Oncorhynchus masou masou (cherry salmon): 135517601
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Entry
135517601 CDS
T10723
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135517601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135517601
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
135517601
Prokaryotic type
Archaeal type
TFB
135517601
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
135517601
NCBI-ProteinID:
XP_064798131
LinkDB
All DBs
Position
3:complement(43633545..43645739)
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AA seq
318 aa
AA seq
DB search
MASTSRGEGLALPKVQCPNHPDTMLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNE
KATKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMGATYIARK
AVEQDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAD
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacaagccgtggagaaggcctggcccttcctaaggtgcagtgccccaaccac
ccagacaccatgctggtggaagactacagagcaggggatatgatctgccccgagtgtggc
cttgtagtgggtgacagggtgattgacgtcggctcagagtggaggaccttcaccaatgag
aaagccaccaaagacccgtctagagtgggcgacgcccagaacccactcctcaacggggga
gacttgaccaccatgatcagcaagggaacaggcgcggctagttttgacgagttcggcaac
tccaagtaccagaaccggcggaccatgagcagttcagaccgtgccatgcttaacgccttc
aaagagattaccaccatggccgaccggatcaacctaccaaggaatatcatagaccgaaca
aataacttatttaagcaagtgtacgaacagaagagcctgaaggggcgggccaacgacgcc
atcgcatcagcctgcctttacatcgcctgcagacaagagggcgtgcctcggacgtttaaa
gagatctgcgccgtgtcccgcatctccaagaaggagatcggccgctgcttcaagctgatc
ctcaaggccctggagaccagcgtggacctcatcaccaccggagacttcatgtcccgtttc
tgctccaacctgggcctgccgaagcaggtgcagatgggggccacctacatcgcccggaag
gccgtggagcaggacctggtgcccggcaggagccccatctctgtggccgccgccgccatc
tacatggcctcccaggcctccgctgagaagaagacccagaaagagattggagacatcgcc
ggtgtggcagacgtcacaatcagacagtcgtaccgactcatctacccccgtgcagctgac
ctcttccccccggacttcaaattcgacacccctgtggacaaactgccccagctgtga
DBGET
integrated database retrieval system
