Oncorhynchus masou masou (cherry salmon): 135516575
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Entry
135516575 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: exportin-T-like
KO
K14288
exportin-T
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135516575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omm03016
]
135516575
Transfer RNA biogenesis [BR:
omm03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
135516575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-T
Xpo1
IBN_N
Thump_like
OrgC
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
135516575
NCBI-ProteinID:
XP_064796998
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All DBs
Position
27:9341245..9400144
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AA seq
916 aa
AA seq
DB search
MACQSVSIINMDEQALLGLNPNADACYRQKAMVYFEQLKESQDAWEVCAEALAKGIYSDD
HVKFFCFQVLEHQIKYRHGGLSPAQQQLIRETLMKWLQGQLMNSQPEKPFIRNKAAQVFA
LTFVMEYLTHWPKFFYDLLSLVGLNPHGVDVYLRTLMAIDAEVVDRDILHSPEEVRRNTL
IKDGMREQVIPSLVESWYQILGAYQQSHPEITCQCLEVVGAYVSWIDLNLIANDRFVNLL
LSQMSVEDLREEACDCLFEIVNKGMDPTDKTKLVESLCQVLQSAGFFNVDQEEDVDFLAK
FSRLVNGMGQSLVLSWTKLAKGGDVKEAAEALRALETKVPLLLQLLVHDDDDISANIVGF
CYDYLNVLKQGSEWQSNMRQVGRGGQEAIEEYWDSDKFPLLTDQQKTHVEDIMLAVMKKL
TYDEEYNFDNEGEDEAMFVEYRKQLKMLLDRLAQVSPDLLLEAVGRVFNNTIQRWQTASF
MEVEVAVRLLYMLGEALPASHGAHFSGDTAKTSALQDMMRTLVSSGVSGYQHTSVSLEFF
ETVVRYDKFFLVEPQHIPNVLMSFLDHRGLRHSSPKVRSRVAYLFSRFVKTLHRTSKAFS
NKQTVKQCGCTEVYRDCLQTFLPALSCPVQRGSLRSAVRSFLHRMIICLEEEVLPFVPAA
SEHMLKDCEAKDLQEFIPLISQITAKFKVTRDLQEFIPLISQITAKFKDQVSPFLQQVFM
PLVLAIFEVLCRPAEDNDQAAALEKQMLRRSYFTFIQTITSSGMNEVLANQGVENVERVL
FTIIQGAVDMXDPIAQKTCFIILSKLVELWGGKDGMAGFPDFIYKHIVPACFLAPLKPSF
DLTDAQTVLTLSECALTLKMIHLRRGPEFIQYLQQEYLPSLQVSPEITQEVCQVLQQPDA
KVLKNYMKAFFQRAKL
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggcctgccagtctgtctccatcatcaacatggacgagcaggccctgctggggctcaac
cctaacgcagacgcctgctataggcagaaggcgatggtgtattttgagcagttgaaggag
tcccaggatgcctgggaggtgtgtgcagaggccctggcgaaaggcatttacagtgacgac
catgtgaagttcttctgtttccaagtcctggagcaccagatcaagtacagacatggaggg
ctcagtcctgcccagcaacagctgatcagagaaaccctgatgaagtggctgcagggtcag
ttaatgaactcccagccagagaagccgttcatccgtaacaaggcagcccaggtgtttgct
ctgaccttcgtgatggagtacctgacccactggcccaagttcttctacgacctgctgtcc
ctagtgggcctgaacccacacggggtcgacgtctacctcagaacactgatggctatcgac
gctgaggtggtggacagagacatcctgcactcccctgaggaggttcgtaggaacacatta
ataaaagatggtatgagggagcaggtcattcccagcctggttgagtcctggtaccagatc
ctcggggcctatcagcagtctcaccctgagatcacctgtcaatgtctggaggtagtgggg
gcatacgtctcctggatagacctcaacctcatcgccaacgacaggtttgtgaacctgctg
ctgagtcagatgtctgtggaggacctgagagaggaggcgtgtgactgtctgtttgagatt
gtcaataaaggaatggacccgacagacaagaccaagctggtcgagtccctctgtcaggtc
ctgcagtcggcgggcttcttcaacgtggaccaggaggaggatgtggacttcctggccaag
ttctccagactggtgaacgggatgggccagtctctggtgctgagttggaccaaactggcc
aaggggggcgacgtgaaggaggccgccgaggcgctgcgtgccctcgagaccaaggttcct
ctgctcctccagctgttggtccacgacgacgatgacatctcagccaacatcgtaggcttc
tgctacgactacctgaacgtactcaaacaggggtccgagtggcagagtaacatgcgtcag
gtagggagaggaggacaggaggccattgaagagtactgggactcagacaagttcccgctg
ctgacagaccaacagaagactcacgttgaggacatcatgttggccgtcatgaagaaacta
acttatgatgaagagtacaactttgacaacgagggggaggatgaagcgatgtttgtagag
tacaggaaacagttgaagatgctgttggatcgcctggctcaggtgtctcctgaccttctc
ctggaagctgtgggcagagtcttcaacaacaccatacagcgttggcagacggcgtccttc
atggaggtggaggtggccgtcaggctgctgtacatgctaggagaggctctgcctgcgtct
cacggagctcacttctctggcgacacggccaagacctccgccctgcaggacatgatgaga
acgctggtctcctctggtgtcagtggttaccaacacacgtctgtgtcgctggagttcttt
gagacggtggttcgttacgacaagttcttcctggttgaaccgcagcacatcccgaatgtc
ctgatgtcctttctggaccatcggggtctgagacacagcagtcctaaggtccgtagcaga
gtggcctacctcttctcacgattcgtcaagactctgcatcgtaccagtaaggcgttcagc
aacaagcagacagtgaagcagtgtggatgtactgaagtctacagagactgtctgcagacc
ttcctgcctgcactgagctgtcctgtccagagggggtctctgcgtagcgctgtccgctcc
ttcctccaccgcatgatcatctgtctcgaagaagaggtcctgcccttcgtccctgcggca
tcggaacacatgctgaaggactgcgaggccaaggacctgcaggagtttataccactcatc
agtcagatcactgccaagttcaaggtaaccagggacctgcaggagtttataccactcatc
agtcagatcactgccaagttcaaggaccaggtctctccgttcctgcagcaggtgttcatg
cctctggtcctggccatctttgaggtgttgtgtcgacctgctgaggacaacgaccaggca
gcagctctggagaaacaaatgttacgtagaagctacttcaccttcatacagacgataacc
tccagcgggatgaatgaagtcctggccaaccagggtgttgagaacgtagagcgggttctg
ttcaccatcatccagggagctgtcgatatgnttgaccccatcgcccagaagacctgcttc
atcatcttgtccaagctggtggaactctggggaggtaaagacggtatggctggtttccca
gacttcatctataaacacatcgtcccagcatgcttcctggctcctctcaaaccgtccttt
gatctcacagacgctcagaccgtcctgacgttgtcagagtgtgctctgacgttgaagatg
attcatctcagaaggggtccggagtttatccagtaccttcaacaggagtacctcccttct
ctacaggtgtcgcccgaaatcacacaggaagtgtgtcaagtgcttcagcagccagacgcc
aaggtcctcaaaaactacatgaaggctttctttcagcgagccaaactgtaa
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