Oncorhynchus masou masou (cherry salmon): 135517792
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Entry
135517792 CDS
T10723
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135517792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135517792
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
135517792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
135517792
NCBI-ProteinID:
XP_064798465
LinkDB
All DBs
Position
28:49511777..49561157
Genome browser
AA seq
2714 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVNCLLACRDEN
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDVPVLLQTVLSRNPNIFREKNIMQQPIMPQ
YKMSQNSMHGSPASTNYQQSTISHSPSSRFASPQMGSGARFTPQQNSPVSSPYAPQSPAS
YMQQYPHPPSYSQHQQIQQELHGSPVVPAAPSYSGSPKRPVQPCLEVQTQPQASPHQNPS
TPTLVASPVVPASMRNIHDNKVSGQISSNSANHNARHGSNEDYMNIVHRLGNEESDPSMR
NASFPLRSPQSISSPVGSEGTPKGSRPGLILQSPPPYAPPRDAAPDLLLDSPDHKKKQKK
LTKEEKEQLEKAAMYDIVSSPSKDSTKLTLKLSRVKSSELDQSGELLSGVEDQDTDLAYN
SLQFSRTQQDPSHRLAPGQGEQSGYQQVPVLQNTKQAIGVISGAVYDDAEMDALAEIERI
ERETLIERERCSKEVQDKDKPLKKRKQDSYPQEPGAGGTAGATQPGVGGGNVGSKLAPQE
ASAASNGASRPALMVSIDLQQAGRADGQPEVNMGTPTPAVEARRWPEERLGPEEGSDSTG
VLRLKSKTDGERLQTADGRPEVIKQRADTPKKLGPDGRPETPKHKHENRRDSSKHRHDGK
PDNGKARPDSRIPDTPRQRHEGRSDSGHREERSRDSDPSRIRRPETPSKSSRGEHDSKHG
RDRERERADKDRERKHRTEAGEPRDRRSPEQRSRPESPRVKQEGRGGVDPSGRQRTDRPC
PNLKPPNKEERRSGEEKRSGDGSRNRQDSKQQQQPVESKQEFPAYLLGGVKSGVFKNFVI
PKMKRDKDGHVLAAEMRKPGSGLGPVMEGWSEPRVKLERLGLVEEMKTGAKPVVVLQKLS
IDEVQKIIREREDRNARGSKSSKSRHSHEKSGKGGLDESVLKELPPHLIAEIESTMPLCE
RVKMNKRKRSTVNEKPKYAEVDSDDSDDDSVTESARKRHKKEREKTWMPDERERRGSGEH
RRSSWGSQERRKGSGRRYRERSPEESDEESPPPSMSDLARKMKKEKQKKRKSYEPKLTPE
ELMDSSTFKRFSASVDNILESLEDIDFNAMDDDEIPQELLLGKHQLSELGSESAKIKAMG
ITFRLPSDKLVKVLNILEKNIQDGSKLSTLMNHDADAEDEERLWRDLIMERVTKSADACL
TALNIMTSSRMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVNPHGGGYLSSRAKR
AKSSTHKQRVIIMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVESVSELQL
CAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDKDGEPMYIQMVTA
LVLQLIQCVVHLPSNRDSHDDEYNKKVDQDVLITNSYETAMRAAQNFLSVFLKKCGSKQG
EEDYRPLFENFVQDLLSTVNKPEWPASELLLSLLGRLLVHQFSNKQTEMALRVASLDYLG
TVAARLRKDAVTSQMDQRSIDRILKETQGNDETQQLQKALLAYMDENAETDPSLVFARKF
YIAQWFRDTLTETEKAMKSQNQRGDEDSSEGQHHAKDIESTGEIMQRAEARKKYLRNIIK
TAPSQFSTLRMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKA
MKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDM
