Oncorhynchus masou masou (cherry salmon): 135519221
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Entry
135519221 CDS
T10723
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR-like
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
135519221
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
omm04050
]
135519221
Cytokine receptors [BR:
omm04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
135519221
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Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
SCIMP
DUF4501
TNFR_c6
RIFIN
Motif
Other DBs
NCBI-GeneID:
135519221
NCBI-ProteinID:
XP_064800404
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All DBs
Position
29:complement(23962054..24005717)
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AA seq
481 aa
AA seq
DB search
MFQKGSNIESLFLCLLLVSCPPCLRSEYSSCGEFEFYNQTFSSCRPCPPCQPGQEPHMNC
GYGTKDENFVCVSCPAGKYSKGKYEICRRHKDCEGLYRATVLTPGTPDSDADCGPCLPGY
YIQENRPRNLYGMVCHSCQNAPRNTKECMLTKVPSVSTSSTTMFPHPHKDATGQGHLATA
LIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVVKAVEAQTNKQEDKKDVPDNVV
IFSEKDEFDKLKPTPPKTVKSENDASSENEQLLSRSMDSDEEAALERQGAADPNPSLCLL
NLGNKPDLCLLSLGLLDRDKTGSNPTSPINANNISNGNANIINNNNYNKATGIQSRRKKI
LDLYARACSVAEGLSPTELPFDCLEKASRMLSSSYSSEAAVVKTWRHLAESFGLKRDEIG
GMSDGLQLFERISTAGYSIPDLLTRLVQIERLDAVESLCSDVLGGGDTHTVPLSSPRCAS
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaaaggaagtaacatagagtccctcttcctctgtttgttgttggtgtcctgt
cctccctgtctcaggtcagagtacagtagttgtggagagtttgaattctacaaccagacc
ttcagtagctgccggccctgccccccatgccaacctggacaggaaccccacatgaactgt
ggctatgggactaaggatgagaactttgtgtgtgtgtcttgtcctgcggggaagtactca
aaggggaagtatgagatctgcaggagacataaggactgtgaaggtctgtaccgcgccaca
gttctcacacctgggacaccagacagtgacgcagactgtggaccctgcttacccgggtat
tacatccaggagaaccggcccaggaacctgtatgggatggtctgtcactcttgtcagaac
gcacctcgcaacactaaagagtgcatgcttaccaaagtccccagtgtctcaaccagcagt
actaccatgttccctcaccctcacaaagacgccacaggacagggtcacttagcaaccgct
ctcatcattgccatgtcaaccatcttcatcatggccatcgccatcgtcctcattatcatg
ttctacatcctcaaagccaagcccagcggacaggcgtgctgctcaggtcaggtggtgaag
gctgtggaggctcagaccaacaaacaggaggacaagaaagatgttccagacaacgttgta
attttctctgaaaaggatgaattcgacaaactcaaacccacgcctccgaagacggtgaaa
agtgagaacgatgcatcgtcagagaacgagcagctgttgagtcgtagtatggacagtgat
gaggaggcagccttggagaggcagggggcggctgatcctaaccccagcctctgtcttctg
aacctgggcaacaagccggacctctgcctgctctctctggggcttctcgacagggataag
actggatccaaccccaccagccctatcaacgctaacaacattagcaatggcaatgctaac
atcatcaataacaacaactacaacaaggctacagggattcagagccggaggaagaagatc
ctggatctgtatgctagagcctgcagtgtggccgagggtctgagtcctacagaactaccg
tttgactgtctggagaaggccagtcggatgctgagctcctcctacagtagcgaggcagcc
gtggtgaagacctggagacacctggcagagagctttggcctgaagagggatgagatcgga
gggatgagtgacggcctgcagctgtttgaaaggatcagtaccgccggctatagcatccca
gacctgctcaccagactggtgcagatagagagactggatgctgtggagtcactgtgttct
gatgtactgggaggaggagacacacacactgttcctctgtcctcaccacgctgtgcaagc
gtctga
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