Oncorhynchus masou masou (cherry salmon): 135518986
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Entry
135518986 CDS
T10723
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04622
RIG-I-like receptor signaling pathway
Brite
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135518986
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135518986
mRNA cycle factors
Common to processing body (P body) and stress granule
135518986
Spliceosome [BR:
omm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135518986
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
135518986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135518986
NCBI-ProteinID:
XP_064800070
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All DBs
Position
29:complement(11976086..12004444)
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AA seq
701 aa
AA seq
DB search
MSHVVVDNPHGLDQQLAGLDLNSDGQGGGTGRRYIPPHLRNKEVSKNDSPGGWDGGRSNG
FTNGYHDNRNGGRGGPPRNDRGFGGGQDGGGWGSAPRQDAAYNSFGGRGKSSFYSDRGST
GGRGGYQRGGYGGGGGNNRWQEDSRDDEDWSKPSPANERLEAELFSSGNTGINFEKYDDI
PVEATGSNCPPHIDSFHDVDMGEIIMSNIALTHYTRPTPVQKYAIPVIKSKRDLMACAQT
GSGKTAAFLVPVLSQIYTQGPGDAAAAAKNGQDSGKYGRRKQYPLSLVLAPTRELALQIY
EESRKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCNY
LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGIRQTMMFSATFPKEIQMLARDFLEDYIFL
AVGRVGSTSENITQKVVWVEDGDKRSFLLDLLNATVIPSDAPDVQEAAVTPGKESLTLVF
VETKKGADALEDFLYREGYACTSIHGDRSQRDREEALNQFRSGRCPILVATAVAARGLDI
SNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNSNITKDLLDILVEAKQEV
PSWLESLGYENQHKGNTGRGRSKRFSSGGFGARDYRQTPGGGGFGGGGGRGGPRTGGHGG
GGSRGGFGGGGFGGGNSYGGNDAGYGGNYSHSGSGTDWWGN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcgtcgataatccacacggtctagatcagcagcttgctggcctagac
ttgaactcagacggacagggaggaggcactggccggcgttacattccacctcacttgagg
aacaaagaggtttccaaaaacgactctccgggaggatgggatggcggacgcagcaacggc
ttcaccaacggttaccatgacaaccgcaacgggggacgcggcgggcctccccgaaatgac
agagggtttggtggtggacaagatggtggaggctggggaagtgctcccagacaagatgca
gcctataacagctttggagggaggggcaagtcttccttctacagcgaccgtggatcaaca
gggggcagagggggttatcagcgtggagggtatggtggtggtggtggtaacaaccgctgg
caggaagactccagagacgacgaggactggtccaaacccagccccgctaacgaacgcctg
gaagcggagttgttctcaagcggcaacactggtattaactttgagaaatacgatgacatt
cccgtggaggccactggctccaactgcccgccacacatcgatagtttccatgatgtggac
atgggggagatcatcatgagtaacattgccctgacccactacacacggcccacccccgtc
cagaaatacgctatccctgtcattaagtccaagagagacctcatggcctgcgctcagact
ggctcgggtaagactgcagccttcctggtgccagtgctgagccagatctacacacagggg
cccggagacgccgcagcggctgccaagaacggacaggacagtggtaaatatgggcgccgt
aagcagtatcccctctctctggtcctggctcccaccagagaactggccctgcagatatac
gaagagtccagaaagtttgcgtaccgctcccgtgtgcgtccctgcgttgtgtacggaggg
gctgacatcggccagcagatcagagacttggagcgaggctgtcatcttctggtggccaca
cctggacgcctggtggacatgatggagaggggcaagattggcctcgactactgcaactat
ttggtgctggatgaggctgacaggatgttggacatgggttttgaaccccagatcagacgc
atcgtggagcaggacaccatgccccctaaaggcatccgtcagaccatgatgttcagcgct
accttccccaaggagattcagatgctggcgcgtgacttcctggaggactatatcttcctg
gctgtgggccgtgtgggctccacctctgagaacatcactcagaaggtggtttgggtggag
gacggtgacaagcggtccttcctcctggacctgctgaatgctacagtcattcccagtgac
gctcctgatgttcaggaggctgcagtgacacctggtaaggagtctctgacgttagtgttt
gtggaaaccaagaagggagcggatgccctggaggacttcctgtaccgcgagggctacgcc
tgcaccagtatccacggagatcgctcccagagagacagggaggaggcgctgaaccagttc
cgctctggacgctgtcccatcctggtggccaccgcggtggctgctcgtggtctggacatc
tccaacgtcaagcacgtcatcaactttgacctgcccagcgacatcgaagagtacgttcac
cgtattggtcgtaccggtcgtgtggggaacctgggtctggccacgtcgttctttaacgac
aagaacagcaacatcaccaaagacctgctggacatcctggtggaggccaagcaggaagta
ccctcctggctggagagcctgggttacgagaaccagcacaagggcaacacgggacgtgga
cgctctaagaggttttcctctggtggatttggtgccagggactaccgccagacgcccggc
ggcggtggctttggtggaggtggtggacgcggcggccctcgcaccggaggtcacggagga
ggaggaagtcgtggcggcttcggtggaggtggctttggaggcgggaactcctatggtggt
aacgacgctggctacggtggcaactacagccactccggtagtggaactgactggtggggc
aactag
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