KEGG   Oncorhynchus masou masou (cherry salmon): 135517077
Entry
135517077         CDS       T10723                                 
Name
(RefSeq) WD repeat-containing protein 7-like
  KO
K24738  rabconnectin-3b
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:omm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    135517077
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omm04131]
    135517077
Membrane trafficking [BR:omm04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    135517077
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz ASA1 Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_ACSF4 Beta-prop_EML WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd CFAP251_N Beta-prop_WDR41 ANAPC4_WD40 Beta-prop_VPS8 DSE1_N Beta-prop_IFT140_1st Beta-prop_DCAF12 PAC11 WDR72_alpha-sol Beta-prop_Aladin Beta-prop_SCAP Beta-prop_pof12
Other DBs
NCBI-GeneID: 135517077
NCBI-ProteinID: XP_064797171
LinkDB
Position
28:complement(82394319..82504749)
AA seq 1184 aa
MKLMHLGKIKVMFRRLRSALTETTHECIIRSTEKMSGNSLVLPIVLWGRTAPTHCISSLL
VMDDLATIITGCHDGQICIWDMTSDLEISPRAMLFGHTASITCLSKASPCSDKQYIVSAS
ESGEMCLWDVNDGRCIEFTKLACAHTGIQFYQFTIGTQREGRLLCNGHYPEILVVDATSL
EVLYSLVSKISPDWISSMSIIHSHRTQEDTVVAVSVTGILKVWIITQDVNRMQDLDPVFE
EESKPIYCGGCQSISFCTFTQLSLLVVCSKYWRVFDAGDYSLLCSVPSENDQSWTGGDFI
AADKIIIWTEDGCSYIYKLPASCLPASEHFRTDVGKTAEGSIPPLVYSIADRTDKQLLIC
PPVTRFFYGRREPFHKLLVQGDSAGRLTLWSIPDTSPLQPLSTAAELQVSSTISLQEAFD
KLAPLSAGIIDQLSVTPGSEEPIKVTASVYIPSQGRLVCGREDGSIILVPATQTAIVQLL
QGEHMLRRGWPPHRTLRGHHNKVTCLLYPHQVSPRYDQRSLVSGGVDFSVIVWDIFTGEM
KHVFCVHGGEITQILVPPENCSNRVQHCVCSVASDHSVGLLSLRERKCIMLASRHLFPIQ
AIKWRPCDDYLVVGCSDGSVYVWQMDTGALDRCVMGITAVEILNACDEVVPAAVDALSHP
AVNLKQAMTRRSLAALKNMATHKLQTLATNLLAADNADKGNLQKYSNNSLVVQAMKTNLT
DPDMHVLFFDVESVIIQLLTEEAQRPNPTLVSPETLQKAQGAADKGGSFLANKIFKQVKE
TMKETIKEHLLDEDEEEEEEMRRREEKSKSLSLLEYNLTMDTAKLFMSCLHAWGLNGPLD
EVCLSRLGMLKPHCPISFGLISRGGHMSLMLPTFKESLLRQMALSTGRKLSLSEMVGKGT
YGVSRAVTTQHLLSVISLANTLMGMTNATFVGEHMKKAPVRPPRPGTPETPKKTAAPPQV
SSPAVQGQIKQGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEVREAAQALL
LAELRRIGQSGRKDTIDLWAPYLPQYVDQVSSRKWGDGCGGRGAGGGPRCGAGGRVWGLG
CGAGVGGRVWGPGSDVIDGIKRSQASRRRRFPDVTVTPLPRRHGDAASPTSRRRRFPDVT
ATPLPRRHGDAASPTSRRFPDFTVWLYVSIQRVVLSQCRYDVWF
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgaagttgatgcatcttgggaagataaaagtgatgtttcgcaggctgaggtctgctctg
actgagacaactcatgagtgtatcataaggtcaacagagaaaatgtcaggaaacagcctg
gttttacccatagtgctgtggggccggacggcgcccactcactgcatctccagcctgctg
gtcatggatgacctcgccaccatcatcaccggctgccacgatggacagatctgcatttgg
gatatgacctccgacctcgagatcagtcccagggccatgttgtttggtcacacagcctcc
atcacctgcctgtctaaagccagcccctgcagtgacaagcagtacatcgtcagcgcctca
gagagtggggagatgtgcttgtgggatgtcaacgatggacgctgtattgagttcactaag
ctggcctgcgctcacaccgggatccagttctaccagttcaccatcggtacgcagcgtgag
ggtcgtctgctgtgtaatggacattacccagagatcctagtggtggacgccaccagcctg
gaggtcctctactccctcgtctctaagatctctcctgattggatcagctccatgagcatc
atacactcacatcgcacacaagaggacacagtggtggcagtatcggtcactgggatactg
aaggtgtggatcatcactcaggatgtcaacagaatgcaggatctggatccagtgtttgag
