Oncorhynchus masou masou (cherry salmon): 135517708
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Entry
135517708 CDS
T10723
Name
(RefSeq) protein strawberry notch homolog 1-like isoform X1
KO
K26273
protein strawberry notch
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135517708
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135517708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
OspG_kinase
Motif
Other DBs
NCBI-GeneID:
135517708
NCBI-ProteinID:
XP_064798317
LinkDB
All DBs
Position
28:complement(47074424..47104145)
Genome browser
AA seq
1408 aa
AA seq
DB search
MMDPGQDLLLAALSESGICPNDLFDFDPQDAALPSPTPQSISISALGVGSGMEAMAPLTP
AVSIRHKPQPSTTTFVLNQLNQLPSLGTIVVTKPSTGGTARHTITVTKVVHSAPSALRGS
SSTLTYSTALPSPVSTVVPSNREQIQLKDLLRTGSTMKSSSLVELMRLKPPPDIAQPVAT
ATATGTKIILVSTKMIHKPAELNGIKKEVSSKDVARIWVNDDMKVRSFSPTLKLPGMEEE
AEEEEDEELGHAETYAEYMPMKLRIGLRHPDPVVETSSLSSVKPPNVWYRMSIPEETVDR
GWLSALQLEAITYAAQQHETFLPNGDRASYLIGDGAGVGKGRTIAGIIYENYLLGRKRSL
WFSVSNDLKYDAERDLKDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGE
SQSGGKYKTRFKQLLHWCGEDFDGVIVYDECHKAKNVCPIGSSKPTKTGLAVLELQNKLP
KARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSNFIQAVERRGVGAMEIVAMDMKL
RGMYIARQLSFTGVTFKIEEVPLTTHYIKMYNKSVRLWVAAREKFQAAANLMEAEQRMKK
SMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLEALEEGG
GELNDFVSTAKGVLQSLIEKHFPAPDRQKLFSLLGIDLSVKKTPSPSEAAAEQKGKKRKA
GAEIKKPEKRKRKSGGLSGSSSDDSESEESDKDDAESDDSFKSVSSGEDDDDFNPFKDDS
SEDEEDDPWLSGKRKEAKKGKEKMNKKKKKKKKSIDPDSIHSALLASGLGSIRPAFTTPI
VKTSSTPAIAKVEADDSCMTSQDAVEDAQQMKRDLLDQLEKLAQDLPPNTLDELIDELGG
PDNVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAAS
SGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQ
RFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPLVNP
PSDFEGDFYKEIRHGLIGVGLINVEDRSGILSLDKDYNNIGKFLNRILGMAVQEQNALFQ
YFSDTLAAVIQNAKKNGRYDMGILDLGSGDEKVKKIEAKKFLTPGYSTSGHVELYTVSVE
RGMSWEDATHAWAEQSGPDDGFYVQIRNNKKTAILVQEVNSKKRLFLVYRPNTGKQLKLE
AYADIKKKCKKVLSDDAKQHWIDQYKSSAEICAHAYWRGNCKKASVGLQCEVGLRCRTYY
VLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLTNILSSS
DQSQQLAVQQQQKWQQLHPQSLSHVHNT
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcctggacaggatttgctcttggcagccctgagcgagagcggaatctgccct
aacgacctgttcgactttgaccctcaggatgctgctcttccctctcccaccccacagtcc
atctccatcagtgccctgggtgttggctcagggatggaggcaatggctccactcacacct
gcagtctcaatcaggcacaagcctcagccctcaactaccacatttgtcttaaatcaactg
aatcagttgccatcactgggaacaattgttgtgaccaagccctcaactggaggcacggcc
agacacaccatcacagtcactaaggtggtccattcagctccctcagccctgcggggatcc
tcttccacacttacctactccactgctctcccctccccagtctccacagtggttccttcc
aacagagagcagatccagctgaaggacctgttgaggaccggcagcaccatgaagagcagt
agtctggtggaactcatgaggctcaagccaccaccagacatcgcccagccggtcgccacg
gcaacagccacaggcaccaaaattatactggtctcgacaaagatgatccataaaccagcg
gaattgaacgggataaagaaggaggtgtcaagtaaagatgtcgctcggatctgggtgaac
gacgacatgaaagtgcggagcttctcacctacactaaaactcccaggaatggaggaggag
gctgaggaagaggaggatgaagagttgggtcatgctgagacatacgctgagtacatgcct
atgaaattgaggatcgggctgcgtcacccagacccagtggtggagaccagctccctgtcc
agtgtgaagcctccaaacgtttggtacagaatgtccataccagaggagactgtcgaccgc
ggctggctgtctgctctgcagctggaggccatcacatacgctgcccagcaacatgagaca
ttcctccctaatggcgaccgagcgtcctatctgataggagacggggccggagtaggcaag
ggccggacaatcgctgggatcatctacgagaactacctcctcggtagaaagaggtcactc
tggttcagtgtttctaatgacctgaagtatgatgcggagagggatctaaaagacatagga
