Oncorhynchus masou masou (cherry salmon): 135518348
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Entry
135518348 CDS
T10723
Symbol
wrn
Name
(RefSeq) LOW QUALITY PROTEIN: bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omm03032
]
135518348 (wrn)
03400 DNA repair and recombination proteins [BR:
omm03400
]
135518348 (wrn)
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
135518348 (wrn)
DNA replication proteins [BR:
omm03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
135518348 (wrn)
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
135518348 (wrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
RQC
HRDC
HTH_40
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
135518348
NCBI-ProteinID:
XP_064799533
LinkDB
All DBs
Position
28:78302293..78343413
Genome browser
AA seq
1493 aa
AA seq
DB search
MTDLNMTDRNLPEWMSKIETTGKDALKQVQTGLYKRNVIEDDLPYLEFTGTVIFSQEKND
CSFLSDELRSSLSPGSAVGFDIEWPPSFTKGKKKKVALVQLCASVEKCYLFHLSPMSRFP
TGLKIFLEDETIRKVGVGIEGDMWKLLSDFDVKLKNFVELGDLANRRLRCGERWSLDGLV
KHLFKKRLFKQQDVRCSNWDDFELSQEQKRYAATDAYAGLIIHNKLNTMDPGVNSQSGLK
DKLSQMANEIEELAGSIPEEVNDIQSVATLVEDLYVSLTALRDLLSKNNTSASTIDPEPL
SHDPLENKPLSLDGTDTTNGTQMDQGSPREDEDLNHSNIDLFKVPEPMEEASKPIDYQGD
CIMSLDISEYELQMLERQAKQEDLEEQSTLEFQEKNALDDSADLLYGVELESEMLQCVEE
VERLTQQKQPQPEEMPSGPGNEEDDIEELEEEEEFDPSLPEPLPEQIKCLKMYFGHSRFK
PVQWKVIHSVLKERRDNLVVMATGYGKSLCFQFPPVYCVGVSIVICPLIALMEDQVLQLE
MSNIPACFLGSAQTKNVLAGLKQGQYRVVYMTPEYCSGNVSLLEQLDRSIGISLIAVDEA
HCISEWGHDFRGAYRSLGNLKRSLPNVRIVALTATASPSIREDIVKSLNLEQPIDCVLCS
GSLTCTLTVFLRPAHXRFPLTVFYLDIKIASCFCVSFAVGYFRGDYGFEGSSIVYCPSRK
EAERVTSTLTSLGVTCGVYHAGLGIKQRRETQHRFMRDEIQCIVATVAFGMGINKADIRK
VIHYGAPKEMESYYQEIGRAGRDGLPSACHVLWAPADLKLNRFLINQVANNKFRGYKLKM
MGKMDLYLNSSKCRRKLILSHFEDKQLRKVTSGIMGTDQCCDNCRSGAVNRVGVNDTMDG
GRQDYGVLAFQLMGAVSAMGERFGSSAPILFLRGSYSQRVPEKYRCHPLFGAGKSVPEPC
WKALARELVNEEYLKEATGTSKFCVLCKITPKGRWWLSRALDEKQRTLLLQSSDPDLNTW
SALRRKQNPAATTSAPDRQYSTSQNSRLNVCCRPVNSKSIPKLDMSSSSDRTPSKLLTQV
AVSKPQPAPISARELELQTALYAKLVAERQKLASEKDIPPAILATNKILLEMAKMRPCTV
SSLKQVDGVSEAKSSMLIPXLKTIASFCELHNLKVDSSILASAPGPESVRGAVTGRSSSL
PNSIAITYRLFQEEGKSMRQVSDVRSLPVAVLETQLIQAFRANHPLDTERAGLTTAIRTT
VSRIIQSHPVNSDLSDIKAIRARVPDDISTFLIQLTVELLQRQGMPTAPPAVSTSLQQPE
LTWIEPEDKPVRELSVNKPVRIEKDPAQPAPVELSPAPIKLSPAQPSPVELSPAQPVGWL
AVGLPDEMEMSMEEDDLFRDLPMPEEVGPVSEYVLAPKALTAAAKSVPQTSAVKLASWNQ
EPLDDDTQELFSDSPQNVSQPAKRKLPDWAELPRGSSSLACTKKTKKNKGLFS
