Oncorhynchus masou masou (cherry salmon): 135519005
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Entry
135519005 CDS
T10723
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135519005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135519005
03021 Transcription machinery [BR:
omm03021
]
135519005
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
135519005
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
135519005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
DUF3839
T6_Ig_like
Motif
Other DBs
NCBI-GeneID:
135519005
NCBI-ProteinID:
XP_064800102
LinkDB
All DBs
Position
29:12471734..12510731
Genome browser
AA seq
758 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNVSETSTCGMESQSGDGNTEIQTNGLDFQRQTVQTTSAIT
NAHTQALLQQSKSEDSGAIPTSVQQGVLPQAQLMLAGGQIAGLTLSPAQQQLLLQQAQAQ
LLAAAMQQQSASQQSSTTGASISASAATPITQLPLSQPIQITSIPSGSTHLPGQLSQLGY
PYEMATFNSYLPQLQQLQQQNLTMPQFVLVQPGHHIATQLQPGQFIISQSPQGQQSLLQG
QSLLTQLPQSQANLLQTHPSITLSTQPATPTRTIAATPIQPLSHSQTSPPKRLATPSLEE
PSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCK
LKPLLEKWLNDAVYADNLSSDQALSSPSALGSPGLGMEGLNRRRKKRTSIETNIRLALEK
RFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSGGYSNTGTGSSPIK
TIFTPTIPLVASTASLVTSNTPTTLTVNPVMPLNSTSVSGLTFTGTTIGATTNTASVIST
APMVTAVTSSPSLSPSPTALQATAAETGGTQEHTVVTQAPSSLATTLGTGQVMVAGLGLS
AALQGAAQLPTSASFAAMAGLNQGLMASSQFTPGGALLSLAPGGLGGALNPAMLSNSTLA
TIQGLWSALASGGALPITSLDGSGNLLFANTSAGSTPNLMQPLFLNPQNLSLLTTNPVNL
VSAGAAGGGALQVSADHQVTTATVPVPASTITTASRAQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatgtgtcagaaacgagtacatgtggaatggagagtcagagtggggacggcaacacagaa
atccaaacgaatggactggactttcagaggcagactgttcagaccacaagcgcaatcacc
aacgcacacacacaggctctcctccaacagtccaagtcagaagactcgggtgcaattccg
acctccgtccagcagggcgtgctgcctcaggcccagctcatgctggctgggggacagata
gctggattgaccctgtctccagcgcagcagcagttgttgttgcaacaggcccaggcccag
ctcctagcagcagccatgcagcagcagtcagccagccagcagagcagcactacgggggcc
agcatctctgcctctgcagccacccctatcacacaactacccctgtcccagcccatccag
atcacctctattccctctggttctacccatctcccaggccagctcagccagctgggatac
ccctatgagatggcgaccttcaacagttacctacctcagttacaacagctgcagcagcag
aacctgaccatgccccagtttgtcctggttcagcctggccaccacatcgctacccagctg
cagcctggccagttcatcatctcacagtcaccacagggccagcagagtctcctgcaaggc
cagagtcttctaactcaactacctcaaagccaagccaacctcctgcagactcatcccagc
atcacgctctccacacagccagcgactccaacccgcacgatagcagccacgcccatccag
cctctgtcccacagccagacctcaccccctaaacgcctggccacacccagtctggaggag
cccagtgacctggaggagctggaacagtttgccaagaccttcaaacagagacgcatcaaa
ctgggcttcacacagggagatgttggcctggctatgggcaagctgtacggtaacgacttc
agccagaccaccatctcccgctttgaggccttgaacctgagctttaagaacatgtgcaag
ctgaagccactgctggagaagtggctcaacgatgcagtttatgcagacaatctgtcgtct
gaccaggccctgtccagccccagcgccctgggctcccctggcctgggtatggaggggctg
aaccgccgacgcaagaagaggaccagcatcgagaccaacatccgtttggccttagaaaag
agatttctggaacagaaccaaaaacctacctctgaggagatcaccatgatcgccgaccag
ctcaacatggagaaggaggtgatccgggtgtggttctgtaaccgccggcagaaagagaag
aggatcaacccccccagcggtggatatagcaacacagggacaggcagcagccccatcaaa
accatcttcacccctacgatccccctggtggccagtacggccagccttgtgaccagtaac
acaccgaccacactgactgtaaacccagtgatgcctctcaacagcaccagcgtgtctggc
ctgacgttcacaggcacgaccataggagcgaccacgaacacggcgtctgtcatctccacg
gcacccatggttactgcggtgaccagctccccatcgctaagcccctcccccacggccctc
caggccacggcggcggagacgggcggaacccaggagcacacggtggtcacgcaggcaccg
tcgtccctagcgaccactctggggacgggtcaggtgatggtggctggactgggcctgtcg
gccgccctgcaaggcgccgcccagttacccaccagcgcgagtttcgccgccatggccggg
cttaaccaaggacttatggcgtcatcgcagttcactcctgggggggccttgctgagcttg
gctccaggggggctgggaggggctctgaaccccgccatgttgagcaacagcaccctggcc
accatccaaggtctgtggagcgctctggcatcaggcggtgctctccccatcacctcgctg
gatgggagcggtaacctgctgttcgccaacacctccgccggcagcacccccaacctgatg
caacccctcttcctgaacccccagaacctgtccctgctcaccaccaaccctgtcaacctg
gtgtcagccggagctgctgggggaggggccctgcaggtctcagctgaccaccaggtcacc
acggcgactgtaccagttcccgcctccaccatcaccactgcctccagggcccagtga
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