Oncorhynchus masou masou (cherry salmon): 135517981
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Entry
135517981 CDS
T10723
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135517981 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135517981 (exosc2)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135517981 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
135517981 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
135517981
NCBI-ProteinID:
XP_064798841
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All DBs
Position
28:59057894..59061944
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AA seq
295 aa
AA seq
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MAADMRLPTIRKQVSLSSSLSALDGKDLVVPGDVITSDTGFMRGHGTYMDEEKLTASVAG
EVERVNKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVDTNSRLDSVLLLSSVNLPGG
ELRRRSAEDELTMRDYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSL
IKRQKTHFHNLPCGASIILGNNGFVWLYPTPGHQDEEAGGYYTSLEPVSLSDREVISRLR
NCLLALGAHKVLLYDTSVLYCYESSLPHQIKDILKPEVMEEIVMMTRQKLVELEG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggatatgagattgccaacaattcggaaacaagtatcgttatcatcctctctg
tctgctttggatggaaaagatctagttgttcccggtgatgtgatcacatcagatacaggg
tttatgaggggtcatgggacttacatggacgaagaaaaactaacagcctctgtggcagga
gaggtggaaagagtgaacaagctcatctgtgtacggccgctcaagaccaggttcaacggg
gaggttggagatgtggtggttgggaggatcacagaggtgcagcagaagcgctggaaggtg
gacaccaactccagactggactctgtgttgctgctgtcctctgtcaatctgcccggagga
gagctgaggagacggtcagcagaagatgagctcaccatgagagactaccttcaggagggg
gacctcatcagtgcagaggtacagtctgttttctcagatggggcgctctctcttcacacc
cgcagtttaaagtatggaaagttggggcaaggagttcttgtgcagctatctccctctctg
atcaagagacagaaaacccacttccacaacctgccttgtggggcctccatcatcctgggc
aataatggctttgtgtggctgtaccccaccccaggacatcaggatgaggaggctggagga
tactacaccagtctggagcctgtctctctctcagatcgggaggtgatctcacggttgagg
aactgcttgctggccttgggggcacacaaggtgcttctgtacgacaccagtgtgctctac
tgttacgagtcatcactcccacaccagatcaaggatatcttaaaaccagaggtgatggag
gagattgtgatgatgacgcgtcagaaacttgtcgaactggagggttag
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integrated database retrieval system