LIERILDTGISVRKRVIKILRDICLEQPTFNKITEMCVKMIRRVNDEEGIKKLVNETFQK
LWFTPTPNHDKDAMTRKILNITDVVSACKDTGYDWFEQLLQNLLKTEEDASYKPARKACV
QLVDNLVEHILKYEESLADIENKGVNSNRLVSCITTLFLFSKNRAQLMVKHAMTMQPYLT
TKCNTQSDFMVICNVAKILELVIPLMEHPSETFLTTIEEDLMKLTIKYGMTVVQHCVSCL
GAVVNRVTHNYKFVWACFNRYYGALTKLKTQHSEDCNNPVLAANKPALLRSLFTVGALCR
HFDFDQEEFKGPSKVVIKDKVMELLLYFTKHEDEEVQTKAIIGLGFQFIQYPGLMFMQDV
KTLYNGILSDRKSSVNLKIQVLKNLQTYLQEEDSRMQEADQQWKKLSKQEDLKEMGDISS
GMSSSIMQLYLKQVLEAFFHTQSNVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEP
TMRNKADQQLVEIDKKYTGFIHMKAVAGMKMSYQVQQAIWSAKGTVIRGYRQDETTSALC
AHLFSMVRTNRQHRRAFLISLLNLFDDSSKMEVNMLLYIADNLACFPYQSQEEPLFIMHH
IDITLSVSGSNLLQSFKESLLKEPRRREKKQKERKYHSEEDNSEEEGRHSSRSNSSDDEV
VHRPKKPKHRAQAHVESDSDSDLEMEDLDKVMQRLPDNPVPLLDFANASQGILLLLVLKQ
HLKNLYGFSDSKIQKYSPTESAKVYEKAVNRKSHVHFSPRQTLDFLTSDLANVELTYDIK
RRIVKQYLDFKLLMEHLDPDEEDEEGEASASANARNKAITSLLGGSSHQDHKNHHQAPIE
TDDDESDGDEKTPGSSRRSRKHGDSAEASGHMNETVGSMDVIALCCPKYKDRPQIARVIQ
KTNTGYRVHWMAGSYSGVWAEAKKRDGRKTVPWVDTIKESDIIYKKIPLTSAHKLTNRVV
QTLRSLYSAKDGTS
NT seq
8145 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccattactactcttgctgggatcgctagccttaca
gacttgttaaaccagctgcccctgccatcccctctccctgccaccaccactaagagtctg
ctgtacaatgggaggatcgcggaggaggtcaactgtctgctggcctgccgggatgagaac
ctggtgtcccagctggctcacagcctcaaccaggtttccaccgagcacatagagctgaag
gacaacttgggcagtgatgacccggagggtgacgtgcctgtgctgctgcagacagtgctc
tcgaggaaccccaacatcttcagggagaaaaatataatgcagcagccaataatgccgcag
tacaagatgtcccagaattccatgcatgggagtccggcgtcgacaaactaccagcaatcc
actatctcacacagcccttctagtcgctttgcatctccacagatggggtctggcgctagg
ttcacgccccagcagaacagccctgtgtctagcccttacgccccccaaagccctgcaagt
tacatgcagcagtaccctcatccccccagctattctcagcaccaacagatccagcaagag
ctgcatggttcccctgtcgttccggctgcaccctcttattcaggaagccccaagaggcct
gtgcagccctgcctagaggtgcagacccagccccaggcctccccccaccagaacccctcc
accccaaccttagttgccagtcccgtggttcctgctagcatgcggaacatccacgacaac
aaggtctccgggcaaatttcaagcaactcagccaatcacaatgccagacatggctcgaac
gaagattacatgaacatagtccacagactagggaatgaggagagtgatccttccatgaga
aatgcctccttcccgctccgatcgccccagtctatttcttcccctgtgggcagcgaaggg
accccaaaagggtcacgacctggcctcattctgcaatcccctccaccttatgctcccccc
cgtgacgccgctcccgacctcctcctggactctcctgaccacaagaagaagcagaagaag
ctaactaaagaggagaaagagcagttggaaaaagctgccatgtacgacattgttagctct
ccctctaaagactccaccaagctgaccctcaaactgtcccgggtgaagtcctctgagttg
gaccagtccggagagctcctatccggggtagaggaccaggacactgacctggcctacaac
