Oncorhynchus masou masou (cherry salmon): 135517442
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Entry
135517442 CDS
T10723
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135517442
04121 Ubiquitin system [BR:
omm04121
]
135517442
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
135517442
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
135517442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
135517442
NCBI-ProteinID:
XP_064797811
LinkDB
All DBs
Position
28:complement(26804244..26837443)
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AA seq
1124 aa
AA seq
DB search
MAEGSVTDSLDLNPDETSARQKCNQQQSRRGRNREGHNRNWNGSNNYGPAPQQQQQGHFH
HGVKQSHVHDNSTVPVNFHSPPYHQEDVSRGRGRGGGRGANGGGGGGGRGSRGQPPRWNR
PGVDMGPPGLPRGHHGLGGGYRLGTPPIDGPSWRRGDPGGRSVEVGPAHEDHQDTRPEKP
RRFSKEPRREERGARSAKGPPHSLEKQENHDSHATGGGGWDPSEPREETPPSEMGARSRK
GGRAEERNPHVDAQQKFPEPKRRQGPIKEYPQEKDHQRGARDIPSGHRDKLCSGTEEEPS
WRSQGRSQARRTPLQDSGQRRTLNSDHRPGQKRWDNVPNKSKETQTGCLIEQLSEEKYEC
MVCCEVIRVMAPVWSCHSCFHVFHLNCIKKWARSPASQADETNDGWRCPACQNVVFQPPN
VYKCFCGKATNPEFQRSEIPHSCGDMCGKKRSGADCKHPCNILCHPGPCPQCPASVTKAC
TCGRTSQPMRCGQATAIHCDKQCGATLNCSEHTCTQVCHSGLCQPCPLQVKQVCYCGVVS
REVLCGTDKDRFDGSGHFCCQKACDKMLDCEAHRCEQVCHPGPCKPCPRSPRLVRSCPCG
QTALAKLLELGYPERRGCSDPIPSCGKTCSKPLPCGSSETIHICENLCHEGSCGPCSLTS
TIKCKCGSQTKDVPCAVIQNEDGLVFTCEKRCLKKRSCGRHKCGELCCVGAEHKCSLICG
YKLNCGLHRCQELCHRGNCQPCWQTSFDELACHCGVSVLFPPIACGTKPPECKNPCTRRH
ECDHPVFHNCHSEEKCPPCTYLTQKWCMGKHERRSNIPCHLQDISCGLACNKVLLCDLHR
CRRICHRAECLAEGVCRQPCLLPRPNCGHPCNAPCHKGTSCPGSTCTAKVALQCDCGRRK
ETVVCTEAASAHQRYAAIAMASKLSDMQLGDSVDMGLITKKEMKHTKLECDEGCAALERN
RRLAEALQIDPSVDPFNMRSSSSTYSDSLRVDARKDFKFVSEIEEEIKNLVELTSKGKQS
KRSHCFPPMNREHRKLVHELAEAYNVESVSYDSEPKRNVVITAIRGKSACPNSTLTSLME
RDTGIPRAPPPIAHIKHSSKADSVSSWSKAVKEEPVIDYFDVQD
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggctcagtcacagactctctggatttgaatccagatgagacttcagcacga
cagaaatgtaaccagcagcaatccaggaggggtcggaacagagagggccacaaccgtaac
tggaatggttctaataattacggcccagcaccgcagcaacagcagcaaggtcattttcac
catggggtcaaacaatctcatgtccatgacaattcaacggtccctgtaaatttccattct
cctccctaccaccaagaggatgtatcaaggggtcgaggaagaggaggaggaagaggggct
aacggaggtggtgggggagggggccggggctcaaggggccagcctccaaggtggaacagg
cctggggttgacatgggcccccctggattacctaggggtcaccatggactgggtggtggt
tacaggcttggaacaccccccatagacgggcctagctggcgtcgaggagaccctggcggc
cggagtgtagaggtggggcctgcccacgaagaccaccaggacacccgccctgaaaaaccc
cgacggttcagcaaggagccgcgaagagaagagagaggtgcgaggagtgcgaaaggacct
cctcactctctggaaaagcaggagaaccacgacagccacgctacaggaggaggaggctgg
gacccttctgagcccagagaagaaaccccaccatcagaaatgggggccagaagtcggaaa
ggagggagagccgaagaaaggaacccccacgtcgacgctcaacagaaattccctgagccc
aagcgacgccaggggcctatcaaagaatatccccaggagaaggaccatcagaggggagcc
