Oncorhynchus masou masou (cherry salmon): 135517549
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Entry
135517549 CDS
T10723
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03271
Virion - Rotavirus
omm04145
Phagosome
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04514
Cell adhesion molecules
omm04530
Tight junction
omm04810
Regulation of actin cytoskeleton
omm04820
Cytoskeleton in muscle cells
omm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
135517549
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135517549
04514 Cell adhesion molecules
135517549
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135517549
09144 Cellular community - eukaryotes
04510 Focal adhesion
135517549
04530 Tight junction
135517549
09142 Cell motility
04820 Cytoskeleton in muscle cells
135517549
04810 Regulation of actin cytoskeleton
135517549
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
135517549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135517549
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135517549
04515 Cell adhesion molecules [BR:
omm04515
]
135517549
04090 CD molecules [BR:
omm04090
]
135517549
Membrane trafficking [BR:
omm04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
135517549
Exosome [BR:
omm04147
]
Exosomal proteins
Proteins found in most exosomes
135517549
Cell adhesion molecules [BR:
omm04515
]
Integrins
Integrin beta subunits
135517549
CD molecules [BR:
omm04090
]
Proteins
135517549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
135517549
NCBI-ProteinID:
XP_064798031
LinkDB
All DBs
Position
28:37758059..37807638
Genome browser
AA seq
798 aa
AA seq
DB search
MDLKLPLISTLLAVICYSSAQQEGNECIKANAKSCGECIQVGAKCGWCTDPEFLKQGEAT
STRCDELESLRKRGCSGAKVENPRGSQQALKNKDVTNRNKGAKKLRPEDITQIQPQKLTL
SLRSGEPQSFNLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTQLMLEMSKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGQEFNTLVGRQQI
SGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAITEEFQPVYKELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLAEGVTIAYQSRCKNGVTGEGEMGRKCSNISIG
DEVSFTISITAKQCPKMGKPETIKIKPLGFTEEVEIALNFICECDCHKNGTENSEICHKG
NGTYECGACRCNEGRIGRHCECSTNEVTSEDLDKNCRKDNGTDICSNNGDCVCGTCECKK
RENPEERYSGKFCDCDNFNCDRSNNKLCGGHGRCECRVCICDANWTGSACDCSLDTTTCL
ASNKQICNGRGTCECGTCKCTDPKFQGPTCEICPTCPGVCAEHKECVQCRAFGTGEKKET
CERDCSYFNLIKVKDRDKLPQPGQAFPLMHCKERDANDCWFYYTYAVNNNTEKEVHVVET
LDCPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGEN
PIYKSAVTTVVNPKYEGK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaaactacctctgatatcaacattgttagcagtcatttgttacagcagtgct
cagcaagaagggaacgagtgcatcaaggccaatgccaagtcctgtggggagtgtattcaa
gtgggagcgaaatgtggatggtgcacagacccagagtttcttaagcagggtgaggccacg
tcgacccgctgtgacgagctagagtccctgcggaagagaggttgcagtggcgccaaggta
gagaacccccgaggcagccagcaggccctgaagaacaaggatgtgaccaaccgcaacaag
ggagcaaagaaactcagaccagaggatatcacacagatccagccccagaaactcaccctt
agcctcagatctggtgaaccccagtcttttaatctgaagttcaaacgagctgaggattac
cccatcgacctctactacctgatggacctctcctactcaatgaaggatgatctggaaaat
gtaaagaacctgggaacacagctgatgctggagatgtcaaagatcacatctgatttcaga
atcggttttggttccttcgttgagaagactgttatgccttacataagcaccaccccagcc
aagctgctgaacccctgtactggggaccagaactgcaccagtccattcagctataagaat
gtcctgaagctgaccagcaatggacaggagttcaacaccctggtgggacgacagcagatc
tccggaaacctggactcaccagagggaggctttgatgccatcatgcaagtggctgtctgc
ggtgagcacattggctggaggaacgtcacacgtctgctggtgttttccactgatgctggc
ttccactttgctggagatgggaaactgggagggattgttctgcccaacgatgggaaatgc
cacctggagaacaatatgtacaccatgagccactactatgactacccctccatcgcccat
ctggttcagaaactaagtgacaacaacatccagacaatctttgccatcacagaggagttc
cagcctgtttacaaggagttgaagaatctcattcctaagtctgcagtcgggacactctct
gcaaactccagcaacgttatcaaccttattattgatgcctacaattctctttcctcagag
gtgattctggagaacagtaagctagcagagggagtgaccatcgcgtaccagtcacgctgc
aagaacggagtgactggtgagggagagatgggaagaaaatgctccaacatctccatcgga
gacgaggtgtctttcaccataagcatcacagctaagcagtgtcctaagatgggcaaacca
gagaccatcaagatcaaacccctagggttcacagaggaggtggagatcgctctgaacttc
atctgtgaatgtgactgtcacaaaaacggcactgagaacagtgaaatctgccacaaaggc
aacgggacatatgaatgtggagcctgcaggtgcaacgagggccgtataggtagacattgt
gagtgcagcaccaacgaagtgaccagcgaagacctggataagaactgtcgtaaagacaat
ggtacagacatctgcagcaacaatggagactgtgtgtgtggaacctgcgagtgtaagaag
agggagaacccagaggaacgctacagtggaaagttctgcgattgtgacaactttaactgt
gaccgctccaacaacaaactctgtggaggacatggtcgttgtgagtgcagggtgtgtatc
tgtgatgccaactggacaggcagtgcctgtgactgttctctggacaccacaacctgcctg
gcctctaacaagcagatctgtaatggccggggcacctgtgagtgtggcacctgtaagtgc
actgaccccaagttccaggggcctacctgtgagatctgccccacctgtccaggagtctgc
gcagaacacaaggagtgtgttcagtgcagagcctttgggacgggggagaagaaggagacg
tgtgagagggactgtagctacttcaacctgatcaaggtgaaggaccgagacaagctgccc
cagccaggacaggctttccccctgatgcactgtaaggagagggatgccaacgactgctgg
ttctactacacctacgctgtcaacaacaacacagagaaggaggtccatgtggtggaaaca
ctagactgccctgcgggcccggacatcatccccatcgtggctggcgttgtggcgggcatt
gtgctgatcggcctggctttgctgctcatttggaagctgctcatgatcatccacgacagg
agggagttcgccaagtttgaaaaggagaagatgaatgctaaatgggacacgggagaaaat
cccatctacaagagtgctgttacgacggtggtcaaccccaaatatgaaggcaaatga
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integrated database retrieval system
