Oncorhynchus masou masou (cherry salmon): 135518050
Help
Entry
135518050 CDS
T10723
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135518050
04020 Calcium signaling pathway
135518050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135518050
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135518050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
135518050
NCBI-ProteinID:
XP_064798953
LinkDB
All DBs
Position
28:complement(62869633..63095528)
Genome browser
AA seq
2497 aa
AA seq
DB search
MERRAPNYSKWAERRSTVVYAMRSATFGSWRMLTLGAEYSSWAQSPESLRQRQAVISQNA
EETDSIDIDSSWQQMDVPQQYDAILHLDERAASGGSRGNHNIIRTHEALNSTPWSKSNRM
ARFAEDLPTRFGAGAGGGGRGTPGASRGGARAGGPPGGQRMYKQSMAQRARTMAIYNPNP
VKQNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYLILATIIANCIVLALEQHLPANDK
TPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVG
SDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGVE
FYMGKFHSTCFTVDTGERAAAFPCGTEAPARMCPNGTECTEYWIGPNYGITNFDNILFAV
LTVFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERE
RVEKRQDFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDENAEEKSPLDGAWYKRKHNL
PVLKRSKVKKSKNDLIGAEEGEDHFTDMSSVAPPGSPFGRASVKSSKLESSSYFRRKERR
MRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPEWLTTALYLAEFVFLGLFLSEMS
LKMYGLGARNYFHSSFNCFDFSVIIGSILEVVWSMIKPGASYGISVLRALRLLRLFKFTK
YWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDTFP
AAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIAVD
NLANAQELTKDEEKQEEEANKKLALQKAMEVKEVSPMSAANISIAAFVKQNRDALSRSSS
VSSVHSPKEQQRANKIMSVWEQRTNQLRRNNLRASSEALFNEMDPEERLRVSSALHLRSD
MKTHNDRPLVVEPGNGDNPRPPEEDRDGADPQQEGGDPHGPQPRKHYRHRERNGENGESR
HHTHHSRSRDHYHPDRPRSKEGKVERNHSREGGQDHRHHHQAESPEEGVNGGGEGREDRH
HHSDRQGNGALATRDRLESRGRGHREENGERRKHRSRRVRAQSTLDGDECRENGERNGDR
DQGHRDRQTDSQGESLATSPVQPPAGLQAGEKQEDADNQKNSHRASQAGLNSNTVHIPVT
ITAPSRETTIIPIDNIDCESLPRNEEKKDLEEELKNGPKHILPYSSMFVFGQTNPVRRLC
HYVVNLRYFEMCILSVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMI
DLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSGTKGKDINTIKSLRVLRVLRPLKTIK
RLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCR
GKFLDYDGDEVAAQDREWRKYEFHYDNVLWAFLTLFTVSTGEGWPMVLKHSVDATYEDEG
PSPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFA
INAKPLTRYMPADKQSFQYKMWQFVVSPPFEYSIMTMIALNTVVLMMKFHGAPELYEAML
KHLNIVFTALFTLECILKIIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEIKDKLINLS
FLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIE
LNEESAINHHNNFQTFFQALMLLFRSATGEAWHEIMLSCLSNRPCDKLSGSGGKECGSDF
AYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFVRVWAEYDPAACGR
MTYLDMYEMLRHMSPPLGLGKKCPPRIAYKRLVKMNMPIADDNTVHFTSTLMALIRTALE
IKLASGVLAQRLCDADLRKEISRVWPNLPPNTIDLLVTPYKNDEFNELLCPFAVVNRELT
VGKVYAALMIFDYYKQNRAKRLEQQLGLDFTGTIKNKKGPAFFCPMPMTHMQEEGTTVSR
