entry
135516270 CDS
T10723
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135516270 (fxr2)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135516270 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
135516270 (fxr2)
mRNA cycle factors
Stress granule specific factors
135516270 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF150_C
Motif
Other DBs
NCBI-GeneID:
135516270
NCBI-ProteinID:
XP_064796500
LinkDB
All DBs
Position
27:complement(45131884..45159971)
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AA seq
682 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYHKDIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEVSQGLFYVIEYAACDATYNEIVTHERIRPV
NPNSPSSRNSFHKVPIAIPEDLRNICANDNIHKDFRKAIGANCIFYSAASHELIVLSTNE
TTVKRAALLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVKVREDLMGLAIG
SHGANIQQARKVPGVTAIELEEESCTFRIYGETPEAVKLARVFLEFKEDYFQVPRNLVGK
VIGKNGKVIQEIVDKSGVVRVRIEGDNDKKLPREEVGKQGAGREDTAPKQEGMVPFVFVG
TKENISNAQALLEYHVAYLQEVEQLRLERLQIDEQLRQIGVGYRAPPSRVGGTGPGDREK
GYLTDESSNSTNLHTSRTYGGRGRGRRPSNSQYSGYGTNSEQSNASESEDLNERDQRPRG
VGGDERGSRRGGRGRGSNTGRGRGGPASRTTNSISSVLRDPDSNPFSLLEGESEQGDTDT
SEGVGGVDRRRRSRRRRNDQEPSVMDAAATESDSQVGPNENGLDEEGRPQRRNRSRRRRN
RGNHPEGGSPSRERQPAEVTVADYISRAESQSRQSLPQETLAASEPKENGSSAKKDERMV
PSKRSPSNGMATPSETLVNGVS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggacgggttggcggtggaggttcgcggctcgaacggggccttctacaaggggttcatc
aaagatgtccacgaagactcactcacaatagtattcgaaaacaactggcaaccagagaga
cagctgcccttcagtgacgttcggctgccgcccccagccgactaccacaaggacatcggt
gagggagaggaggtggaggtgtactcgagggccaatgagcaggagccatgtggctggtgg
ctggcccgggtgagaatgatgaagggagaggtgagtcagggactgttctacgttatcgag
tacgcagcgtgcgacgccacatacaacgagatcgtcacgcacgaacgcatccggcccgtc
aaccccaacagcccttcctcccgaaactccttccacaaggtccccatcgccatcccagaa
gacctacggaacatctgtgcgaacgacaacatccataaagacttcaggaaagccattgga
gccaactgcatcttctacagtgcagcctcacacgagctcatcgtgctgtcaacaaatgag
acaacagtgaagcgtgctgctctcctgagcgacatgcacttccgcagcatccgtaccaag
ctcatgctcatgtcccgcaacgaagaagccactaaacaccttgagacaagtaagcagctg
gcgtccgcgtaccaggaagaggtgaaggtaagggaagacctgatgggcctggccattggc
tcccacggtgccaacatccagcaggccaggaaggtgcctggtgtcaccgccatcgaactg
gaggaggagagctgcaccttcaggatctacggagagaccccagaagcggtgaagctggcc
agggttttcctggagttcaaagaagactacttccaggtgcccaggaacctcgtaggaaaa
gtgatcggcaagaacggcaaagtcatccaggagattgtggacaaatccggggtggtgcgg
gtccggatcgagggggacaatgacaaaaagcttccccgtgaggaggtaggcaagcagggg
gctggcagagaagacactgcccctaaacaagagggcatggtcccctttgtctttgtggga
actaaagagaacatcagcaacgcccaggccctactggagtaccatgtggcctacctacag
gaagtggagcagctgcgtctggagcggctgcagattgacgagcagctccgtcagattggg
gtggggtaccgtgccccccctagtcgggtcgggggcaccggccccggggacagggagaag
ggctacctcacagacgagagcagcaactccaccaacctccacacctcccgcacctacgga
ggccgcggacgaggacgcaggccctccaacagccagtactctggatatggtactaactct
gagcagtccaacgcttctgagtcagaggacctcaacgagcgcgaccagcggccccgaggc
gtgggaggagatgagaggggttcccgtcggggtggcaggggccgtggatccaacaccgga
cggggtcgcggaggacccgcctcaaggactaccaactctatcagctcagtgctgagggac
ccagacagcaacccgttctccctgctggagggtgagagtgagcagggcgacacggacacc
agcgagggagtgggaggagtagaccgcaggagacgctcccgccgtcgccgtaacgaccag
gagccaagcgtgatggacgccgccgccacagagtcagacagccaggtcggacccaacgag
aacggactggatgaggagggccgaccccagcgccgcaacaggagccgccgccgtcgtaac
cgcggcaaccaccccgagggaggatcccccagccgtgaaagacagccagccgaggtgacc
gtggcagactacatatcccgcgccgagtcgcagagccgacagagccttccccaggagaca
cttgctgcttccgagcctaaagagaacgggagcagcgccaagaaggacgagcgcatggtg
ccctccaagcgttcccctagtaacggcatggccacgcccagcgagaccctggtcaacggc
gtctcgtag
DBGET
integrated database retrieval system
