Oncorhynchus masou masou (cherry salmon): 135517629
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Entry
135517629 CDS
T10723
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135517629 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135517629 (rpap2)
Enzymes [BR:
omm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
135517629 (rpap2)
Protein phosphatases and associated proteins [BR:
omm01009
]
HAD phosphatases
Fcp/Scp phosphatases
135517629 (rpap2)
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
135517629 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
135517629
NCBI-ProteinID:
XP_064798192
LinkDB
All DBs
Position
3:43739007..43749042
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AA seq
670 aa
AA seq
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MENEPRKRVARSSKPGKRDGSSVKEAQAAAEEARRREAVRETLREKLDLEKRALQVVERL
LEDSVADDFLVDCARLITAANYKDTVEERSIVKLCGYPVCSNKLGKVSTQQFKISTKTNK
VYDITERKSFCSNFCYKASKSFELQISKSPLWLRQHESPPDVKLMKTGDGGSTGEEVRLA
ERRLREDDVENPLPLDSVSPEAPEDPRRSPTAGHSDDSDAEHDFVSSVVSQRRGPRVHWG
DLPKRTAEGEGREPGEGEDRERRSGRKDTTVPKQIQTNEAEDKEEHTEESQKAQRKPSNG
TDGRQQHTTDTNHQSEQQSFLGERGSPEGQSMEEAAELLSQVTIQDRDPATATSSALTAY
SVQNQEPAPNPSPQGDPAQPTQPGINITQVGMSRRGAQGLLKGHEAGTKPVSVRLNLLEG
LRRTFTEWMTEETMKFLYGPDHFSKTLIETKKEEEEELDEDDLEDIVKDGGEGHETDSQG
GPGRPLAPAPDYDTLRRETEEMGLRVREFYEGTKEVQRVSGKQHARGGDSENQGGALPLV
DSHAQHLIQKRITVEKLTKGLRDIVGPLRLTMTDVSSDLNRLVRTFRFTNTNIIHKGPEW
TLIAVVLLHLLSEVSPVVREALERPASVDYLSTLMQELPLLDRDLQNLVQLLRTAELCPH
EHTEKRQTNQ
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgagccacgaaaaagagtcgctcgctcttcaaaaccaggcaaaagggatggg
agtagtgtcaaagaagcacaggccgctgcagaggaagcaagaaggagagaggcagtgagg
gagaccctgagagagaagctggatctggagaagagggctctgcaggtggtggagcgtctc
ttggaggacagcgtagcagatgacttcctggttgactgtgcaaggttgatcactgctgcc
aattacaaagacaccgttgaggagaggtccattgtgaagctgtgcggttatcctgtctgt
tcaaacaaactgggcaaggtctccactcaacagttcaaaatttccaccaaaaccaataaa
gtctatgacatcacggaacgcaagagcttctgcagtaacttctgctacaaagcctccaag
tcctttgagctgcagatatcaaagagccctctgtggctgaggcagcatgagagcccccca
gatgtgaaattaatgaagacaggagatggcggtagtaccggagaggaggtgaggctggct
gagaggcggctcagagaggacgatgtggagaacccccttcccttggactccgtgtccccc
gaggccccagaggaccccaggcgctcccctacagccggccacagcgacgacagcgacgca
gaacacgactttgtctcaagtgtggtctcccagcgacggggacccagggtgcactggggc
gatctgcccaagcgcaccgccgaaggggagggtagggaacctggagagggggaggacagg
gagagaaggtcgggaaggaaggacacaacggtgcccaagcaaatacaaacaaacgaggcg
gaagacaaggaggagcatacagaagaatcacagaaagcacaaaggaagccaagcaatggg
acagatggacgccaacagcacaccacagatacgaaccaccagagtgagcagcaatctttc
ctgggagagagagggtcgccagagggccagtctatggaggaagctgcagagctattgagc
caagttacaatacaggatcgagacccagccacagctacgtcttctgcactaacagcctac
agtgtacagaatcaagaaccagctccaaaccccagtccacagggggacccagcacagccc
acccagcctggcatcaacatcacccaggtgggcatgagtagaaggggagcccaggggctc
ctcaagggccacgaagccgggactaaacctgtctcggtccggctgaaccttctagaaggc
ctaaggaggaccttcactgaatggatgactgaggagactatgaagttcctatatggccca
gaccactttagtaaaacactgatagaaacaaagaaggaggaggaagaggagctagatgaa
gatgacttggaggacattgtgaaggatggtggggagggacatgagactgactcccaaggg
ggtccaggaaggcccttggccccggccccagactatgacaccctacgcagggagacagag
gagatggggctgagggtgagggagttctacgaagggacgaaggaagtccagcgggtgtca
gggaaacaacatgccagaggcggagactcagagaaccagggtggggcactcccgttggtt
gactcccatgcccagcacctcatccagaaacggattacagtggagaagctcactaaaggc
ctgagagacatcgtgggtcctctgcgtctcaccatgactgacgtctccagtgacctcaac
aggctggtcagaaccttcaggtttacaaacaccaacatcatccacaaaggcccagagtgg
accctgattgcagtggtgctcctccatttgttatcagaggtgtccccagtggtgcgggag
gccctggagaggccggcctccgtcgattacctctctactctgatgcaggagctcccactg
ctggaccgagacctgcagaacctggtccagctactcagaaccgcagagctctgtccacac
gagcacacagaaaaacggcagacaaatcaatga
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