gccaagaacattcaggtccattcactaaacaagtttaagtatggtaagatctcgtccaaa
cacaatggcagtgtgaagaagggggtgatcttcgctacgtactcctctctgatcggagag
agccagtctggagggaagtacaagacccgcttcaaacagctgctccactggtgtggagag
gacttcgatggagtcattgtatacgacgagtgtcacaaagccaaaaatgtctgtcccatc
gggtcatccaaacccaccaagactggactggcagtcctggagctgcagaacaaactgccc
aaggcacgggtggtgtacgctagtgccactggtgcgtctgagccccgtaacatggcctac
atgaaccggctgggaatctggggagaggggacacctttcagagagttcagcaactttatc
caggctgtggagcgcagaggtgttggtgccatggagatagttgccatggatatgaagctg
agggggatgtacattgccaggcagctgagtttcacaggtgtcacgttcaagattgaggag
gttcccttgacaacccactacatcaagatgtacaacaagtctgtacgcctgtgggtggct
gcgcgggagaagttccaggcggctgctaacctgatggaggcagagcagcggatgaagaag
tccatgtggggtcagttctggtcggcccaccagaggttcttcaagtacctctgtattgcc
tccaaggtccgcagggtggtgcagcttgccagggaggaggtcaaaaacggaaagtgcgtc
gtgattggtcttcagtcgacaggagaggccagaacactggaggccctggaggaaggagga
ggagagctgaacgactttgtttccaccgcaaaaggtgttctgcagtccttgatagagaag
cacttccctgctccagacagacaaaagctgttcagtctgctgggcatcgacctgtcggtc
aagaagacgccatcgcccagcgaggccgccgcagagcaaaagggcaagaagaggaaagca
ggtgctgagataaagaaaccagagaagcggaagagaaagtctggtggtctgtcagggagc
agctctgacgacagcgaatcggaggagtctgataaggatgatgcggagagtgacgacagc
ttcaagtcggtcagctcaggagaagatgatgatgacttcaaccccttcaaggatgattcc
agcgaggatgaggaggatgacccctggctgtctggaaagaggaaagaggcgaagaaaggc
aaggagaagatgaataaaaagaagaaaaagaagaagaagagcattgacccagactctatc
cacagtgccttgttagcctctggtctgggctccatcaggcctgcttttaccacccccata
gtcaagacctccagcacacctgccatagccaaggtagaggcagatgacagctgtatgacc
agtcaggatgctgtggaagatgctcagcagatgaagagagatctgttggaccagctggag
aagctggctcaggatctaccccccaacactctggatgaactcatagatgagctgggagga
ccggacaatgtggctgagatgacgggccgtaaaggtcgggtggtcagtaacgacgacggc
agcatctcttacgagtcccgctctgaattggatgttcctgtggagatcctcaacctcaca
gaaaaacagaggttcatggacggagagaaaaacatagccatcatctcggaggcggctagc
tccggtatctccctgcaggctgaccggcgggtgaagaaccagaggaggagggtccacatg
acgctggagctgccctggagtgcagacagagccatacagcagtttgggaggacccacagg
tctaaccaggtgacagccccagagtacgtgttcctcatctctgagctggctggggaacag
aggtttgcctccattgtggccaagagactggagagcctgggtgccctcacgcatggagac
agaagagcaacagagacaagagatctcagcaggttcaactttgacaacaaatatggcaga
aatgcactggagatcgtgatgaagtcgattgtcaacctggactctccgttagtgaatcct
ccttcggacttcgaaggggatttctacaaagagatccgtcatgggttgatcggagtgggt
ctgatcaatgtggaggaccgatcagggattctgtctctggacaaagactacaacaacata
gggaagttcctgaaccgtatcctagggatggcagtgcaggagcagaacgccctattccag
tacttctctgacactctggcagctgtcatacagaacgccaagaagaacggacgctacgac
atgggcatcctggacctgggttctggggatgagaaggtgaagaagattgaagccaagaag
ttcctgaccccaggctactccacctcaggacatgtggagctctacacggtgagtgtggag
agaggcatgtcctgggaggatgccacccatgcctgggctgagcagagtggaccagatgat
ggcttctatgtacagattaggaacaacaagaagacggccatcttggtgcaggaggtgaac
agtaagaagaggctgttcctggtctacagacctaatacgggaaaacagcttaaactggaa
gcctacgctgacatcaagaagaagtgtaaaaaggtgctctcagatgatgccaaacagcac
tggattgaccagtacaagtcttcagctgagatctgcgctcatgcatactggcgtggtaac
tgtaagaaggcgtcagtgggtctgcagtgtgaggtgggtctgcgctgcaggacgtactat
gtgctgtgtggctctgtgctcagcgtgtggaccaaggtggagggggtcctggcctccgtc
agcggaacaaatgtcaagatgcaaatcgtccgcctcagaacagaggacgggcagaggatc
gtgggcctgatcattccagcgaactgcgtctctcctctgaccaacatcctgtcgtcatct
gaccagtctcagcaactggctgttcagcagcagcagaagtggcagcagctgcaccctcag
agcctcagccacgtacacaacacatag
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integrated database retrieval system