agagacatcccctctggccatcgtgataaactgtgctctggcactgaagaggagcccagc
tggaggagtcaggggagaagccaggcgagacgcacccccctacaggacagtggccagagg
agaacactcaactcagaccacaggcctggacagaagaggtgggacaacgtgcccaacaag
agcaaggagactcagacaggttgcctgatcgagcagctgtctgaggagaagtatgagtgc
atggtgtgctgtgaggtgatcagagtcatggctccagtctggagctgccacagctgcttc
cacgtcttccatctcaactgcatcaagaagtgggcccgctccccagcctcccaggcagac
gaaacaaatgatgggtggcggtgtccggcctgtcagaatgttgtcttccaacccccgaat
gtctacaagtgcttctgtggtaaagcgaccaacccagagttccagcgtagtgagatccca
cacagctgtggggacatgtgtgggaagaagaggagcggagcagactgcaagcacccctgt
aacattttgtgtcacccaggaccttgtccccagtgtcctgcttctgtcaccaaagcatgt
acctgcggaagaaccagtcagccaatgcggtgtggccaggccactgccatccactgtgac
aagcagtgtggcgccaccctcaactgttccgaacacacctgtacccaggtgtgccacagc
ggactgtgccagccttgcccgctacaggtcaagcaggtgtgctactgcggtgttgtgtct
cgggaggtactctgtgggacggataaagaccgctttgatggctcaggtcacttctgctgt
cagaaagcatgtgacaagatgttggactgtgaggcccaccgctgtgagcaggtgtgccac
cctgggccgtgcaagccgtgcccacgctcccccaggcttgtaaggagctgcccctgtggg
cagacggctctggccaagctcctggagctgggctaccccgaacgccgcggctgctccgac
cccatcccctcctgtggcaagacctgcagcaagcctctgccctgcggctccagcgagacc
atccacatctgtgagaatctgtgccatgagggaagctgtggtccctgctcgctcacctcc
accatcaaatgcaaatgcggctctcaaaccaaggatgttccctgtgcagtcatccagaat
gaagatggactggtttttacttgtgagaagcgctgcctcaaaaaacgctcctgtggccga
cacaaatgtggcgagctgtgctgtgtgggtgcggaacacaagtgctctctgatctgtggc
tacaagctcaactgtggcctccaccgctgccaagagctctgtcaccgtgggaactgccaa
ccatgctggcaaaccagttttgatgagctggcgtgccactgtggggtgagtgtcctgttc
ccccccatcgcctgtggcaccaagcccccagagtgtaagaacccgtgtaccaggaggcac
gagtgtgaccacccagtgttccacaactgccacagtgaggagaagtgcccaccctgtacc
tacctcactcagaagtggtgcatgggaaagcatgagcgaaggagcaacatcccgtgccac
cttcaggacatctcctgtggcctggcctgcaacaaggttctgctgtgtgacctccaccgc
tgccgccgcatctgtcaccgggccgagtgtttggccgagggcgtctgccgccagccctgc
ctgctgccccggcccaactgtggccacccctgcaacgccccttgccacaagggcaccagc
tgcccgggcagcacctgcactgccaaggtggcgctacagtgcgactgcggtcggagaaag
gaaacagtggtgtgcacggaagcagccagtgcccatcagaggtatgcagccattgccatg
gccagtaagctgtctgacatgcagctgggtgactctgtagacatgggtcttatcactaag
aaggagatgaaacacaccaagttggagtgtgacgaggggtgtgctgcactggaaaggaac
aggcgattggctgaggccctgcagattgacccgtcagtggaccccttcaatatgcgctcc
tcatcctcaacgtacagtgacagcctcagagttgatgccagaaaagattttaagtttgtc
agcgagatagaagaggagatcaagaatctggttgagctgaccagcaagggtaaacagtcc
aaaaggagccactgcttcccccctatgaaccgggagcacaggaagctagtccacgagctg
gctgaggcctacaacgtggagagtgtgagctacgacagcgagcccaaacgcaacgtagtc
atcaccgccatcagggggaagtctgcctgtcctaactcaaccctgacctccctgatggag
agagacactgggatcccgagggctcctccacccattgcccatatcaaacatagcagcaag
gctgacagtgtgagcagctggtccaaggcagtcaaagaagagccggtgattgactacttc
gatgtccaggattaa
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