Oncorhynchus masou masou (cherry salmon): 135516448
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Entry
135516448 CDS
T10723
Name
(RefSeq) protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
135516448
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135516448
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135516448
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135516448
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Protocadherins
135516448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Y_Y_Y
Mid2
TMEM154
KIAA1549
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
135516448
NCBI-ProteinID:
XP_064796848
LinkDB
All DBs
Position
27:57165332..57331477
Genome browser
AA seq
1029 aa
AA seq
DB search
MRTTGAVDYLCYSILILQLLNQPAAKQVLRYRLAEEGPADVRVGNVAVDLGIVAGSGEVT
FTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
SGESSRRLGSNSGGRGTDRRFDEGAGRSSVFELQVADTTDGEKQPQLIIKGALDREQRDS
YELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKAVYEADLPENSSPGAPILQLKAA
DADVGVNGQIEYVFGAATESVRRLLRLDESSGWLSVLHRIDREEVSQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEIEGEMNKKKYFLHTSAPLDYEATQEYNVVIVAVDSGSP
SLASNNSLIVKVGDFNDNPPIFSQNVVEVSFPENNAPGERVITVQAIDADSGKNAEIAYS
LDSSVNGIFSINADNGDIRVNTILDREQTERYQFKVIAKDKGMPILQGSATVVVLVADKN
DNEPKFMQDVFTFYVKENLTPNSPVGMVTVIDADKGQNAEMSLFVEEEEEIFSIENDTGT
IFSTMSFDREQKTTYTFRVKAVDSGDPPRSATATVSLFVMDENDNPPTVTFPINSSYTLL
PPSSNVRTVVRTVMATDTDTGINADLNYSIIGGNPFKLFEIDGGSGVISLVGKLEQKHYG
LHRLVVQVNDSGQPSQSTTTMVHVYVNETLSNSTIVEAQVAKSLGTPLNTNIAGDPNYDL
GKQRLSIVIGVVSGIMTVILIILIVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKGKK
PKKNKKNKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDLARHY
KSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTINKYN
KQTPGPCLT
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaggactactggcgcagtggactatttatgctacagtatactcatcctgcagctgctg
aatcagcctgctgctaagcaagtgctccgatatcgcttggctgaggagggacccgcggat
gtcagggtagggaacgtagccgtggacctcggaatcgttgccgggtctggcgaggtgaca
tttaccctcgagtccggatcagattttttcaaaatagataatataacaggcgagctgacc
accaatgaacggcggatagaccgtgaaaaattacagcagtgtcaaatgatatttgatgaa
aacgagtgtttcatagattttgaagtgtcagtaattggaccggcgcagagctgggttgac
ctgttcgaggggaaagtcattattttagatataaatgataacactccgtctttcccatct
cctgtgctgaccctatccgtggaggagaacaggccgattggcactctctatctcctaccc
acggccaccgacagagatttcggtaggaacggaattgagagatatgagcttattcaagac
agcggggagagctccaggcgcctgggctccaactcaggtggtcgcgggactgacaggaga
ttcgacgagggggcaggcaggagcagcgtctttgaactgcaagttgctgacacaaccgac
ggggagaagcagccgcagctcatcattaaaggggcactggacagggagcagagggactct
tatgagctcaccctgcgtgttagggatgggggcgaccccccgcgctcctcccaggccatc
ctgagggtgatgatcactgatgtgaatgacaacagcccccgctttgagaaggctgtgtat
gaagctgacctgccggagaacagctcccctggtgcccccatcctgcagctgaaagcagct
gacgcagacgttggggtgaacggtcagattgagtatgtattcggcgcagcaacagagtca
gtgcgtaggcttttgaggctggatgagagctctgggtggctgagcgtgctccatcgtatt
gaccgcgaggaggtgagccaactgcgctttactgtgatggcgagggaccgaggccagccg
cccaaaatggacaaggccaccgtggttctcaacatcaaggatgagaacgacaacgtgcca
gctatcgagattcgtaagatcggacgcatcttcctgaaggatggagtggccaacgtggct
gaggatgtagtggtggacacgcctatagctttggtccaggtgtcagaccgggaccagggc
gagaacggaatcgtgacctgcactgtggtgggtgacgtgcccttccagctcaaaccggcc
agtgagattgagggtgagatgaataagaagaaatacttcctccatacatcagcgccgctg
gactacgaggccacacaggagtacaacgtggtcatcgtggcggtggactcaggaagccct
agcctggccagtaataactcgctcatcgtaaaggtgggcgacttcaacgacaacccaccc
atctttagccagaacgtggtggaggtgtcctttccagaaaacaatgcccccggcgagagg
gtgatcactgtgcaggccatagatgctgatagtggcaagaacgcggaaatcgcctactcc
ctcgactcctctgtgaatgggatattctccattaatgccgacaacggtgacatcagagta
aacaccattctggacagagaacaaacagagaggtaccagttcaaagtgatagctaaagat
aagggcatgcctatactccaggggtcagccactgtggtagtcttagtggctgataagaac
gacaatgagcctaagttcatgcaggatgtgttcaccttctacgtcaaagagaaccttaca
cccaacagcccggttggcatggtgaccgtcattgacgccgacaaaggccagaacgcagaa
atgagcctcttcgtcgaggaagaggaggagatcttctccattgagaacgacacaggaacc
attttctccaccatgtcgtttgaccgcgagcagaaaaccacctacacgttccgggtcaag
gctgtggacagcggagacccacccagatccgccactgccaccgtgtcgctcttcgtgatg
gacgagaatgacaacccgccgaccgttaccttccccatcaatagctcatacaccctcctg
cccccctccagcaatgttaggactgtagtacgaactgtcatggccaccgataccgacact
gggatcaacgctgacctaaactacagtatcatcgggggcaaccctttcaaactgtttgag
attgacgggggaagtggggtcatctcactggtggggaagctggagcagaaacactatggc
ctccacagactggtggtccaggtgaacgacagtggccagccctcgcagagcaccaccacc
atggtgcacgtctatgtcaacgagaccctctccaactccaccatcgttgaggcccaggtg
gctaagagcctgggcactccgctcaataccaatatcgccggtgaccccaactacgacctg
ggcaagcagcggctgagcattgtcatcggcgtggtgtcgggcatcatgacggtaatcctc
atcatcctcatcgtggtcatggctcgctactgccgccccaagaacaagaatggctacgag
gcgggcaagaaggaccacgaggacttcttcacccctcagcagcatgacaagggcaagaag
cccaagaagaacaagaagaacaaacagccgttgtacagtagcattgtcaccgtcgaggcc
tccaagcccaacggccagcgctacgacggcgtcaacgagaagctgtccgacagccccggg
atgggcaggtaccgctccgttaacggagggcccggaagcccggatttggcccggcactac
aagtccagctcgccactgcccacggtccagctccacccccagtcgcccacggccgggaaa
aagcatcaggctgttcaggacctgccccctgccaacaccttcgttggcaccggagataac
atttcccttggatctgaccactgctccgagtacagcagtcaaaccatcaacaagtacaac
aaacagacacccggaccttgcctgacgtag
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integrated database retrieval system