agcctgcagttctcccggacgcagcaggacccttcccacaggttagccccgggccagggg
gagcagtcaggctaccagcaggtccctgtgctccagaacaccaaacaggcaataggggtg
atcagcggagctgtgtacgacgatgctgagatggacgctctcgctgagatcgagaggata
gaacgagagacgctcatagaaagggagcgctgctccaaagaggttcaggataaagacaag
ccactgaagaagcggaagcaggactcgtatccccaagagcctggtgctggtgggacagcg
ggggcaactcagcctggcgtgggagggggcaatgttggcagcaagttggcaccccaggag
gctagtgcagccagtaatggtgccagccggccagctctaatggtcagcatcgacctgcag
caagcaggcagagctgacgggcagccagaggtgaacatgggcacccccaccccagccgtg
gaggcccggcgctggcccgaggaacgcctgggtccagaggaaggctccgactctaccgga
gtcctgcggctaaagtccaagacggatggagagcgactacagactgcagacggccggcca
gaagtcatcaagcagcgcgccgacacccccaagaagctgggccccgacggccgaccggag
acccctaaacacaagcacgaaaacagaagagactcgtccaaacacagacacgatggaaaa
cctgacaatggcaaggcccgacctgacagcaggattcctgacacgccacgacaacggcac
gagggccgctcagactctggtcacagggaagagaggtctcgggacagcgacccatcccgt
atccgcaggccagaaacccccagcaagtccagcaggggggaacacgactccaaacatgga
cgggacagagagagggagcgggcggataaagacagggagaggaaacacaggacagaggca
ggggaaccacgggaccgccggtctccagagcagcgctccaggccagagagcccgcgggtt
aagcaggagggccgagggggggtggaccccagtgggcgccagaggactgaccggccatgc
cccaacctcaaaccccctaataaagaggagaggaggagcggggaggagaagaggagtggg
gacggcagcaggaaccgacaggactccaagcagcaacagcaacctgttgaaagcaaacag
gagttccctgcctacctgctagggggggtaaagtctggagtctttaagaactttgtgatt
cccaagatgaagcgggataaggatgggcatgtgttggcagctgagatgaggaagcctggg
tctggtctggggcctgtaatggagggctggagcgagccccgggtcaagctggagcgactg
ggactggtagaggagatgaagacaggagccaaacctgttgtggtgctgcagaaactcagc
atcgacgaggtgcagaaaatcatcagggaaagggaggacaggaacgcacgtggctccaag
tcctccaagagcagacactcacatgagaagtctgggaaaggaggtcttgatgaatcagtg
ttgaaagaactgcctcctcatctcattgctgagatagagtccaccatgccactgtgtgag
agagtgaagatgaacaaacgcaagcgcagcaccgtcaacgagaagcccaagtacgccgaa
gtcgactccgacgactcagacgacgactctgtgacggagtctgcacggaagcgtcacaag
aaggagcgagaaaagacgtggatgcctgatgagcgggagaggagaggctcaggagagcac
cggaggagtagttggggctcccaggagcggcgcaagggatctggcaggcgctaccgagaa
cgcagcccagaggaatcggatgaggaatccccaccacccagcatgagtgaccttgccaga
aagatgaagaaggagaaacagaagaagaggaagtcatacgagcccaagctgacaccagaa
gaactgatggactcctccactttcaagaggttctcagccagtgtggacaacattctggag
agcttggaggacattgacttcaacgccatggatgatgatgagatcccacaggagcttctg
ctggggaaacaccagctgagcgagctgggcagcgaatctgctaagatcaaggccatgggc
atcaccttcaggcttccatctgataagttggtgaaggtcctgaacatcctggagaagaac
attcaggacggttccaagctctccacactgatgaaccatgacgcagacgcagaagacgag
gagcggctgtggcgtgacctcatcatggagcgcgtgaccaagtctgcagacgcctgtctg