ANPLPSSQPEPESQPEPTPSTTSLTNGEAVLSTRSPIKESGEQLSQEGQRSSSRKRILRR
GQSEDVPYSNKPQESVEMRQVENGSDIGGYSGLDGHGRAASMPRLDSQYNRNHPRHLPGT
YLAPIADISPIRRSASTLASQCHREMSLRDYTLERPSQTRAQASSAPGQAQDRPHHHHHH
RCHRRRDKDKKQKSLDRATSVQPSSTACSSVDPLVEGLTRERARERDRGRPHEKRHHSAA
GETKRYYSCERYVGREHCHTKSAGPSRSTSPGETHDLGLLKQSIRMSKGSQVVLTFGSSP
SCRGRRQLPQTPLTPRPAVAYKTGNSLPMQFGSTGHQSFLSRGLSERNALLESPPIPVTL
IGLDPNLSPCPRNAPPCRLPEEPDDFQDAVSNHGERHSPRIIASASHGATGPSSAPAPQG
RVGIPNGYHFTLGVNAVSSSSPRGTGSFREKEEDDWC
NT seq
7494 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagggccccaaactactccaaatgggcggaaaggcgatccactgtggtttat
gcaatgcgctctgccacattcggctcatggaggatgctgactttgggcgcggaatacagc
tcatgggcccagtcccctgaaagccttcgtcaacgacaggcagtgataagccagaatgct
gaagaaacggacagcatcgacattgactcgtcatggcagcagatggacgttcctcaacag
tatgatgccatcctgcaccttgacgagagagcagcttcaggagggagtcgtggtaatcat
aacatcattcgtacacacgaagccctcaatagcacgccatggtccaagtctaacagaatg
gctcgcttcgcagaagatctacccacccgctttggagctggagcaggtggaggaggcaga
ggtacgcccggcgcaagcagagggggcgcccgggctggtggtcctccaggcggccaaagg
atgtacaagcagtcgatggctcagagagccaggacaatggccatatacaaccctaaccct
gtcaaacagaactgcttcactgtcaaccgatccttgttcatctttcgagaggacaatctc
attaggaagtatgctaagcgaataaccgaatggcctccgtttgagtacttgatcctggcc
accatcatcgccaactgcatcgtactggccctggagcagcacctaccagccaatgacaag
acccccatgtcagaacgtctggatgatacagagccctactttattggaatattctgtttc
gaggctggcattaagattatcgccttgggctttgcatttcacaaaggctcgtacctccgc
aacggctggaacgtaatggactttgtggtcgtcctcactgggatcctggccacggtgggc
tcagactttgacctgaggactctgcgtgcggtgagagtactgagaccactaaaactggtg
tctggtatccccagtcttcaggtggttttgaagtctatcatgaaggccatggtgcctctg
ctccagataggcatgctgctcttcttcgccatactcatgtttgccatcatcggagtggag
ttctacatgggcaagttccactccacctgcttcactgtcgacactggtgagcgagcagca
gcgttcccctgtggtacggaggccccagccaggatgtgtcctaatggtacagagtgtaca
gagtactggatcggccccaactacggcatcaccaactttgacaacatcctgtttgccgtg
ctcaccgtcttccagtgcatcaccatggagggatgggtggacatcctctacaatgctaac
gatgcctcggggaacacttggaactggctctacttcatccccctgatcatcatcgggtcc
ttcttcatgctcaacttggtcctgggtgtcttatcaggggagtttgccaaagaaagagag
cgtgtggagaagaggcaggactttctaaagctgcgcagacagcagcagatagagagagag
ctgacaggatacctggagtggatatgcaaggcagaggaggtgctgctggaggaagaggat
gagaacgcggaggagaagtcccctctggacggtgcgtggtacaagaggaaacataacctc
ccagtgttgaaacgaagcaaggtaaagaagagtaagaatgacctgattggtgctgaggag
ggagaggatcacttcactgacatgtcctctgttgcccccccaggctctccgtttggccgg
gccagcgtgaagagcagtaagctggagagctcgtcctacttccgccgcaaggagaggaga
atgcgtttcttcatccgtcgcatggtcaaagcccagagcttctactggatagtgctatgt
ctggtgggcctcaacacactgtgtgtggccatcgtccactacgaccagcctgagtggctc
accactgccctctacctggcagagtttgtgttcctgggtctgttcctgtctgagatgagc
ctgaagatgtatggcctgggagccaggaactacttccattcctctttcaactgcttcgac
tttagtgtgataatagggagtatacttgaggtggtgtggtctatgatcaaaccaggggca
tcctatggcattagtgtgctgagggctctccgtctgctcaggttattcaaatttaccaag