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgacagatttaaacatgacggacaggaatttacctgagtggatgtcgaagatagaaact
actggaaaagatgcacttaaacaggttcaaacaggactctataaaagaaatgtcatagag
gatgaccttccttatctagagttcactggcacagtcatattcagccaggagaaaaatgac
tgctcttttctgtctgacgagttaaggtctagtctttcacctggctctgctgtggggttt
gacatagaatggcctccttcgttcaccaaaggcaagaagaagaaagttgccttggtccag
ctgtgtgcttctgtggagaagtgttacctttttcacctgtcccccatgtcaagatttcca
actggcttgaagatatttttggaggatgagacaatccgaaaagttggagtgggcatcgaa
ggagacatgtggaagctactctctgactttgatgtcaaactgaagaattttgtggagctt
ggagatttggcaaatagaagactgcgatgcggtgagaggtggagtctggatgggctcgtc
aagcacctgttcaagaagaggctgttcaaacagcaggatgtgcgctgtagcaattgggat
gactttgaactctcccaggaacagaaaagatacgcagctacagatgcttatgctggcctg
atcattcacaacaaactgaatactatggaccctggagtgaattctcagtctggcctcaag
gacaagctgtctcaaatggccaatgaaattgaggaattagctggcagcatcccagaagaa
gtcaatgacatccagagtgttgcaacgctagtggaggacctgtatgttagtctcactgct
ctgagagatttgctgtcaaagaacaatacctcagcttctaccatagatccagaacctttg
tctcatgaccccctcgagaacaagcccctcagtcttgacggaacagacacaaccaatgga
acacagatggatcagggctcacccagagaagatgaggacctcaatcactctaacatagat
ctctttaaggttcctgaacccatggaagaggccagcaaacccatagactatcaaggagac
tgcatcatgtccctggatatctcagagtatgagcttcaaatgctggagaggcaagctaag
caggaggatctggaggagcagtccactttggagttccaggagaaaaatgcactggatgac
tctgcagaccttttgtacggagtggagctggagagcgagatgctacagtgtgtggaggaa
gtggagaggttgactcaacagaaacaaccccaacctgaggaaatgccctctggccctggc
aatgaggaggatgacatagaggagctggaggaagaagaagaatttgatccatctcttcca
gagccactccctgaacaaatcaaatgtctaaagatgtattttggacatagtcgcttcaag
ccagtacaatggaaagtaattcactctgttctgaaggagaggcgagataaccttgttgtc
atggcaacagggtatgggaaaagcctgtgcttccagttccccccagtgtactgtgttggt
gtcagcattgttatctgtcctctcatcgctctcatggaggaccaagtgctccagctcgaa
atgtccaacattccagcttgttttcttggctctgctcagaccaaaaatgttttagccggc
ttgaaacaggggcaatacagagttgtatacatgaccccagaatactgctcaggcaatgta
tctctactcgaacagctcgatagaagtataggaatctctttgatagcagtggatgaggct
cattgtatctctgagtggggccatgacttcagaggtgcatacaggagtctgggaaacctg
aagagaagtctacctaacgtaagaattgtggcgctgactgccactgcaagcccatccatc
agggaggacatagtgaagagtctgaacctggagcaacccattgactgtgttctgtgttca
ggttcattgacctgcacattgactgtgttccttcgaccggcccattgaaggttcccattg
actgtgttctacctggacatcaaaattgcttcttgtttttgtgtctcatttgctgtcggc
tatttcaggggggattatgggtttgaagggtcctctattgtgtactgcccctcgaggaaa
gaggctgagcgtgtgacctccactctgacctcgctgggtgtcacgtgtggtgtataccat
gctggtctgggcataaaacagaggagggagacccagcatcgcttcatgagggacgaaatc
