Oncorhynchus masou masou (cherry salmon): 135517449
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Entry
135517449 CDS
T10723
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04140
Autophagy - animal
omm04148
Efferocytosis
omm05132
Salmonella infection
Brite
Membrane trafficking [BR:
omm04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
135517449 (vps41)
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NCBI-GeneID:
135517449
NCBI-ProteinID:
XP_064797832
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Position
28:27334852..27350648
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AA seq
854 aa
AA seq
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MAEVEEKGRKPSEESTDESEEEDSVEEPKLKYERLANGVTGILQKDAASCMTVHDKFLAL
GTHFGKVFLLDIQGNVTQKFEISPVRINQISLDESGEHVGICSEDGKVQVFGLYTREGFH
ENFDCPVKVVALHPRFSSSNYKQFVTGGNKLLLYERNWLKRWKTSTLHEGEGTITNVQWR
ANLIAWANNVGVKIYDISTKQRITNVSRDNVSLRPDMYPCSLCWKDNSTLIIGWGSSVKI
CAVKERDHAEMRDLPSRYVEIVSAFETEFFISGLAPLADQLVNLYFVKENSDHVEEEFRA
RPRLDIIQPLPEGFEEISSDALTVRNFQENECRDYRLEHSEGESLFYIISPKDIVVAKER
DQDDHIDWLLDNKKYEEALMAAEISFKNVKRHEVQKIGMAYINHLVEKGDYDTAARKCQK
VLGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILNEFLKTDYEGFATLI
REWPGELYNNMTIVQAVADHLKKDPTNSTLLTTLAELYTYDQRYDRALEIYLRLRHKDVY
QLIHKHNLFSSIEDKIVLLMDFDKEKAVDMLLDNEDKISTDRVVEELRDRPELLHIYLHK
LFKRDHHKGQRYHERQIGLYAEYDRPNLLPFLRDSIHCPLEKALEICQERNFVEETVFLL
SRMGNCRRALQMIMEELEDVDKAIEFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILHDYNLQILLREGCKKILVADSLSLLQKMHRTQM
RGVRVDEESICESCHASILPSDMAQNFSVAVFHCRHMFHKECLPSPGTIPGVQFCNICSA
KRRGPGSGILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtagaggagaagggcaggaaaccaagtgaagaatccacagatgagtctgag
gaggaggacagtgtggaggagcctaagctgaagtatgaacgattggccaatggggtgact
ggaattctccaaaaggatgctgccagctgtatgactgtccatgataagttccttgcgctg
ggcactcactttgggaaagttttccttctggacatccaaggcaatgtgactcagaagttt
gaaattagtccagtgaggatcaaccagatcagcctagatgagagcggagagcatgttggg
atctgctctgaggacggcaaggttcaagtgtttggactctacacaagggaaggcttccat
gagaactttgactgtcctgtcaaagtggtggcgttacaccctcggttcagcagttcaaac
tacaaacaatttgtcactggaggcaacaagcttcttctgtatgagaggaactggctgaaa
cgctggaagacatccactctgcacgaaggggagggcaccataactaacgtccagtggagg
gccaatctcatcgcctgggccaacaatgtgggggtgaaaatctatgacatcagcaccaaa
caacgaatcaccaacgtctcgcgggataacgtcagcctgcggccggatatgtacccatgc
agtctgtgctggaaagacaactccaccctcatcatcggctggggctcctccgttaagatc
tgtgccgtgaaggagagggaccacgcggagatgagagaccttcctagccgttatgtggaa
attgtgtctgcgtttgaaactgagttcttcatcagtggcctggcgcctctagcagaccag
ctggtcaacctgtactttgtgaaggaaaactctgaccacgtggaggaggagttcagagcg
cggcctcgtctggacatcatccagcctctcccagagggctttgaggagatctcatcagac
gccctgaccgtccgcaacttccaggagaacgagtgtcgagactaccggctggaacattct
gaaggagaatcccttttctacatcatcagccctaaagacattgtggtggccaaagagaga
gaccaggatgaccacattgactggctgctggacaataagaagtatgaggaagctctgatg
gctgctgagatcagcttcaagaatgttaaacgccatgaagtccagaaaattgggatggcc
tacataaatcacctggtggagaagggtgactacgacaccgctgccaggaagtgtcagaag
gtgctggggaaaaacatggaactctgggagaatgaggtgtacaggtttaaaaccattggg
cagttgaaggccatcagccaatacttgcccagaggggacctgcgtctcagacctgccata
tatgagatgatcttaaatgagtttctaaagacggactatgagggctttgccacgttgatc
cgcgagtggccaggagagctctacaataacatgaccattgttcaggcagtcgccgaccac
ctcaagaaggaccccacgaacagcaccctgctcaccacactggctgaactgtatacatat
gaccagcggtatgaccgagccctggagatctacttgagactgaggcataaagatgtttac
cagctgatccacaaacacaacctcttctcctccatagaagacaagattgtgctcctcatg
gactttgataaagagaaagctgtcgacatgctcctggataatgaagacaaaatatcgacc
gacagagtagtggaggaactccgcgacagacctgagctgctacacatttacttacacaaa
ttgttcaagagggaccaccacaagggtcagcggtaccatgagagacaaattggcctgtat
gctgagtatgatcggcccaacctgctgccattcctcagggacagcatccactgcccacta
gaaaaggctctggagatttgtcaggagagaaactttgtggaggagactgtcttcctgctc
agcaggatggggaactgtagacgggcccttcagatgatcatggaggaactggaggatgtg
gacaaggccatagagtttgctaaggagcaggatgatgctgagctgtgggaggatctcatc
tcctattctattgataagccacccttcattactggtctccttaataacattgggacacat
gtggatcccatcttgctcatccaccgcataaaggagggaatggagattcctaacctccga
gattctctagtcaagatcctacatgactacaacctgcagatcttgctgagggaaggctgt
aagaaaatcttagtggctgactccctctccctgctccaaaagatgcataggactcagatg
agaggagtccgagtggatgaagagagcatctgtgaatcctgtcacgcgtcaatattacca
tcagatatggctcagaacttcagtgtggctgtcttccactgcagacacatgttccacaag
gagtgtttaccttctcctggaacaattcctggagtccagttttgcaacatctgcagtgca
aagcggagaggaccaggaagtgggatactggagatgaaaaagtga
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