Oncorhynchus masou masou (cherry salmon): 135519027
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Entry
135519027 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 3-like
KO
K15195
AF4/FMR2 family member 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135519027
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
135519027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
Motif
Other DBs
NCBI-GeneID:
135519027
NCBI-ProteinID:
XP_064800131
LinkDB
All DBs
Position
29:complement(13557457..13597068)
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AA seq
1381 aa
AA seq
DB search
MPTVLRGTGKLSIVCSLIRCASQVTGSERNGCSKDILGDMTHSWPSQQPSGGSQGQRFLY
NPKEAKQHTTQQTWENVQQLRMTQPHVAPHKSMLADDLKLSSDEEDADKDPEQSASWTGN
NSLSEQHTHTHGGRVRQSCSDSSGSDSSGSSESEEEEEEEEEEEESSSQRLRSPSPETHS
DPGTPTDAQSLGCTEETDHPLITQWQLDKWLKKVRKKSSSWDSSNRDHTQRATEHSSPSP
DPHRAPSPARSWGTREDYSPGQSPVPSPHFNYSPRHSPRPSPRPSPGYSRCPSPCHSPRH
SPILSPVPSVCPSPCLSPRASRDPSPIPRHPPKSPSPSLTQSSSRPYPQVRSLHQESFRP
LTRPSLTSSPSHRPKIRIAPAPSFESKSKLRHSSSPQPPLQHGSRPKPKQSKSVPTPKNT
AKAAPALSTEPSHRPRPSPNSSPRLHSQPRLKHNPILALKTSQQLTTSGQRPKESSRLSH
NSNSKPRPKFGPSLITSLSTSPCPTPRAKILPPADPSRETSSRVGHSSKSSPKPHSRLIS
KAGSGPSSRSSPSPIPKVKSRENPAPHPKPPQRKSQSREREREVDNRRETQAADRKADRQ
AEGRGRGNVERQGERPGEKQGERRLAEDKLLRRPWVQSSEEEEDVEERKRRREEGEKEEK
RRRRKEQQQQRGEWQAVQPKQRPHTNSERHRNPIDPQRHGTKKKRRRKSEEEEGESQPDP
SLPPSPSSPTPVIPPTDSSSSSSSSSESDSEPSLPPNVAKVPADSTSSQRPIQERAPGPG
RPSDIRPGVLYPTATSNQDHGPQSQTKQKLYTLVPFGRSEQAPSSHRGLRNLVVQLNLSL
LSRVPDTTTDTPASHKHPSSSSSKQKEAMRHLYTPETEGGDSRRKRKSENGIQHHRESKR
SNPHTEPTANRESKRSNPHTNGPSAHTESKRSNPHTEPTANRESKRSNPHTEPTANRCLD
PHTESTANRESKRSNSHTNGPSAHTESKRSNPHTEPTANRESKRSNPHTEPTANRCLDPH
TESTANRCLDPHTESTANRCLDPHTDARHNRFLEDYLDSKRPLSPLSPLSDTPDPTKPPI
KTQPPVQHYTNSEVPRSHAKMEVECVGVSGKPPHMCESWGPPLQRAGSQRGTVLNHEPPH
HAEYYMHEAKRMKHRADAMVDKLGKAVNYVDAALSFMECGKAMEEGPLEDKSPYTMYTET
VELIRYAMRLKNHSGPGARQEDKQLAVLCFRCLALLYWQMFRLKKDQAMKYSKVLVDYFK
SSPKVPTTPPIWSVSGTGTGGPPSSLSPSPSALPLGSSPSSLINIPLRIHQMAANHLNIT
NNVLYSYEYWELAESLVRDNNEFFNYLNTLSGPLTLHSSIAHAVQYTRQGLQWIRISASV
G
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagtcctccgcggcacgggaaaactttccatcgtgtgttcactgattcgttgc
gcatctcaggtcacaggaagtgagcgtaacggctgttccaaagatattctaggggacatg
acccattcctggccatcccagcaaccctcaggagggagtcagggccagcgcttcctctat
aaccctaaggaagcaaagcagcacacaactcagcaaacttgggagaatgtgcagcagctg
aggatgacccagcctcacgtggcgcctcacaaatccatgctcgctgatgacttgaagctc
agcagtgacgaggaggatgctgacaaggaccctgagcagtcagcctcctggactggtaac
aatagtctgtcggagcagcacacacacacacatggtgggagggtgagacagtcatgctca
gactcttcaggctcagactcttcaggctccagtgagtcagaggaggaggaggaggaggag
gaggaggaggaggagagcagtagccagcgccttcgtagccccagcccagaaacacactcc
gatcctgggacacccaccgacgctcagtccctcggctgcaccgaggagacagatcacccc
ctcatcactcagtggcagctggataagtggctgaagaaagtccgaaaaaaatcctcctcc
tgggattccagcaaccgtgaccacacccagagagctacagaacacagctcgccctcccca
gatccccacagagccccgtctccagccagatcctgggggaccagagaggattacagcccc
ggccagagccctgttcccagcccacacttcaactacagccccaggcatagccctcggcct
agccctcggcctagccctggctacagccgctgtcccagtccttgccacagcccaagacac
agccccatccttagcccggtccccagtgtctgtccgagcccctgcctcagccccagagcc
agccgcgaccctagccccataccccgacacccccctaagagtcctagtcccagccttact
cagtctagctcccgtccctatcctcaggttcggagtcttcatcaggaaagcttcaggcct
