Oncorhynchus masou masou (cherry salmon): 135519299
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Entry
135519299 CDS
T10723
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135519299
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135519299
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
135519299
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
135519299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_DAAF5
Cnd1
Sec7-like_HUS
RTP1_C1
Dopey_N
ParcG
TAN
MMS19_C
DUF2726
Motif
Other DBs
NCBI-GeneID:
135519299
NCBI-ProteinID:
XP_064800517
LinkDB
All DBs
Position
29:complement(29806743..29898490)
Genome browser
AA seq
1637 aa
AA seq
DB search
MEVNMEYCLAQVVQKDLGRKVQVGQELIDYIVDKEKSQDLEQDQTALDRMVDGIATTWVN
SSNFKVALLGIDLLSALVTRLQDRFRNHVGTVLASLIDRLGDSKDQVRDQDQILLLKIME
QAASPQYVWDRMLGGFKHKNNRTREGACLCLISTLNMYGAQGLTLSKIVPHICNLLGDPT
SQVRDAAMGCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSRFDEVQRSGNMIPSSGSDK
NFDDEDSVDGGRSSSSASSSKAPPSGRRAVAAASVRRPSSATGPGKISAKDAAAGAVDEE
DFIKAFEEVPTIQIHSNRDMEDNLSKVREVLSDDKNDWEHRVVALKKVRSLLVAGALDYD
SFPQQLRLLEAPLKLSAKDLRSQVVREACITLGYLSTLLGNKFDHCAETLMPTLLNLVPN
SAKVMATSGMAAIRLILRHTHYSRLIPIITSNCTSKSVAVRRRSYEFLELLLLEWQTHTL
ERHVAVLTETIKKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESTYQKALQSHL
KSSDSVVSLPQSDRSSSSSQESLNRPLSVKSAIGGSMTRGKMVSSRVNSNSGGSLQRSRS
DVDVNAAASAKSRLITVPSASPFSSAAALPPGSYASLDGTPGKIDTGRVRTRRTSSGNAV
GASATVTDSRGRSRAKMMSQSQRSRSANPTGGGKARTSSNQTGSRSSSPGKLLGHSSGYG
RISRPPSASSTPADKRSKVPRSQGCSRDSSPNRLGLARSRIPRPSMSQGCSRDTSRESSR
DTSPARGFKPLASRRTSRSTSALSTADPHSQSDRFGLIHQARISASVNAMRVLNTGTEVE
AAVADALLLGDSRNKRKPMRRRYESPGIYSDDDANSDASSACSERSYGSRNGGIPHYLRQ
TEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKVF
SMFLETLVDFILVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPFDQ
QFNILMRFIVDQTQTPNLKVKVAILKYIESLGRQMDPTDFVNSSETRLAVSRIITWTTEP
KSSDVRKTLHNWVVEELSGRSGTAALLEGHLEERCKQAAQVVLISLFELNTPEFTMLLGA
LPKTFQDGATKLLHNHLKNSSNTSSVSSPSNTIGRTPPRHTPSRTSPLTSPTNCSHGGLS
PSRLWGGCWSGDGLSKHPPPPHPPPPPSTPSGPALRVLRRAYSPSMLEYDTENMNSDEIY
SSLRGVTEAIQSFSYRSQEDLNEPRGKRDDTVGREGVASSPGSDARLGLDVVEGGRTALD
NKTSLLNTPSPRSFSGPRAREFAPYGYGDTITSSYDKSALKEAVFDDDVEQFRDCRRQDG
SGENKMVLPKGFAPGSQDHSDLVADLLKELSNHNERVDERKGALVELLKITREDSLAVWD
EHFKTILLLLLETLGDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHK
EVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERITKESLHQL
LPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLQLLTGSKMKLLNLYIKRA
QTTNSNSSSSSDVSSHS
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaatatggagtattgtctggcccaggtggtgcagaaagacctggggcggaag
gtgcaggtgggacaggagctcatagattacatcgtggataaggagaagtcccaggacctg
gagcaggaccaaacggctctggacaggatggtggacggcatcgctaccacctgggtcaac
tcctccaatttcaaggtggcattgctaggtatagaccttttatctgccttagtgacaagg