tactggaactccctgaggaacctggtagtgtctcttctcaactcaatgaagtccattatc
agcttgctcttcctcctcttcctcttcatcgttgtctttgccctgctgggcatgcagctc
ttcggaggacagtttaattttgaagaggagacgccgacgaccaacttcgacactttcccc
gcggccattctcaccgtcttccagattttgactggcgaggattggaacgcagtgatgtat
catggtattgagtcccaggggggcgtacggcgggggatgttctcctcggtctacttcatc
gtcctcacactctttggaaactacacgctcctgaatgtcttcttagctatcgccgtcgac
aacctcgccaatgcacaggagctcaccaaggatgaggagaagcaggaggaagaagccaat
aagaagctggccctgcagaaggccatggaggtgaaggaggtcagccccatgtcagcagcc
aacatctctatcgctgcttttgtaaagcaaaatcgagatgcactctctcgcagctcgtcc
gtctccagcgtgcattcacctaaggagcagcagagagccaataagataatgtcagtgtgg
gagcagcgcaccaaccaactgcgtcgaaacaacctgagagccagctccgaggctctgttc
aacgagatggacccggaggagcgtctgcgggtctcctccgccctccacctgcgctccgac
atgaagacccacaacgaccgccccctagtggtggagccaggtaacggggacaatccccga
ccccccgaggaggacagagacggagcagacccccagcaagagggaggagacccccacggt
ccacagccacgcaagcactaccgtcaccgggagaggaatggggagaatggggagagcagg
catcacacccaccacagccgcagtagggaccactaccacccagacaggccccggtccaaa
gagggcaaggtggagaggaaccatagtcgagagggggggcaggaccacaggcaccatcac
caggctgaatccccagaggagggggttaacggagggggagagggaagggaagaccgccac
caccactccgacagacaggggaacggggccctggctaccagggacagactggagagcagg
ggccggggccacagggaggagaacggagaaaggaggaagcaccgctcacgcagagtcagg
gcccagtcaacgctggatggagacgagtgcagagagaacggagagagaaatggagacagg
gaccaaggacacagggacaggcagaccgactctcaaggggagagcttggccaccagtcct
gtgcagcctcctgcaggtctgcaggctggagagaagcaagaggatgctgacaaccagaag
aacagccacagagccagccaggcaggcctgaacagcaacactgtccacatccctgtcacc
atcaccgccccatccagagagactaccatcatacccatcgataacatagactgtgagagc
ctcccccggaacgaggagaagaaggacttggaggaggagctgaagaacggccccaaacac
attctcccctacagctccatgtttgtgtttggacagaccaacccggtgcgtcggctgtgc
cactacgtggtgaacctgcgttactttgagatgtgtatcctgtcggtcatcaccatgagc
agcatagccctggctgctgaagaccctgtgcaggccaatgcaccacgcaacaacgtgctc
aagtatctggactacgtcttcacaggagtgttcacatttgagatggtgattaagatgata
gacctgggactgctccttcatcctggttcttacttccgggacctgtggaacatcctggac
tttattgtggtcagtggagctctggtggcgttcgcctgctcaggaactaaaggcaaggac
atcaacaccatcaagtctctcagggtgctgcgagttctaaggcctctgaagaccatcaaa
cgactgccaaaactcaaggccgtgtttgactgtgtggtcaactctctgaagaacgtgctc
aacatcctcattgtctacatgctcttcatgttcatcttcgctgtgatcgctgtgcagctg
ttcaagggcaagttcttctactgcaccgacgagtctaaaggtctggagaaggactgcagg
ggtaagtttctggactatgacggtgatgaagtggcggcccaggatcgtgagtggaggaag
tatgagttccattatgacaatgtgctgtgggccttcctcaccctattcaccgtctccacc
ggggagggctggccaatggtcctaaagcattctgtggatgccacctatgaggatgagggt
cccagcccaggcttccgtatggagacctctatcttctatgtggtctactttgtggtcttt
cccttcttctttgtcaacatctttgtggctttgatcatcatcaccttccaggagcaggga
gacaaggccatgtcagagtgtagtctggagaagaacgagagagcttgtatcgactttgcc
atcaacgccaagcctctgacgcgctacatgccagcagacaagcagtcgttccagtataag
atgtggcagtttgtggtgtcgccaccctttgagtactccatcatgaccatgatcgcactc
aacactgtggtgctgatgatgaagtttcacggtgctccggagctgtatgaggccatgctg