cagtgtattgtggctacagtagcttttggaatggggatcaacaaggctgacatcaggaag
gtgatccattatggagcccctaaggagatggaatcttactaccaggagattggacgtgct
gggagagacggacttccaagtgcctgccacgtcctgtgggcaccagcagatctcaaatta
aacaggtttctcatcaaccaggtagcaaacaacaaattccggggctacaagctcaaaatg
atgggcaaaatggacttgtatctcaactcatccaagtgcagaaggaagctgatcctctcc
cactttgaagacaaacagcttcgaaaggtgacctcgggcatcatgggaactgaccagtgc
tgtgacaactgccgatctggggcggtgaacagagtcggtgtaaatgacacaatggacggt
gggcgtcaggattacggtgtgttggcattccagctgatgggagccgtcagtgctatgggg
gagagattcggctcctcagcccccatcctgttcctccgtggatcatactctcaaagggtt
cctgagaagtaccggtgccaccctctgtttggagctgggaagagtgtccctgagccctgc
tggaaagccctggcacgggagctggtgaatgaggaatacctgaaggaagccaccggcact
agcaagttctgtgtcctctgtaaaatcacccccaaggggaggtggtggctgagccgagcc
ctggatgagaaacagagaaccctcctgctccagtcgagtgaccctgacctcaacacctgg
tctgcactaagacgaaagcagaaccctgcagccaccactagtgcccctgaccgacagtat
tccacctctcagaacagtaggttaaatgtctgttgtaggccagtcaacagcaaatctatc
ccgaagttggacatgtcatctagcagtgacaggacgccatccaagttgttgacccaggta
gcggtgtccaaaccacagccagcccccatctccgccagagagcttgaactgcagacggcg
ttgtacgccaagctggttgctgaacgacagaaactggccagtgagaaggacatcccaccg
gccatactggccaccaacaaaatcctcctggaaatggccaagatgaggccgtgcactgtg
tccagtctgaagcaagtggatggtgtttctgaggcaaagtccagcatgcttatacccntc
ctcaaaaccatagcaagtttctgtgagcttcacaacttgaaggtggactcctcgattcta
gcttcagccccaggtccagagagcgttagaggggcggtgactgggaggtcctcctctcta
cctaacagtattgccatcacctacagactgttccaggaggagggaaagagcatgaggcag
gtgtctgatgtccgcagtttacccgttgctgtgctagaaactcagctgatccaggccttc
agggcaaaccacccactggacacagagagagctggtctaacaaccgccatacgaactact
gtcagccgcatcatccagtcacaccctgtcaactctgacctcagtgacatcaaagccatt
cgagccagagtccccgacgacattagcaccttcctcatccagttgactgtggagctgctg
cagagacaggggatgcccacggccccacctgctgtttccaccagcctacagcagcctgag
ctcacctggatagaacccgaggacaaaccggtgagagaactttccgtcaacaagccagtg
aggatagaaaaagacccagcccagcctgccccagtagagctatcgccagcccccatcaaa
ctatccccagcccagccatccccagtggagctatccccagcccaaccggttggttggtta
gcagtcggactcccagacgagatggagatgagtatggaagaggatgacctgttcagggat
cttccaatgccagaggaagtgggtcccgtctcagagtatgtccttgcacctaaggctctt
actgcagccgccaagtctgtcccccaaaccagtgcagtgaagctggcatcctggaaccaa
gagccactggatgatgacacacaggaactcttcagtgactcccctcagaatgtcagccag
ccggcgaagagaaaactaccagactgggctgaactaccaagaggttcaagttctttggcc
tgtacaaagaaaaccaaaaagaacaaaggacttttttcgtaa
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integrated database retrieval system
