Oncorhynchus masou masou (cherry salmon): 135517850
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Entry
135517850 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34-like isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135517850
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
135517850
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
135517850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
zf-C3HC4_2
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
135517850
NCBI-ProteinID:
XP_064798577
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Position
28:complement(51770424..51797026)
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AA seq
397 aa
AA seq
DB search
MYKAGASSMWASCCGLLNEVMGTGTVRGQQPGFGAGAGPFRFAPSAGYSTYPPTSAGSVG
QLCKACGLAFSVFRRKHICLDCKKSFCALCSVLQENLRCCTTCHLLRGTAFQRPRLMALR
VKDLRQYLLLRNIPTDTCREKEDLVDLVLCHLEAGENTSTQGAVEEEEEEDTDSLHSLPH
SLHASPPSATRRSASEQSVLSASQGDAPLSRSDSSGTAQSQPHGEAPTIPLLHLEPAREP
IIEVSPVTQRRTRASLSDLDNEGDIESLSVRQLKEILARNFVNYSGCCEKWELIERVHRL
YREDEQNRKSMENVSNINSMTAVVAYPPPICNGAVGDSMKVQLASDDHLCRICMDAVIDC
VLLECGHMVTCTKCGMRMSECPICRQYVVRAVHVFKS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtataaggcaggggcatcgtccatgtgggcatcatgctgcgggctgctgaacgaggtg
atgggcacagggacggtgcgcgggcagcagccagggttcggggccggggcgggacccttc
cgctttgcccccagcgccgggtactccacctacccccccaccagcgcagggagtgtaggt
cagctctgcaaggcctgtgggctggccttctctgtctttaggcgcaagcacatttgcttg
gactgtaagaagagtttctgtgccctgtgctcggtgctgcaggagaacctccgctgctgc
accacctgtcacctcctgcgcggcacggccttccagagaccacggctcatggcgctgcgc
gttaaagacctgcgccagtacctgctgctgcgcaacatccccacagacacctgcagggag
aaggaggacctggtggacctggtgctctgccacctggaagcaggggaaaacacctccaca
caaggagctgtagaggaggaggaggaggaggacacagacagcctgcactccctcccccac
tccctccacgcctcgcccccctcagccacacgacgctccgcttcggagcagtcggtgctc
tctgcctcccagggagacgctcctctcagccggagtgacagctcagggactgctcagagc
cagccgcatggggaagctccaaccatccccctcctgcacctggagcctgccagggaacct
atcatagaggttagtccggtgacgcagaggaggacgcgggcctctttgtctgacctggat
aatgagggggacattgagagcctgtctgttcggcagctcaaagagattctggcccgtaac
tttgtcaactactctggctgctgtgagaagtgggagctgatcgagcgggtacatcggctc
taccgggaggacgagcagaacaggaagtccatggaaaatgtcagtaacatcaacagcatg
accgcagtggtggcatatcctccacctatatgcaatggtgcagtgggagatagtatgaag
gttcagctggcctctgatgatcacctgtgtcgcatctgcatggacgctgtgatcgactgt
gtgctgctagagtgcggccacatggtcacctgtaccaaatgtgggatgaggatgagcgag
tgccccatctgcaggcagtacgtggtgcgggccgtgcacgtcttcaagtcttaa
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