Oncorhynchus masou masou (cherry salmon): 135518949
Help
Entry
135518949 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135518949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135518949
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135518949
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135518949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
RING_XB3-XBAT31
zf-RING_UBOX
fn3
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
Ig_DSCAM-DSCAML_C
zf-RING_5
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
135518949
NCBI-ProteinID:
XP_064799996
LinkDB
All DBs
Position
29:complement(8325075..8383386)
Genome browser
AA seq
669 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCSPNEPVQSISAFQCPTCR
YAITLNQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERVAPDGTAMTSPSERVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTSHRLIEPMPDCHIRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYEKLKQTLDSNLSNLIKRNNELE
TLMGKLIQICQHVEGNASRQENKLLEECDLLMDVVQQRRQIIATKINEGKAIRLRKLAQQ
IATCKQIIERSSSLITQADHTLREGDHARFLQTAKSICERVSMATASSQILIPEINLNDT
FDTFALDFTREKKLLEGLDYLTAPNPPIIREELCTASYDTITAHWTSDDEFCVVSYELQY
AIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQCGTKYIFMVKAINQAGSRSSVPGK
LKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETSSKKSHNQDRFTSQGSYGVTGNVYIDS
GRHYWEALIGGSTWFAVGVAYKSAPKHEWIGKNSASWVLSRCNTSWVVRHNSKEMPIEPS
PHLRRVGVLLDYDAGSLAFYDGAGSQHLYTFDIAFAQPVCPVFNVWNKCLTVLTGLPIPD
HLEGTDCQD
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgcccaatctgtctggagctcttcgaggacccc
ttgctcttgccctgcgctcacagcctgtgtttcaactgtgcccatcgcatcctagtctcc
cactgcagccccaacgagcctgtgcagtccatcagcgccttccagtgcccaacctgtcgc
tatgccatcaccctcaaccagaggggcctagagggactcaagcgtaacgtcactttgcag
aacatcatcgaccgcttccagaaggcttccgtgagcgggcccaactcccccagcgagact
cgccgtgagcgggtcgccccggacggcacggccatgacctcccccagcgagagggtgcag
tgtcagttctgtgagcaagaccctccccaggatgccgtcaagacctgtgtcacctgtgag
gtgtcctactgcgacgaatgcttgaaggccacccaccccaataagaagcccttcaccagc
caccgtctgatcgagcccatgccggactgtcacatcaggggactcatgtgtctggagcac
gaggacgagaaggtgaacatgtactgtgtcacagatgaacagttgatctgtgccttgtgc
aaactggtcggtcggcatcgggaccaccaagtagctgccctcagcgaccgctatgagaaa
ctcaagcaaaccttggactccaacctcagcaatctgattaagaggaacaacgagttggaa
actctgatgggcaagttgatccagatctgccaacatgtggaggggaatgcatcaagacaa
gagaacaagctcctggaagagtgtgacctcctgatggacgtggtacagcagagaagacag
atcatagccaccaagataaatgagggaaaggctatccgtctgcgaaagctagcccagcag
atcgccacctgcaagcagatcatcgagagatcgtcatccctcatcactcaggcagatcac
accctgagggagggagaccacgcccgcttcctgcagacagccaaaagcatctgcgagaga
gtgtccatggcaacagcatcctctcagatcctgataccagagatcaacctgaatgacact
tttgatacgtttgcgttggactttacgagagaaaagaaactgttggaaggcttggattac
ctcacagcaccaaatcccccaataatccgggaggaattatgtacagcatcatatgacacc
atcactgctcactggacatcagatgacgagttctgtgtggtctcctatgagctgcagtat
gccatcttcactggacaagccaatgtcgtcagtttgtgtaactcagctgacagttggatg
attgtgcccaacatcaagcagaaccactacacagtgcatggactccagtgtggcaccaag
tacatctttatggtcaaagctatcaaccaggcagggagtcgcagcagtgtacctgggaag
ctcaagaccaacagtcagccgttcaagttagacccaaagtctgctcacaagaagctgaag
gtctcccacgacaacctgacggtggagcgagacgagacgtcgtccaagaagagccacaat
caggaccgcttcaccagccagggcagctacggcgtcacagggaatgtgtacatcgacagc
gggcgccactactgggaggccttgataggagggagcacatggtttgctgtgggcgttgct
tacaagtcagcaccgaaacacgagtggatcggcaagaactcggcctcgtgggtattgtct
cgctgcaacacctcctgggtagtacgtcacaacagcaaggagatgcccatcgagccgtcc
ccccacctgcgtcgcgtgggggtgttgttggactacgacgccggttccctggccttctac
gacggcgccggctcacagcacctgtacacgttcgacatcgccttcgctcagccagtctgt
cccgtgttcaacgtgtggaacaagtgtctgactgttctcacggggctgcccatcccagac
cacctcgaggggacagactgccaggattaa
DBGET
integrated database retrieval system
