Oncorhynchus masou masou (cherry salmon): 135517238
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Entry
135517238 CDS
T10723
Name
(RefSeq) uncharacterized protein LOC135517238
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135517238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135517238
Membrane trafficking [BR:
omm04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
135517238
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
135517238
NCBI-ProteinID:
XP_064797430
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All DBs
Position
28:complement(14978834..15009016)
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AA seq
1305 aa
AA seq
DB search
MRRAGQSDAALSTSNDSLSCRDGSSTDPDLQPRAWPRPLGELYPTQGHVERAAPPSLLSG
CGAQVQLVTYDPHNEERRLNGLNTDTWSSQVIGHPEMKPYPSRIMRLFSTQRKCTVPGDS
PGTTRPLSFQGPQSSAGGPQAWPVLSGLAVMGSFKKLRSSVLQGIQNRGTANPDGEYISA
ANQGECNGMVTNNQSLRLRCGEGYSVSSRVSIGQQVAGMSPYSSENEEEEVDKEDGLQRN
TRFSRSIQRAYGAGRISLLDTGQNGERGEGPGQGVSSNQRPGLGSSSGSEVNLHSEESVN
VLSRLTKSADNLHLKAPFRRKAPSPSPNDSPGTSGSVVANVGPSIQRSASASSVDLRDRS
QSPGRLRSPLGARGHMLKLVGSMTDLTVRRRSNLSPVTCPGSPVTPLSPLSRLHDDYSRR
TPCLPAGNRQRRPSPARTRNVTLVSLEHTPTIHPHLHRRHDHVFSFPTNSEPLATTSSPL
RSSLCEGGRPQEGRGDGWRALCDSTPLPQGEPCESHSKHQPEVNAEVKTAPKQCIWTRPD
QDQEELEDTSDEQGREALLGGEEAPSPSATGTILTPTCSQDSPTSPMATGATETSTSVTP
RRRAGRSRPRPISDYAQLVARKYAIPEEEAELHPEERITNGTPCQDFKSNGGSQDSDSQE
NYNMNGDLRCRRRRPMSVIGGVDLYSSPGAEEREDRLPSPLSRPPVPSHQVPSYRAVSAR
FRPSTFSQSTPIGLDRLGQRKLHRVLSDGGSECCAAVDGDSVSEEEGSFDELSDVTTYLQ
PGVGLSALSQWISQGQAVYAEALWDHVTMEEQELAFKAGEVIRVLEAPHKDWWWGMGADK
EAWFPSSFVRVRVNQEEDSGAESVERCALDQENPHTAPRDTHSAEHRHQMRTNVVKEIMN
TERIYIKHLRDICEGYIRQCGKNPGMFTELQLKTIFSNIEDIYKFQRQFLKDLERKYNTD
QPHLSEIGACFLLQGEGFSIYSEYCNTHPAACGELQRLMKLGRYKHFFEACRLLQQMIDI
SIAGFLLTPVQKICKYPLQLGELLKYTPKDHSDYGGVSDAYEAMKNVASLINEGKRRLES
VDAIAHWQVAILRWEGADVLERSSELIHSGELTRIVCQGNKTQQRSFFLFDHQLVFCKKD
VLRRDLLYYRGRLDMDHTELLEMPDGKDPELGISLKNALWLRNSSTLETLCYLCCRKPQD
RQRWLQAFARERRRVQEDQEMGMKISETQRKQAIFNARKSRQGKIKTMGYSGNVPPHHQP
LHPIHQRHVTVPTSVPQQQVFTLAEPKRKPAHLWYTFTRHTFFRK
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgagaagggcggggcagagcgatgcagccctgtctaccagcaatgactccctctcctgt
cgcgatggctcctccaccgaccctgaccttcaacctcgagcctggccccgacccctcggc
gaactttaccctacccagggtcacgtggagagggcggcgcccccgtccctgctgtctggg
tgtggtgcccaggtacagcttgtgacctatgacccccacaatgaggagaggagactgaac
gggctcaacacggacacctggtccagccaagtgataggccaccctgagatgaagccctac
ccctccaggatcatgaggctcttctctacccagaggaagtgcaccgttcctggggacagt
ccgggcacaaccaggcccctctccttccagggtcctcaatccagtgccgggggcccgcag
gcttggccagtcctgtcagggcttgccgtcatgggctcctttaagaagctgcgctcctca
gtgctccaaggcattcagaaccgagggacagctaatccggatggggagtacatctcagca
gccaaccagggtgaatgtaatggaatggtcacaaacaatcagagcttaagactgaggtgt
ggggagggctatagtgtgtccagtagggtgtctattggccagcaggtggctgggatgagc
ccttatagttctgaaaatgaagaggaggaagtagataaggaagatggactgcagagaaac
acacgcttttcaaggagtatccagagagcatatggggcggggcgcatctcactgctggac
actgggcagaacggggaacgcggggagggtccaggacagggggtttcatccaatcagagg
ccaggtttaggctctagttcagggtctgaggtgaacctccattcggaagagagcgtcaac
gtgctgagcagactaaccaagagcgcagacaacctacaccttaaggcccctttcagacgc
