Oncorhynchus masou masou (cherry salmon): 135517611
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Entry
135517611 CDS
T10723
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135517611
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
135517611
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Meiosis-specific proteins
Others
135517611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
135517611
NCBI-ProteinID:
XP_064798153
LinkDB
All DBs
Position
3:43691960..43722743
Genome browser
AA seq
1585 aa
AA seq
DB search
MLDSEDCTLSLDNLFFERPVVHKVKPLCHEQSSWQLKPPLSLSQIPATQDIQKEAEGLSS
FSFSQKSNKFLPPLKRAADGDAFTPKNNKLNQNTSDGRKEPEAQSGCALWAREDFMNKSQ
DTQKVRGQTKTPHESGHALEQKHFSLEFSQSPPLRRSLFKPPCGQVLNSSANSNRGLNQA
RPGVQQTFDQVSMATEPRLAKQSAAGSGPLTDLGPPTARGQPQKTQDKGTKRAHVLPMTP
QPLHIQNTSGPGILRPISEIPAKFRSVFKEFPYFNYVQSKALDDVLYTGKNFVACAPTGS
GKTVLFELAIIRLLMETTEPWRNVKAVYMAPIKALCSQRFEDWKNKFGPLGLSCKELTGD
TEIDDFFEIQDANIIMTTPEKWDSMTRKWRDNCLLQLVRLFLIDEVHVVKDPMRGATLEV
VVSRMKAVHAYRAAENPQEDVSMRFVAVSATIPNTKDIADWLCDDRDPATCLEMDESHRP
VKLRKVVLGFPCNSNQTEFKFDLSLNYKMANIIQTYSDQKPTLVVFFKYIFKQFCSTRKG
VQQSATVLAKDARFIMSIEHKQRLVNYANSLLDSKLRDLVSFGVGFHHAGVDVSDRKRIE
EAFNMGDLPVLFTTSTLAMGVNLPAHLVVIKSTTHYIGGACEEYSEADMLQMIGRAGRPQ
FDTSATAVIMTKTQTKDKYMQFMNGAEIIESSLHTHLVEHLNAEIVLHTISDVNMALDWI
RSSFLYIRALKNPKHYGFSTDLDRCGIEDKLQELCLKNLNSLASIGLISMDEDVNIKATE
AGRLMARYCVAFDTMKQFSKVTGTETLPELIELVVKGREFTDVQLRVNEKRTLNMLNKDK
NRITIRYPMEGKIKNKEMKVNCLIQAQFGSIPIQEFGLAQDTGRIFRNGVRISRCLAEFL
NQRSKTDFSALLNSLILAKCFTAKLWEDSPYVSKQLEKIGLSLSTAMVNAGLTTFNKIEQ
TNARELELIVNRHPPFGNQIRDAVMNLPKYEVSLEQLPRYNIATAEIVVTVNVKNHEQLL
SKRTTHDHHYVTMIIGDCDNNVVFLQKLTDLMLLKSGNWSKKIEVAKAFKGEEISVNLIS
SEYVGLDIQQKFSVFYSGPKRYGGESFTPEQHDTMHIAQANAQRSQGATQRTQPTGQQTQ
ATAQKRTSTSTEKVPGKRQCNHFCKNKDQCGHDCCQNGVPVVLKRPMNQHSSFSSYLQDL
KTRSDTLTETPVKRLKMRMSGRTGATNIQHFSYTPAACRFVGNHYGASTIQQSVESAEDF
ATPQEMAYLENFDHEYTDYLEDIYQTMGEEEPPHIQTPAESQSTSMWRKPSAYNGGSLSH
STPQSQGMGYSQSHSTTQSQSTGYPQSHSTHQTHSMGYPQSHFHLQNQSREETQSHNTPQ
SQTSGYSTPQSQSRSFSPSPIVDLTDDSGFLSSSHTPSVTFDLGDEWDDFDDDNLVHASE
TSCTTVANTQGIDRDKLKGHSTPLPSTYVQPKPRFTVSSAPLRSTSPVIPQKAVTSLSVR
PYNLQASAPWSHSDNKATRTFSEPSVKAPSFPKQTDTSMAPLGGQFDFFSKTTTPNNDNA
TGKRLQGEDNSKEVDAFMGIFDGLF
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgttggactcagaagactgcactttgtccctggataacctcttctttgagaggccagtt
gtccacaaagtaaagccactttgtcacgagcagagttcttggcagttgaaaccccctctg
tccctctcccagatcccagccactcaggacatccagaaagaggcagagggtctttcatca
