Oncorhynchus masou masou (cherry salmon): 135517748
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Entry
135517748 CDS
T10723
Name
(RefSeq) very low-density lipoprotein receptor-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Membrane trafficking [BR:
omm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
135517748
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GFIT
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NCBI-GeneID:
135517748
NCBI-ProteinID:
XP_064798400
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Position
28:48136925..48152476
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AA seq
843 aa
AA seq
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MVTFIIGLLILPICLQQYGVVHGSKTECEPSQFQCGNGRCIPSVWQCDGDEDCSDGSDEH
TCVRKTCAAVDFVCRNGQCVPKRWHCDGEPDCEDGSDESVDVCHTRTCRVNEFSCGAGST
QCIPVFWKCDGEKDCDNGEDEINCGNITCASLEFTCASGRCISRNFVCNGEDDCGDVSDE
LECAPSSCGPSEFQCDNATCIPGSWVCDDDVDCQDQSDETPQRCGRHPTPPAKCSPSETQ
CGSGECIHRKWRCDGDSDCKDGSDEANCPVRTCRPDQFKCEDGTCIHGSRQCNSLRDCAD
GSDEVNCKNLTQCNGPDRFKCRSGECIEMSKVCNKARDCPDWSDEPIKECNLNECLLNNG
GCSHMCRDMVIGYECDCTPGLQLIDRKTCGDIDECMNPGICSQICINLKGGYKCECHNSY
QMDPTTGVCKAVGTEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTVALDADFTQQMLFW
ADLSQRVIFSTVLDKRGDVGSHVKVIDNVQTPVGIAVDWIYNNIYWSDLGTKTIAVANFN
GTKRKVLFDSGLKEPASVAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVETDIQWPN
GITLDLIKSRLYWVDSKLHMLSSVDLNGDNRRKVLQSPEYLAHPFAVTVFEDRVFWTDGE
NEAIYGANKFTGSDVITLASNLNEPQDIIVYHELIQLPGTNWCNEKAQNGGCAYMCLPAP
QINKYSPKYTCVCPKDQTLASNGLHCRPEANVSTAIREVDSTARGSAAAWVILPVLFLAM
AAAGGYLMWRNWQLKNKKSMNFDNPVYLKTTEDDLNIDISRHSSNIGHTYPAISVVNTED
DLS
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtttattattgggctccttatcctaccaatatgtcttcaacagtatggtgtt
gtacacggatcgaagacagaatgtgagcccagtcagttccagtgtgggaatggccgctgc
atcccgtctgtctggcagtgtgacggggatgaggactgctccgacggcagtgacgagcac
acctgtgttcgtaagacctgtgcggcagtggattttgtctgtcgcaatggccaatgcgtc
cccaagagatggcactgcgacggtgagccagactgcgaggatggctctgacgagagcgtg
gatgtttgccacaccaggacctgccgtgtgaatgagtttagctgtggcgccgggtccacc
caatgcatcccggtcttctggaagtgtgatggagagaaggactgcgataacggcgaggat
gaaattaactgcggtaacatcacatgcgcctcgctggagttcacctgtgcgagcggccgc
tgcatctcccgtaactttgtgtgcaacggcgaggacgactgtggcgacgtgagtgacgag
ctggagtgtgccccgtcgtcctgcggccccagcgagtttcagtgtgacaacgccacctgc
atccctggcagctgggtgtgtgacgacgacgtggattgccaggaccaatcggacgaaacc
cctcagcgctgtggtcgccaccccacgcccccggctaaatgttcacccagcgagacgcag
tgtggctctggggagtgcatccaccgcaagtggcgctgtgacggagactccgactgcaag
gatggcagtgacgaagcaaactgtcctgttcgtacctgcaggccagaccagttcaagtgc
gaggacggcacctgtatccacggcagcagacagtgcaacagcttgcgtgattgtgcagat
ggcagcgacgaagtcaactgcaagaacttgacgcagtgcaacggccctgaccggttcaag
tgtcggagtggcgagtgtatcgagatgagcaaagtgtgcaacaaggcccgggactgtcct
gactggagcgacgagcccatcaaagagtgcaacctgaacgagtgtctgctgaacaatggt
ggctgctcccacatgtgcagggacatggtgattggctacgagtgtgactgcacccctgga
ctgcagctcatagaccgtaaaacctgcggggacattgatgagtgtatgaatcctgggatc
tgtagtcagatctgtatcaacctgaagggagggtataagtgcgagtgccacaacagttac
cagatggaccccaccacgggagtgtgcaaggccgtgggcacggagccctgtctgatcttc
actaaccggagggacatccggaagttgggtctggagaggagggagtacacgcagatcgtg
gagcagctacggaacacagtggcactggatgcagacttcacccagcagatgcttttctgg
gctgacctgagccagagggtcatcttcagcacggtgttggataagcgaggagatgtagga
agtcatgtgaaggtgatagataacgtccagacaccagtggggatcgcagttgactggatc
tacaataacatctactggtcagacctcggtaccaagaccatagctgtggccaacttcaac
ggcaccaaacggaaagttctctttgacagcggtttgaaagagcctgcgtccgttgctgtt
gatccactctctggattcctgtactggtcagattggggtgaaccagctaagattgagaag
tcgggcatgaacggggttgacaggcaggtcctggtcgagactgatattcagtggcccaat
ggaatcactctggacctgatcaagagtagactgtattgggtggactcaaagttgcacatg
ctctccagtgtcgacctgaacggagacaaccggaggaaagtgctccagtccccagaatac
ctggctcaccccttcgctgtcactgtgtttgaggatcgagtgttttggacagatggggag
aacgaggcaatctacggagcaaacaagttcacaggctctgatgtgattaccctggcaagc
aatctgaatgagccacaggacatcattgtttaccacgagctaatccagctgcctgggaca
aactggtgcaatgagaaggctcagaacggtggatgtgcctacatgtgcctgccagctcca
cagatcaacaaatactcccccaaatacacgtgcgtgtgtccgaaagaccagacgctcgct
tcaaacggccttcactgtcgaccagaagccaacgtcagtacagccatccgtgaggtggac
tctacagctagaggatctgcagctgcctgggttatcctccctgtgttgttcctggccatg
gctgctgcaggaggctacttgatgtggcgtaactggcagctgaagaataaaaagagcatg
aactttgacaatccagtgtacctgaaaaccaccgaagatgacctcaacattgatatcagc
aggcactcctccaatataggccacacctacccagcaatatcagttgtgaatacagaagat
gacttgtcataa
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