aagcacctgaacattgtgttcacagctctcttcacactagagtgcatcctcaagatcatc
gctttcggaccactgaattacttgaaggcagcttggaacgtgtttgactttgtgacagta
ttggggagtatcacagacatcttggtcacggagattaaggacaagctgatcaatctgagt
ttcttgaggctgttcagggcggccaggctcatcaagctgctgaggcagggctacaccatt
cgcatcctgctatggacctttgtacagtccttcaaggccctaccttacgtctgcctcctc
atcgctatgctcttcttcatctacgccatcatcggcatgcaggtgtttggaaacattgag
ctgaatgaggaatcagccatcaatcaccacaacaacttccagaccttcttccaggctctg
atgcttctgttcaggagtgcaacaggtgaggcgtggcatgagatcatgctgtcgtgtctg
agtaaccgtccgtgtgataagctgtcagggtccggagggaaggagtgcggcagtgacttt
gcttatttctactttgtctccttcatcttcctctgctcctttctgatgctcaatctgttt
gtggcggtcatcatggacaactttgagtacctgaccagagacgcctcgatcctggggcct
caccacctggacgaattcgtccgagtttgggccgagtacgaccctgctgcctgtggccgt
atgacctacctcgatatgtacgagatgctccgtcacatgtcccctccactaggtttggga
aagaaatgcccgcccagaatcgcctacaagcgattggttaagatgaacatgcccattgcc
gatgacaacacggtgcacttcacgtccactctgatggcgctcatccgcactgctctggag
atcaaactggcgtctggagtcctggcccagcgtctgtgtgacgctgacctgaggaaagag
atctccagagtctggcccaacctgcctccgaacactatcgacctgctggtcacaccatat
aaaaatgatgagttcaatgagcttctttgcccctttgcggttgtaaaccgagagctgaca
gtggggaaggtctacgctgccctcatgatctttgactactacaagcagaaccgggccaag
agactggaacagcaactgggactggacttcacagggacaattaagaataaaaagggccca
gccttcttctgccccatgcccatgacccatatgcaggaggaggggacaacagtctccaga
gccaatcccctgccatcctcccaacctgaaccagagtctcagccagagcccacgccatcc
accacctctctaaccaatggggaagcagtactaagcactagaagtcccataaaagagtca
ggagagcaactgtctcaggagggccaacggtccagcagtagaaaaaggattctacggaga
ggccagtcagaggacgtgccctactccaacaaacctcaggaatcagtggagatgaggcag
gtggagaacggttctgatatagggggctactctggtctggatggccatggcagagcagcc
tccatgccaagactggactcccagtacaatcggaaccaccctcgtcacctacctgggacc
tacctggcacctattgctgacatcagtcctatcaggcggtcggcgtccacgttggcttcc
cagtgccaccgggagatgagtctgagagactacaccctggagaggcccagccagacccga
gcccaggcctcctcagccccaggtcaagcccaggacaggccccaccaccatcaccaccac
cgctgtcacagacgcagggacaaggacaagaagcagaagtctcttgacagggcaaccagc
gttcagccttctagtacagcatgttcgtctgttgacccccttgtggagggcttgaccagg
gagcgggcgagggagcgtgaccgcggccggcctcatgagaagaggcaccactctgcagcc
ggggagacgaagcgttactactcctgtgagcgctacgtaggcagggagcactgccacacc
aagtcagctggccccagccgctccacctcccctggagagacccacgacctaggcctcttg
aagcagagtatcaggatgagtaaaggcagccaagtggtcctaacctttggatctagccca
tcctgccgtgggcgcagacagctcccccagacacccctgaccccccgccccgccgtggcc
tacaagactggaaactccttgcccatgcagtttggttccacagggcaccagtcctttctc
agtcgtggactctcggagcgtaacgccctgctggagtcaccccccatacccgtcaccctc
attggcttagacccaaacctgagcccctgtccgcggaacgccccaccatgcagactccct
gaggagcctgacgacttccaggatgctgtgagcaaccatggagagaggcactcccctagg
atcattgcctcagcctcccatggggctactgggccctcttctgcacctgccccacagggc
agggttgggatcccaaacggctaccacttcactcttggggtcaatgccgtttcaagctcc
agccccagagggaccgggagttttcgtgagaaggaagaggatgactggtgctag
DBGET
integrated database retrieval system