aaagccccttctccctctccaaatgactcacctggtaccagtggctctgtagtggccaat
gtgggccccagcatacagagatcagccagtgcctcgtccgtggaccttagggaccgcagc
cagagccctggtcgccttagaagtcccctaggggccaggggccacatgttgaagctagtg
ggcagcatgactgacctgactgtgagacgcaggtctaacctgtcccccgtcacttgcccg
ggctcccccgtgactcccctgtcccccctcagccgtctccacgacgactactcccgccgt
acgccctgccttcccgccggcaaccgtcaacggcggccctcgcccgccagaacgaggaac
gtcactctggtatcactggaacacacgccaaccatccacccccacctccatagaagacat
gaccatgtcttcagtttcccaaccaatagtgaacctcttgctacaacctcatctcccctg
aggagcagcctgtgtgaggggggcaggcctcaggagggtcggggagatgggtggagagct
ctatgtgactccactccactcccccagggggagccatgtgagagccacagcaaacaccag
ccagaggtcaatgcagaggtcaagacggcaccaaagcagtgcatatggaccagaccagac
caagatcaggaggagctggaggacacatcagacgaacagggcagagaggcactgttaggg
ggtgaagaggcgccctctccttcagccaccggtaccattctcaccccaacatgttcccaa
gattctcccacctcacccatggcaacaggcgcaacggaaacgtccacgtctgtcaccccc
agacggagggcggggcgatcgaggcctcggccaatctctgactacgctcagctggttgcc
aggaagtacgccatccccgaggaggaggcggagctacatcctgaggagaggattacaaat
ggaactccctgtcaggacttcaaaagtaatggaggctcgcaggacagtgacagccaagag
aactacaatatgaatggagatctccggtgccggagaagacggcctatgtctgtgattgga
ggagtggatctgtactcttcacctggcgctgaggagagagaggaccgcctgccatctccc
ctgtcacgcccccctgtcccatcccaccaagtgccctcctacagggctgtgtcggccagg
ttccgcccctccaccttctcccagagcacccccattggactggaccgccttggacaacgc
aaactacacagagtcctcagtgacggaggctcagagtgttgtgcagcggtggatggtgac
agtgtgagtgaggaggaggggagcttcgatgagctcagtgatgtcacaacgtacctgcag
cctggggtggggctgtctgctctcagccagtggatcagccagggtcaagctgtgtatgca
gaggccctgtgggaccatgtgacgatggaggagcaggagctggcgttcaaggcgggggag
gtgatccgggtgctggaggcccctcacaaggactggtggtggggcatgggggcagacaag
gaggcctggttcccctccagcttcgtcagggtgcgtgtgaaccaggaggaggattctgga
gcggagagtgtagagcgttgtgctctggaccaggagaacccacacactgccccccgggac
acacacagcgctgagcaccgccaccagatgaggaccaacgtggtcaaagagatcatgaac
acagaacgcatctacatcaaacacctccgggacatctgtgagggctatatccgtcagtgt
ggtaaaaacccaggcatgttcactgagctgcagctgaagaccatcttcagtaacatcgag
gacatctacaagttccagagacagttcctcaaagacctggagaggaagtacaacacagac
cagcctcacctcagtgagataggagcctgtttcctcttacagggtgagggtttttccatc
tactctgagtactgtaacacccaccctgcagcgtgtggggagctgcagcgcctcatgaag
ctgggcaggtacaagcacttctttgaggcctgccggctgctgcagcagatgattgacatc
tccatcgccggcttcctgctcacgcctgtccagaagatctgcaagtaccccctgcagctg
ggagagctgctcaaatacactcccaaagaccacagtgactacggtggagtgagtgatgcg
tacgaggcgatgaagaacgtggcgagcctcatcaatgaggggaagaggcgcctggaaagt
gttgacgccatcgctcactggcaagtggccatcctacgctgggagggagcagacgtgttg
gagcgcagctcggagctgatccactctggagagctgacccggatcgtgtgccagggcaac
aagacacagcagcgcagcttcttcctgttcgaccaccagctggtgttctgtaagaaggat
gtgctgcgccgcgacctgctgtactaccgcggccgcctggacatggaccacacggagctg
ctggagatgcccgatggcaaggaccctgagctgggcatctcgctgaagaatgccctgtgg
ctccggaacagctccactctggagaccctgtgttacctctgctgcagaaagccccaggac
agacagcgctggctgcaggcctttgccagggagagacggagggtacaggaggaccaagag
atgggaatgaagatcagtgaaacgcagcgaaaacaagcaatcttcaatgcgaggaaatcc
cgacaagggaaaattaagaccatgggctactctggcaatgtcccgccccaccaccagccc
ctgcatccaattcaccagcgccacgttaccgtgccaaccagcgtgcctcagcagcaggtg
ttcacattggccgagcccaagcgaaagcccgcccatctgtggtacaccttcacccgacac
accttcttcaggaagtga
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