Oncorhynchus masou masou (cherry salmon): 135517127
Help
Entry
135517127 CDS
T10723
Name
(RefSeq) guanine nucleotide exchange factor VAV3-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04517
IgSF CAM signaling
omm04519
Cadherin signaling
omm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135517127
04519 Cadherin signaling
135517127
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135517127
09142 Cell motility
04810 Regulation of actin cytoskeleton
135517127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_2
CAMSAP_CH
SH3_1
CH
SH3_9
SH2
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
Prok-RING_1
zf-RING-like
C1_2
SRA1
LZ3wCH
Motif
Other DBs
NCBI-GeneID:
135517127
NCBI-ProteinID:
XP_064797227
LinkDB
All DBs
Position
28:complement(7261594..7490892)
Genome browser
AA seq
841 aa
AA seq
DB search
MEFWRQCVLWLINCKVLPPDHRVTWESAQLFDLAQTLRDGVLLCQLLNNLRAQSINLKEI
NLRPQMSQFLCLKNIRTFLAACCEIFGMKKTELFEAFDLFDVRDFGKVMDTLSKLSSTTI
SEQTGIKPFPSEESLEEDEDIYSHLVDLIDEKAVEDEEDLYDCVYDDEDGGEIYEDLMKA
EAVPPPLKQVETDIRSCCLTEIKQTEEKYTETLDSIEKYFMAPLTTFLSSEEMEKVFVNI
PALVKVHKTLNVAIQDSVCHRSAQNLYQIFINYKERLLIYGKYCSHVETAIIALDVICKD
REDVRMKLEECAKRANHGKFTLRDLLVVPMQRVLKYPLLLQELVKHTHDAGDKSNLRMAL
DAIKDLAQYINEVKRDNETLRDIAQYQKSIENLNQSLSVYGRPKGDGEVRFTSGDKRAKQ
DRHIFLFDAAVILCKRRGDNYEMKEVITLYHFKITNNPTSDKETRKWSYGLYLAHDQGQS
GFEFFFKTKELRKKWLEQFGMAISNIRPENGTSNSHEFKMHTFDRITSCSYCHMLLRGIF
NQGYLCSKCGIGAHKECLGRFGGCGKTDPGALKTQEKPVHGRRSDPGLPKMLVTRNYFGV
PSPMCGPPLNIQQGDIIELVCADLHSTWWQGKVVKTREVGFFPSSAVKPCPCVPKPVDYS
TQPWFAGPMERLQAEAELISRGNSTYLVRHRSRELTEYAISIKYSNDVKHIKILNRDGCF
HIAENNKFGSILELIEYYQHYSLREGFRSLDTTLQFPYREQESPAAMLCTNKPGGNMYTP
KVIGVAKARYDFSSRDTRELSLQEGDVVKIYTKSGANGWWRGVVNGRVGWFPSTYVEEGE
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggagttttggaggcagtgcgtattatggctgatcaactgcaaggtgcttccacccgac
catcgggtaacatgggagtccgcccagttattcgacctggctcagacactccgagatgga
gtgctcctgtgtcaacttctcaacaacctccgagcccagtccatcaacctcaaagagatc
aacctccgacctcagatgtcacagttcctgtgcttgaagaacatccggacgttcctcgcc
gcatgctgtgagatatttggcatgaagaagactgaactctttgaggccttcgacttgttt
gatgtgcgggactttggaaaggttatggacacattgtccaaactgtccagcacaacgatt
tcagaacaaactggtataaagccctttccttcagaggagagtctagaagaagatgaagac
atctatagccatctggtggatctgattgatgagaaagctgtggaggatgaagaggatctg
tatgactgtgtctacgatgatgaagatggtggtgagatctacgaagatctgatgaaggct
gaggctgttcctcctcctctgaagcaggtagagactgacatcaggagctgctgtctgaca
gagatcaagcagactgaggagaagtacacagagactctggattccatagagaagtatttt
atggcacctcttaccaccttcctgtcctcggaggagatggagaaggtgtttgtcaacatt
ccggctctggttaaagttcacaagactctgaatgtggcgatacaagactctgtctgccat
agaagtgcccagaacctctaccagatcttcattaactacaaagagaggttgctaatatat
gggaaatactgtagccatgtagaaacggccatcattgctttggatgtcatctgcaaggac
agggaagatgtccgaatgaagctggaggaatgtgcaaagagagccaaccatggcaagttc
acactgagagatctgctggttgtcccgatgcagcgggtactaaagtatccccttcttcta
caggaattagtgaaacacactcacgacgcgggtgacaagagcaatttgcggatggccctg
gatgccataaaggacctggcccagtacatcaatgaagtgaagagagacaacgaaaccctg
agagacatagcccagtatcagaaatccattgaaaaccttaatcagtctcttagtgtgtat
ggcagaccgaaaggagatggagaggtacgcttcacctcaggcgacaaacgtgccaaacag
gaccggcacatcttcctgttcgatgctgctgtgatcctctgtaagaggagaggagacaac
tacgagatgaaggaggtgatcaccctgtatcacttcaagatcactaacaaccccacgtca
gacaaggagaccagaaagtggtcctatgggctctacctagcacacgaccaggggcagagc
ggcttcgagttcttcttcaagaccaaggagctgaggaagaagtggttggagcagtttggc
atggccatatccaacatccgtccggagaacggcaccagtaactcccacgagttcaagatg
cacacctttgacagaatcacatcctgcagctactgccacatgctgctaaggggcatcttt
aaccaggggtacctgtgctccaagtgtggtattggagcccataaggaatgtctggggagg
tttggtggctgtggaaaaacagatccgggcgccttgaaaacacaggaaaaacccgtgcac
ggacggcgctcagatccaggtctacctaagatgttggttaccaggaactatttcggcgtg
cccagtcccatgtgtggtccgcccctcaacattcagcaaggtgacatcatcgagctcgtc
tgtgctgatctacacagcacttggtggcagggcaaagtcgtgaaaacaagagaagttggc
ttctttccaagcagtgccgtgaagccgtgcccatgtgtccctaaacccgtcgactactcc
acacaaccctggtttgctgggcccatggagagactgcaggctgaggcagagctgattagc
agaggcaacagcacttacctggtccgccaccggagccgcgagctcacagagtacgccatc
agcatcaagtacagcaacgacgtgaagcacatcaagatcctgaacagggacggctgcttt
cacatcgcagagaacaacaagttcgggagtatattagaactgattgagtactatcaacat
tactccctgagggaaggcttccgaagcctggacaccacactgcagttcccctacagagag
caggagagccccgctgctatgctctgcaccaacaaacctggaggaaacatgtacacccct
aaggtgataggtgtggcgaaagcccgctatgacttcagctccagggacaccagagagctg
tctctacaggagggagacgtggttaagatctacaccaagtcaggagccaatggctggtgg
aggggagtggtcaacggcagggtgggctggtttccatctacctatgtggaggaaggagag
gaatga
DBGET
integrated database retrieval system
