Oncorhynchus masou masou (cherry salmon): 135518192
Help
Entry
135518192 CDS
T10723
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04137
Mitophagy - animal
omm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135518192
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
135518192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135518192
03009 Ribosome biogenesis [BR:
omm03009
]
135518192
04131 Membrane trafficking [BR:
omm04131
]
135518192
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135518192
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
135518192
Ribosome biogenesis [BR:
omm03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
135518192
Membrane trafficking [BR:
omm04131
]
SNARE
SNARE associated proteins
Others
135518192
Autophagy
Aggrephagy
Other aggrephagy associated proteins
135518192
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135518192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_5
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
nSTAND3
AAA_28
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
135518192
NCBI-ProteinID:
XP_064799232
LinkDB
All DBs
Position
28:complement(71991013..72009310)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKTRPNRLVVDESLNEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLSDDVDLEQVANQTHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNISWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNAGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILGAN
LRKSPIAKDVDLDFLAKMTNGFSGADLTEICQRACKMAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTNSAPG
AGPSQGSAGGSGGTVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggaggagaatcgaaaaatgatgatctatccacagcgattttaaagcaaaag
accaggcctaaccggttggttgtggatgaatctctcaatgaggacaacagtgtggtctcg
ctgtctcaggccaagatggacgagttgcagctgttcaggggagacacagtgctgatgaaa
ggaaagaagagacgggagacggtctgcatcgtgctctctgatgacacctgctccgacgag
aaggtccgcatgaacagagtggtccgcaacaacctaagagtccgcctgggagatgttatc
agtattcagccatgcccagacgtgaagtatgggaagcggatccacgttctgcccattgat
gacactgtggaggggatcacagggaacctgtttgaggtctacctcaagccctacttcctg
gaggcctacaggcccatcaggaaaggggacatcttcctggtgaggggaggcatgcgagct
gtggagttcaaggtagtggagacggaccccaacccttactgcattgtggccccagacaca
gtcatccactgtgagggggagcccatcaaacgagaggatgaagaggagtctctgaatgag
gttggctatgatgacattggtggtgtgaggaagcagctggcccagattaaggagatggtg
gagctgcccctgagacacccagcactgttcaaggccatcggcgtcaagcctccaagggga
atcctgctgtacggaccccctggaacaggaaagactctgatcgcccgtgctgtggcgaat
gagactggagccttctttttccttatcaatgggcctgagatcatgagtaaactggccgga
gagtctgagagtaacctgaggaaggccttcgaggaggctgagaagaatgcccctgccatc
atcttcattgatgagctggacgccattgcaccaaaaagagaaaagacacacggtgaggtg
gagaggcgtatcgtgtcccagctcctcacactcatggacggccttaagcagcgtgctcac
gtcatcgtcatggcagccaccaacagacccaacagcattgacgccgccctcaggcgattt
gggcgttttgacagggaggtggacattggcattcctgacgcaacaggcaggctggagatc
ctccagatccataccaagaacatgaaactgtccgacgatgtcgacctcgagcaggttgcc
aatcagactcacggccacgtgggtgctgacctggctgctctgtgctctgaagccgccctg
caggccatcaggaagaagatggatctcatcgaccttgaggacgagaccatcgacgcagag
gtcatgaactcccttgccgtcaccatggacgacttcagatgggctctgagccagagcaat
ccatctgccctgagagagactgtggtggaggtgcccaacatcagctgggaggacatcggt
ggtctggaggatgtcaagagggaactccaggagcttgtacagtacccagtggagcaccca
gacaagttcttgaagttcggcatgaccccatccaagggcgtgctgttctacggaccccca
ggttgcggtaagaccctgctggccaaggccatcgccaacgagtgccaggccaacttcatc
tccatcaaagggcccgagttgctcaccatgtggttcggcgagtctgaggccaatgtccga
gagatcttcgacaaggctcgccaggccgccccctgcgtgctcttctttgacgagctggac
tctatcgccaaggcgcgtggcggcaacgcgggtgatggtggcggagcagccgaccgtgtc
atcaaccagatcctgacggagatggacggcatgtccagcaagaagaacgtcttcatcatc
ggcgccaccaataggcctgatatcatcgacccggccatcctgaggcccggcagactggac
cagctcatctacatccccctgccagatgagaagtcccgcatcaacatcctcggagccaac
ctcaggaagtcacccatcgccaaggatgtggacctggatttcttggccaagatgaccaat
ggtttctctggagctgacctgacagagatctgccagagggcctgtaagatggccatcagg
gagtccatcgagaacgagatcaggagggaaagggagaggcagaccaacccctcagccatg
gaggtggaggaggacgaccctgttccagagatccgtaaggaccactttgaggaggccatg
cgtttcgcccgccgctccgtcagcgacaacgacatccgcaaatacgagatgttcgcacag
acgttacagcagagcagaggcttcggaagtttccggttccccactaactctgcgccaggg
gccgggcccagccagggctctgctggtggcagcggtggcacagtcttcaacgaggacaac
gacgacgacctctatggttaa
DBGET
integrated database retrieval system