gaggagtctaagcccatctactgtgggggctgtcagagcatctccttctgcaccttcaca
cagctctctctgctggtggtctgctccaagtactggagggtgtttgatgcgggggactat
tccttgctgtgctcagtgcccagtgagaacgaccagtcgtggaccggaggagacttcatc
gccgccgacaagatcatcatctggaccgaggacggatgctcctacatctacaagctcccc
gccagctgcctgcctgccagtgaacacttccgtactgatgtaggaaagactgccgaaggc
tccatcccacctctggtgtacagcatcgcggaccgtacagacaaacagctcctcatctgt
cccccggtgacacggttcttctatggccgccgggagcccttccacaagctgctggtccag
ggagattcagccggacgcctcaccctctggagcatcccagacacctcgcccctgcagccc
ctctccaccgcagcagagctccaagtgtcctccaccatctccctccaggaggcctttgac
aagctggctcccctgtcggcgggcatcatagaccagctgagtgtgacgcccgggtcggag
gagcccatcaaggtgacggccagcgtctacatcccctcccagggcaggctggtgtgtggc
agagaggacggaagcatcatcctggtccccgccacgcagaccgccatcgtacagctgctg
cagggagaacacatgctgcggagaggctggccccctcaccgcaccctgcggggtcaccat
aacaaagtgacgtgcctgctgtacccccaccaggtgtcccctcgctacgaccagcgctcg
ctggtgtccggcggtgtggacttcagcgtcatcgtctgggacatcttcactggggagatg
aagcacgtcttctgtgtccacgggggggagatcacacagatcctggtcccgcctgagaac
tgcagcaatcgtgttcagcactgtgtgtgctctgtggccagtgaccactccgtgggtctg
ctcagcctgcgggagaggaagtgcatcatgctggcgtctcgacacctcttccccatccag
gccatcaagtggcggccctgtgatgactacctggtggtgggctgctctgatggctcagtg
tatgtgtggcagatggacacaggtgcgttggaccgttgcgtgatgggcatcacggctgta
gagatcctgaatgcgtgtgacgaggtggtgccggccgctgtggacgctctaagccaccct
gcggtcaacctgaaacaggccatgacacgacgcagcctggccgcgctcaagaacatggcc
acgcacaaactacagaccctggctaccaacctactggctgcagacaacgcagacaagggc
aacctacagaagtactccaacaacagtctggtggtgcaggccatgaagaccaatctgaca
gaccctgacatgcatgtcctgttctttgacgtggagtcggtgatcatccagctgctgact
gaggaggcccagcggcccaaccccaccctggtctcccctgagaccctccagaaggcccag
ggagcagccgacaaaggagggtccttcctcgctaacaagatcttcaaacaggtgaaggag
acaatgaaggagaccattaaggagcacctcctggatgaagacgaggaggaagaggaggag
atgaggagacgcgaggagaagtctaaatctctgtctctgttggagtataacctgactatg
gacacggccaaactgttcatgtcctgtctccacgcctggggcctcaacggaccactggac
gaggtgtgtctgagcagactgggcatgctcaaaccccattgccccatctccttcggtctc
atatcccgaggaggtcatatgtctctcatgctgcccaccttcaaggagtccctgctgcgt
cagatggccctgtccacgggcaggaagttgtccctgtcagagatggtgggtaaagggaca
tacggagtgtcccgggccgtgactacccagcacctgctctctgtcatctcattggctaac
accctgatgggcatgaccaatgccaccttcgtgggagaacacatgaagaaggcacctgtc
aggcctcctagacccgggacccctgagacccccaagaagactgcagcacccccccaggtg
tctagtccggccgtgcagggacagatcaaacaaggttggagccagctggctgctatgcac
tgtgtgatgctgcctgacctgctgggcctggacaagttcagaccacctcttctggagatg
ttggctcgccgctggcaggaccgctgtctggaggtgagggaagcggcccaggccctgctc
ctggctgagctgcggaggattggtcagtcaggcaggaaggacaccattgacctgtgggcc
ccctacctgccccagtacgtggatcaagtcagctcacgtaagtggggggacgggtgtggg
ggccggggagcgggtggggggccgcggtgtggggccggggggcgggtgtgggggctgggg
tgtggggccggggtggggggacgggtgtgggggccggggtcagatgttattgatggaatc
aagagaagccaggcgtcacggcgacgccgcttccccgacgtcacggtgacgccgcttccc
cgacgtcacggcgacgccgcttccccgacgtcacggcgacgccgcttccccgacgtcacg
gcgacgccgcttccccgacgtcacggcgacgccgcttccccgacgtcacggcgcttccct
gacttcacagtatggctgtatgtgtctatacaacgtgtggttctaagccagtgtcgatac
gacgtgtggttctaa

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