ttcagtttctctcagaagtccaacaaattccttccccctttgaaaagagcagctgacggt
gatgctttcactcccaagaataacaaattaaatcagaataccagtgatggaagaaaagaa
cctgaggcacagagcgggtgtgccctttgggctcgggaagacttcatgaataaatcccag
gatacccaaaaggttagaggtcaaactaaaaccccacatgagtctggtcatgcactggag
cagaaacatttctctctggagttcagccaaagcccacctctacggagaagtttgttcaaa
cctccctgtggccaggtgttgaacagcagcgcaaactcaaacagaggcctcaaccaggca
cgacccggagtgcagcaaaccttcgaccaggtttctatggcgacagagcctcggctggca
aagcagtcagcagcaggctccggccccctcaccgatctgggcccgcctacagcccgggga
caaccacagaagacacaggacaagggcaccaagagggctcatgttctccccatgacaccc
caaccccttcacatacaaaatacttctgggcctgggatactccgaccaatctctgaaatc
cctgctaaatttagatcggtcttcaaagagttcccttacttcaactatgttcaatcaaaa
gccctagatgacgttctatacacgggtaagaactttgtggcttgtgctcctacgggctct
ggtaagactgtgctttttgagttggccatcatccgcctactgatggagaccacagagccc
tggagaaacgtcaaagctgtgtacatggcccccatcaaagctctatgcagccagcgcttt
gaggactggaagaacaaatttgggcctctgggcctgagctgcaaggagctgactggagac
acagagatcgacgacttctttgagattcaagacgccaatatcatcatgaccacacctgaa
aaatgggacagcatgacgaggaagtggagggataactgcctgctgcagttggtccggctt
ttccttattgatgaggtgcacgtggtgaaggaccctatgcgtggagccacactagaggtg
gtggtgagcaggatgaaggcggtccatgcctaccgtgcagcagagaaccctcaggaggat
gtctccatgagatttgtggccgtctccgccaccatccccaataccaaggatatagcagac
tggctgtgtgacgacagagaccctgctacttgtctggagatggatgagagtcacagaccg
gtaaaactgaggaaagtagtgctgggtttcccctgcaacagcaaccagactgagttcaag
ttcgacctgtcactcaactacaagatggccaacatcatccagacctactcggaccagaaa
ccaacacttgttgttttttttaaatatatttttaaacagttttgttcaacaaggaaagga
gtccagcagtcggccactgttctggccaaggatgccaggttcatcatgagtattgaacac
aaacaaaggttggtgaattatgcgaactctctcctggactcaaaactcagagacttggtg
tcgtttggagttggtttccaccacgccggagttgacgtgtcagacaggaagcgaatcgag
gaggccttcaacatgggagacctgcctgtgctgtttacaactagtactctggcgatgggg
gtgaacctgccagcccacctggtggtaatcaagtccaccacgcactacatcgggggcgcc
tgtgaggagtacagcgaggccgacatgctgcagatgattggccgagcaggccggccacag
tttgatacatcagcgaccgcagtgatcatgaccaagactcaaaccaaagacaagtacatg
cagttcatgaatggagcggaaatcatcgaaagcagcctgcatacccacctggtggagcac
ctgaacgctgagattgtcctccacaccatttcagacgtcaacatggccctggactggatc
cgctccagcttcctctacatccgagctctgaagaaccccaaacactatggcttttccact
gacttggaccgatgtggaatcgaagacaaattgcaagagctctgtctgaagaacttgaat
tccctggcctccattggtctgatctccatggatgaggatgttaacatcaaagctacagag
gcaggcaggctgatggcaaggtactgtgttgcgtttgacaccatgaagcagttcagcaag
gtgacaggcactgagaccttacctgagctgatagaattggtggtgaagggcagagagttc
