Oncorhynchus masou masou (cherry salmon): 135518303
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Entry
135518303 CDS
T10723
Symbol
lrsam1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135518303 (lrsam1)
04121 Ubiquitin system [BR:
omm04121
]
135518303 (lrsam1)
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135518303 (lrsam1)
Membrane trafficking [BR:
omm04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
135518303 (lrsam1)
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135518303 (lrsam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
zf-C3HC4_3
LRR_4
LRR_1
SAM_1
SAM_2
Prok-RING_4
LRR_LRWD1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
135518303
NCBI-ProteinID:
XP_064799448
LinkDB
All DBs
Position
28:75609009..75626265
Genome browser
AA seq
727 aa
AA seq
DB search
MPLFFRKRKPSEDSKKRLEYQLCLSKEVGAGDILDISACELTEVPTSAFSICKVLQKKVF
ILHGNQLKSLVPKGCCINFLVTLKVLDLHENMLTALPDDIGQLASLQVLNIENNQIKALP
DSIGNLRLLQTLNVKGNCLSQLPTSVGRMSSLRTLDLSENSVRELPRDLALARTLESLTL
DAALMSYPPASVCTMGTEDIQRFLCTELGEEYCPSSQFLLPVLESDSGKQSPDDVDSLEG
AWQSKFNDFEKRKEQKHQEKLAFERQLEQKQKEHHQLILMNNSHKENILLSVRQEQERLE
LGVSVQQRFQEVERQRILGKVRQAETGIANRINNLLLDNKRQRKSSEFLQQLEQDRIRME
HLTAITQEETNSLRKREVAVAMQKMLSESCSMRLMQEASDSRRQSLVSEACRSLESQDRK
FDQVLSLQQLDKSKAIACILQEEEMQKAAFQVLQLQKDSVHGYIQQQIRLIEGELMQLTK
LEVKRHNLDAENLQEVLWEQRSALSDLLQQLLKEKDQREVELRQVLQEMELKSDSNQQNY
WLIQYQRLLDAKPLLLRMQEVGVESDLVSLLCKLSAQHYLPIMAHHRVTSEALRHMTTKD
LRKLGINEMGIQKALLNWAREQPTTPSEGACKADPQEEEAVLSPSSLPSAPGETPTSTPP
LTPINPSAPSLIDGPGSSECVVCMETVSQVIFLPCGHVCCCQMCSDALQTCPLCRSNIAQ
HLRLYHG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgttcttcagaaagaggaagcccagtgaggactccaagaagcgtctggagtat
caactgtgcctgtctaaagaagtaggggctggtgacattctggacatctccgcttgtgag
ctcacagaggttccaaccagtgcgttctccatatgcaaggtgctacagaagaaggtcttc
attctccatggaaaccagctgaagtccttggtgcccaaaggctgttgcatcaactttctg
gtcacactaaaggtgttggatttgcacgagaacatgctgaccgccctccctgacgatata
gggcaactggcatccctgcaggtgctgaatatagaaaataaccagatcaaggccctgccg
gactccattgggaatctcagacttctgcagaccctcaatgtgaaaggtaattgtctaagt
cagctgcctacctctgtgggccgtatgagcagcctgcgcacacttgacctgagtgagaac
agtgtgagggagttaccccgggacctggctctggcacgcactctagagagcctgaccctg
gacgctgctctcatgtcctacccccctgcctcggtgtgcaccatggggactgaggacatc
caacggttcctctgcactgagctgggggaggagtactgcccctcatctcagttcctgctg
cccgtgctggagagtgactcagggaagcagagcccggacgatgtggatagcctggagggg
gcctggcagagtaagttcaatgactttgagaagagaaaggagcagaagcaccaggagaaa
ctggcatttgagcgtcagctggaacagaagcagaaggagcatcaccagctcatcctcatg
aacaactcccacaaggagaacatcttgctgtctgtcagacaggaacaggagcgtctggag
ctaggcgtgtcagtgcagcagaggttccaggaggttgagaggcagaggattctgggtaag
gtccgccaggccgagacgggcatcgctaaccgcatcaacaacctgctactggacaacaaa
cgacaaagaaagagttcagagtttctccaacagttggagcaggaccggatacggatggag
catctgacggccatcacacaagaagagaccaactcactcaggaagagagaggtagcagtg
gccatgcagaagatgttgtcagagagctgctctatgcgtctgatgcaggaagccagtgac
tcacgcagacagagtctggtctctgaggcctgcaggagtctggagagtcaggacaggaag
ttcgatcaggtgctttcactccagcagctagacaaatccaaagccatcgcttgtatccta
caggaggaggagatgcagaaggcagccttccaggtactgcagctgcagaaggacagtgtg
cacggctatatccaacaacagatcaggctaatagaaggagagttaatgcagctgactaaa
ctggaggttaagagacacaatctggacgctgagaacctgcaggaggtgctgtgggagcag
cgatcggctctcagtgacctgctgcagcagctgctgaaggagaaggaccagagagaggtg
gagctgagacaggtcctccaggagatggagctgaagagtgactccaaccagcagaactac
tggctgatccagtaccagaggctgctggacgccaagcctctgttgctacgcatgcaggag
gttggtgtggagagtgaccttgtcagtctgctgtgtaagctgtcagcccagcattatctc
cccatcatggcccaccacagagtcacttccgaggccctgcgccacatgaccaccaaagac
ctccgcaagctgggaatcaatgagatgggtatccagaaggctcttctcaactgggccagg
gagcagcccaccacgccttctgaaggggcctgcaaggccgatcctcaggaagaggaagct
gtcctgtcaccatcttctctgcccagcgcccccggcgagacacccacctccacccctcca
ctgacccccatcaacccctcagcccccagcctcatagacggcccgggtagctcagagtgt
gtggtgtgcatggagacagtgtctcaggtaatcttcctgccctgtggccacgtgtgctgt
tgccagatgtgcagcgatgccctccagacctgccccttgtgtcgcagcaacatcgcccag
cacctacgcctctaccacggctaa
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integrated database retrieval system