acggccctcaacataatgacgtcgtcccgcatgcccaaggcggtgtacatcgaggacgtg
attgagagggtgctgcagtacaccaagtttcacctgcagaacaccctctaccctcagtat
gaccctgtctacagagtgaaccctcatggaggtggctatctgagctccagggctaagaga
gctaaaagctccacacacaagcagagggtgatcatcatgctctacaacaaggtgtgtgac
atcgtcagcaacatctctgagctcctggagatccagctgttgacggacaccaccatccta
caggtctcctccatgggcatcactccattctttgtggagagtgtcagtgagctccagctg
tgtgccatcaaactagtgaccgcggtgttctctcgctatgagaagcacaggcagctcatc
ctggaagagatcttcacctctctggccagattacccaccagcaaacgcagcctcaggaac
ttcaggctgaacagcagtgataaggatggggagcccatgtacatccagatggtcacagct
ctggtgcttcagctcatccagtgtgtggtgcacctccccagcaacagggacagtcacgat
gatgagtacaacaagaaggtggatcaagatgtcctgatcactaactcttatgagacggcc
atgagagcagctcagaacttcctgtccgtcttcctaaagaagtgtggcagtaagcaggga
gaggaggactaccggccgctgtttgagaactttgtccaggacctgctgtctacggtgaac
aaaccagaatggccagcttcagagcttctcctcagtctgctgggacgtctactggtgcac
cagttcagtaataagcagacggagatggctctgagggtggcatcgcttgactacctgggc
acggtcgctgcccgcctgcgcaaagacgcagtcaccagccagatggaccagcgctccatt
gaccgcatcctcaaagagacccaaggcaatgatgagacccagcagctacagaaagccctg
ctggcctacatggatgagaacgcagagacggatccatctctagtttttgccaggaagttc
tacatagctcagtggttcagggacacgttgacagagacagaaaaggccatgaagtctcag
aaccagcgaggggacgaggactcttctgaaggccagcaccacgccaaggacatcgagagc
actggcgagatcatgcagagagctgaggcccgcaagaagtacctccgcaacatcatcaag
accgcgccctcgcagttcagcacactgaggatgaactctgacactgtggactatgacgac
tcctgcctgattgtcagatatttggcctctatgaggccgtttgcgcagagcttcgatatt
tatttaacacagatcctgagagtgctgggggagagtgccatagctgtcagaactaaagcc
atgaagtgtttgtctgaggtggtggctgtagaccccagtattctagccaggttggacatg
cagcgcggggtccatggtcgtctgatggacaactccaccagtgttcgcgaggctgcagtg
gagctgctgggacgctttgtgctgagcagaccccaactcacagagcagtactacgacatg
ctgatcgagagaatactggacacgggtatcagtgtgaggaagagggtgatcaagatcttg
agagacatctgtctggagcaacccaccttcaacaagatcactgagatgtgtgtcaagatg
atccgcagggtcaacgacgaggagggcatcaagaaacttgtgaatgagaccttccagaaa
ctctggttcacccctacacccaatcacgataaagacgccatgacccgtaagatcctcaac
atcacagacgtggtgtctgcatgcaaagatacaggctatgactggtttgagcagctgctt
caaaacctgctgaagactgaggaagatgcttcctataaaccagccagaaaggcctgcgtt
cagctggtggacaatctagtggaacacatcctcaaatacgaagagtctctcgctgatatc
gagaacaagggggtgaactccaatcgtctggtgtcctgcatcaccaccctcttcctgttc
agtaagaatcgagcccagctaatggtcaaacatgccatgaccatgcagccttacctcacc
accaagtgcaacacccagagtgacttcatggtgatctgtaacgtggccaagatcctggag
ctggtaatccctctgatggagcacccctctgagaccttcctcaccaccatagaggaagac