ctcacgcggcctagcttaacatccagcccaagccatagacccaaaatcaggatcgcacct
gctcccagctttgagtccaagagcaaactgaggcacagttcctctccccagcctccactt
cagcacggctccaggcctaaacccaaacagagcaagtctgttcccactcccaagaacaca
gccaaggcagcccctgctctgagcactgagccgagccacagacccagacctagtcccaac
tccagtcccaggcttcattctcagcctcggttgaaacacaaccccatcctagcactcaaa
accagccaacaactaacaacctctggacaaaggcccaaggagagtagcagactcagccac
aattccaactccaaacccaggcccaagtttgggcctagtttgataaccagcctcagtacc
agtccctgtcccacacccagggccaagattttacctcccgcagaccctagcagagagacc
agcagcagagttggtcacagttccaaatcgagtcccaagccacattctcggctgatctcc
aaagctggttctgggcctagctctagatccagccccagtcctatacccaaagtcaagtcc
cgggagaaccctgctccccacccaaagcctccacagaggaagtcccaatccagggagaga
gaacgggaggtggacaaccggagagagacccaggcagcagacaggaaggcagacaggcag
gcagagggaagggggcggggtaatgtagagagacagggagagaggccaggggagaaacag
ggagagagaagactggcagaggataagttgctaagacgcccctgggtccagagttcagag
gaggaagaggacgtagaggagagaaagaggaggagggaggagggagagaaggaggagaag
agaaggaggaggaaggagcagcagcagcagagaggtgaatggcaggcggtccagcccaag
cagagacctcacaccaacagcgagcgacaccgcaatcccattgatccacaacgccacggg
accaagaaaaagaggaggaggaagagtgaggaggaagagggagagtctcagccggaccct
tcccttccgccgtcgccctcctcccccacaccggtcatccctcccacagattcctcttct
tcatcatcttcctcatcagagtccgactcggagcccagtctgcctcccaacgtcgccaaa
gtcccagccgactccacgtccagccagcgtcctatccaggagagggcaccaggccccggg
aggccttcagacatcaggccaggagtgctctaccccactgccacatccaaccaagaccac
gggccgcagagccagacaaagcagaaactctacaccttggtcccgtttgggcgtagtgag
caagccccatcctcgcatcgaggcctgaggaatctggtggtgcagttaaacctctccctg
ctcagcagagtgcctgatactacaacagacaccccggcctctcacaaacacccctcctct
tcctcttccaagcaaaaagaggccatgagacacctgtacaccccagagacagagggagga
gacagcaggaggaaacggaagtcagagaatggaatccagcaccacagagagagtaaacgg
agtaacccccacacagagcctacagctaacagagagagtaaacggagtaacccccacacc
aatggcccctcagcccacacagagagtaaacggagtaacccccacacagagcctacagct
aacagagagagtaaacggagtaacccccacacagagcctacagctaacagatgtctagac
ccccacacagagtctacagctaacagagagagtaaacggagtaactcccacaccaatggc
ccctcagcccacacagagagtaaacggagtaacccccacacagagcctacagctaacaga
gagagtaaacggagtaacccccacacagagcctacagctaacagatgtctagacccccac
acagagtctacagctaacagatgtctagacccccacacagagtctacagctaacagatgt
ctagacccccacacagatgccagacacaacaggttcttggaggactacctagacagtaag
aggccactgtcccccctgtcccctctctctgacaccccggaccccaccaagcctcccatc
aaaacacagcccccagtgcagcactacacaaacagtgaggtgcccaggtcccatgctaag
atggaggtggagtgtgtaggtgtgtcagggaagcccccgcacatgtgtgaatcctgggga
cctcctttacaacgggcagggagccagagaggaactgtactcaaccatgaacccccacac
catgctgagtactacatgcatgaggccaagagaatgaagcaccgtgcagatgccatggtg
gataagttggggaaggcagtgaactatgtggatgctgctctctccttcatggagtgtggc
aaagctatggaggagggaccactggaggacaagtcaccctataccatgtacacagagacg
gtagagctcatcaggtatgccatgaggctgaagaaccactctggtcctggggccagacag
gaagacaaacagttggccgtactgtgtttccggtgccttgctctcctgtactggcagatg
tttcgtctgaagaaggaccaagccatgaagtactccaaagttctagtggactactttaag
agttctcccaaagtgcctactacaccccccatctggagcgtctcaggaacgggcacaggg
gggcctccctcctctctctcccccagcccctcggccctccccctgggcagctccccctct
tccctcatcaacattcccctgcgtatccaccagatggcagcaaaccacctgaacatcacc
aacaatgtcctatacagctatgagtactgggagctagcagaaagcctggtcagagacaac
aatgagttctttaactacctgaatacactgtcagggccattgactctccacagtagcatt
gctcatgcagtccagtacaccagacagggtctgcagtggatccgcatcagtgccagtgtg
ggctag
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