actgacgtgcagctgagagtgaacgagaagagaaccctgaacatgttgaacaaggacaag
aacaggatcactatcaggtatcccatggagggaaagatcaaaaacaaagagatgaaggtg
aactgtttgattcaagcccagtttggctccattccaatccaagagtttggacttgcacag
gacacagggagaatcttcagaaatggagtccgaatcagcagatgcttggcagagtttctg
aaccagcgctccaagacagacttctctgctctactcaactccctgatactggccaagtgc
ttcacggccaagctgtgggaggactctccttatgtctcaaagcagctggagaaaataggg
ttgtctctgtcgacggccatggtgaacgctgggctcaccactttcaacaagatagagcag
accaacgccagggaactggagctgattgtcaacagacatcctccgtttggaaaccaaatc
agagacgctgtcatgaatctacccaagtatgaagttagtttggagcagcttccaagatac
aacatcgccaccgcagagattgtcgtgaccgtgaatgtgaaaaaccacgaacagctactg
tcaaagagaaccactcatgaccaccactatgtcacaatgatcatcggggactgtgacaac
aacgtggtcttcctgcaaaaactcacagacttgatgctgttgaagtcgggaaactggtca
aagaagatcgaagtggcgaaagccttcaaaggagaggagatcagcgtgaatctaatcagc
tcagaatacgtggggttggacattcagcagaagtttagtgtcttctactctggaccaaag
aggtacggaggtgaatcattcacacctgagcaacatgacacgatgcacatagcacaggct
aacgctcagagatcacagggtgcaacacagagaacacagccaacaggtcagcaaacacag
gctacggcacagaagagaacctccacatccacagaaaaggttccaggcaaaagacaatgt
aaccacttctgcaaaaacaaggatcagtgtggccacgactgctgtcaaaatggagtgccg
gtggttctgaagaggcctatgaatcagcattcgagtttctcctcctacctccaagacctg
aagaccaggagtgacacactgacagagactccagtcaaacgcctcaaaatgagaatgagt
ggtaggactggggctacgaacattcagcacttttcttatacgcctgctgcttgcaggttt
gtaggtaatcattatggcgcttcaacaatacaacagagtgtggaatcagctgaggacttt
gcaacaccccaagagatggcatatcttgagaactttgaccatgagtatactgactacctg
gaagacatatatcagacaatgggagaagaggaaccaccacatattcaaacccctgcagag
tcacaaagcacttcaatgtggaggaaacccagtgcatacaacggagggtcactcagccac
agcaccccccaaagccagggcatgggttactcccaaagccacagcactactcaaagccag
agcacgggttacccacagagccacagcacccaccaaacccatagcatgggttacccccaa
agtcattttcaccttcaaaaccagagtagggaggaaacccagagtcacaataccccccaa
agccagactagcggttacagcactccccaaagccagagcaggagtttctctccgagtccc
atcgtagacttgaccgatgacagtggcttcctctcgtcgtcacacacccccagcgtgacc
tttgacctgggagacgaatgggatgattttgacgacgacaacttagttcatgccagtgag
acatcatgcaccactgtagctaacactcaggggattgaccgtgacaagctgaaaggtcac
tcaacaccactaccatccacttatgtacaacccaaaccccgcttcactgtgtccagtgcc
ccactcaggtcaacctccccagttattcctcagaaagcagttactagtctctcagtcaga
ccatataacctccaggcttctgctccctggagccactctgacaacaaggccacaaggaca
ttcagtgaaccctctgtgaaagcaccctccttcccgaaacagactgatacaagcatggct
ccactgggaggacagtttgatttcttctcaaagaccactaccccaaacaatgacaatgcg
actggaaaaaggctccagggagaggacaacagcaaggaagtggatgcattcatgggtata
tttgatggactattttag
DBGET
integrated database retrieval system