ctgatgaagctcaccatcaaatacggcatgacggttgtgcaacactgtgtgagctgtctt
ggcgctgtcgtgaaccgggtcactcacaactacaagtttgtttgggcttgtttcaaccgt
tactatggtgccctgaccaagctgaagacccagcactcagaggattgcaacaaccctgtt
ctggctgctaacaaaccggccttgctgcgctcgctgttcactgtgggggcgctctgtcgc
cactttgactttgaccaggaggagttcaaggggcccagcaaggttgtgataaaggacaaa
gtgatggaacttctgctgtacttcaccaaacatgaagatgaggaagttcagaccaaggcc
atcattggtctaggcttccagttcatccagtacccagggctgatgttcatgcaggatgtg
aagactctgtacaacggcatcctgtcggacaggaagagctccgtcaacctgaagatccag
gtgctgaagaacctgcagacatacctgcaggaggaggattctcgcatgcaggaggccgac
caacagtggaagaagctatcgaagcaggaggacctgaaggagatgggggacatctcgtca
ggcatgagcagctccatcatgcagctgtacctgaagcaggtgctggaggccttcttccac
acacagtccaacgtacgacactttgccctcaacgtcatcgccctgacgctcaaccagggc
ctcatccatcctgtgcagtgtgtgccctacctgattgccatgggaacagacccagagccc
accatgaggaacaaggctgaccagcagctggtggagattgataagaagtacaccggcttc
atccatatgaaggccgtggcggggatgaagatgtcctaccaggtacagcaagctatctgg
tcagctaagggtacggtgatccgtggctaccggcaggacgagaccacctcggccctctgc
gcccacctcttctctatggtccgaaccaaccggcagcaccggcgagccttcctcatctca
ctgctcaacctgtttgatgacagctcgaagatggaggtaaacatgctcctgtacatagca
gacaacctggcctgtttcccctaccagagccaggaggagcccctgttcatcatgcaccac
atagacatcaccctgtctgtgtccggcagcaacctgctgcagtccttcaaggagtccctt
ctcaaagagccgaggcggcgggagaagaagcagaaagagaggaagtaccactcggaggag
gataactctgaggaagaggggcgtcacagcagccgctccaacagcagtgacgatgaggtg
gtccacaggcccaagaagcccaaacaccgggcccaggcccacgtggagtctgactctgac
tctgacctggagatggaggacttggacaaggtgatgcagcgtttgcctgacaaccccgtc
cccctgttggactttgccaacgcctcgcagggtatccttctgctgctggttctcaagcag
cacctaaagaacctctatggcttctcagacagtaaaatccagaagtactctccgacggaa
tcggctaaggtgtacgagaaggctgtgaacaggaagagtcacgtacacttcagcccacgt
cagacattggactttttaacctctgacctggccaacgttgaactgacctacgacatcaag
aggaggatcgtcaaacagtacctagatttcaagttactgatggagcacttggaccctgat
gaagaggatgaggaaggtgaggcgtcggccagcgctaacgccagaaacaaagccatcact
tcactgctgggagggtccagccaccaagaccacaagaaccaccaccaggctcctatagag
acggacgacgacgagagcgacggagacgagaaaaccccagggtcgtcacgaagatccagg
aagcacggcgactctgcggaggcatcaggtcacatgaacgagacggtaggttccatggac
gtcatcgccctctgctgccccaagtacaaggaccggccacagatcgcccgcgtcatccag
aagaccaacacgggctacagggtgcactggatggctgggtcctactctggagtctgggct
gaggctaagaaacgggatggacgcaaaactgtgccttgggtggacactatcaaggagtcg
gacataatttacaagaaaatacccttgacaagtgcacacaagctgacgaacagagtggtg
cagactttacggtcactgtactcagccaaggacggaacttcctaa
DBGET
integrated database retrieval system