ttacaggaccgatttaggaaccatgtgggaacagtgctggccagtctgatagatcgtctg
ggtgattccaaagaccaagtcagagaccaagatcaaatcctgctcctgaagatcatggag
caggctgcctccccacagtatgtttgggacagaatgctgggaggcttcaaacacaagaac
aacaggaccagagagggagcgtgcctttgtctcatctcaactctcaacatgtacggagcc
caaggcctaaccctcagtaaaatagtccctcacatatgtaatcttctaggggatcccacc
agtcaggtgagagacgcagctatgggctgcctggtggagatctacagacacgtgggggag
agggtgaggatggatcttagcaagaagggcctgccacagtcacggttgaatgtaatcttc
agccgatttgatgaagtccaaagatctgggaacatgatcccatcctcaggttcagataag
aactttgatgatgaggactctgtggacgggggccggtcctcctcctctgcatcgtcctcc
aaggcgccccccagtggtaggagggctgtagctgcggcttctgtccgcaggcccagctct
gccaccggacccggcaagatctctgctaaagatgctgctgcaggtgctgttgatgaggag
gacttcatcaaggcttttgaagaggttcctactatccagatccactccaacagagatatg
gaggacaatctctccaaggttcgggaggttctatctgacgacaaaaacgactgggagcac
agagtcgtcgccctgaagaaggtgcgttctctgctcgtggctggagccctggactatgat
agtttccctcagcagctccgtctgctggaggcccctctcaagctgtcagcgaaagacctg
aggtcccaggtggtacgagaggcctgcatcacactgggatacctgtccacgttgctggga
aacaagtttgaccactgtgcagagaccctgatgcccacactgctcaacctggtgcccaac
agtgccaaggtgatggccacgtctggcatggcagccatacgtctcatcctcaggcacaca
cactactcacgtctcatccccatcatcactagtaactgcacgtccaaatcagtggccgtc
cgaaggcgcagttatgagttcttagagctgttattactggagtggcagacacacacactg
gagaggcacgtggctgttctgactgaaaccatcaagaaagggatccatgatgctgactca
gaggccagatcggtcgcgagaaagtgttattggggtttccatggccactacagccgggag
gcggagcatctgttccaggccctggagtcaacctatcagaaggctctgcagtctcacctg
aagagttctgacagtgtcgtgtctctcccccaatcagaccgctcatcctcctcctcacag
gagagcctcaaccggcccctgtctgtcaagagtgccataggaggcagcatgacaaggggt
aagatggtgagttccagggtgaactccaactccggcggttcccttcagcgttcccgtagt
gatgtcgacgtgaacgccgcggccagcgccaagtcacgcctgatcaccgtgccctccgct
tctcccttcagctcagcagctgccctgcccccaggctcctacgcctcactagatggcaca
cccggtaaaatagatactggccgtgtgcgtacgaggagaacaagctccggcaatgctgtc
ggagccagcgctactgtgactgacagcagggggcgcagccgagccaaaatgatgtcccag
tcccagcgatccagatctgctaaccccactgggggtggtaaggcccgaacttcatccaat
cagactggcagtcgctccagttcccctggcaagctgctgggccactcgtctgggtacggg
aggatcagcaggcccccctcagcctccagcacccctgcagacaagaggagcaaggtcccc
cgcagccagggctgcagtagagattcctctcccaacaggctgggcctagcaaggagccgt
atcccccggcccagcatgagtcagggctgcagcagggacacatctagggaaagcagcaga
gacaccagccctgctcggggcttcaagcctcttgcctcccgacgtacctcccgctctacc
agcgccttatccacggctgacccccacagccagtcagaccgatttggtttgatccaccag
gcccgcatttctgcctcagtgaacgccatgagagtcctcaacactggcactgaggtggag
gctgctgtggctgacgcactgctattaggagactccagaaataagcggaagcctatgagg
cggcgctatgagtctcctggtatctactctgacgatgacgctaacagtgatgcgtccagc
gcctgctcggaacggtcgtacggctcccggaacggaggtatccctcactacctgcgtcag
acagaggatgtggcagaggtactcaaccactgtgccagctccaactggtctgagaggaag
gagggactgctgggactgcagaacctgctgaagagtcaaagaatactcagccgggtggag
ctgaagagactctgtgaaatcttcaccaggatgttcgcagatccacacagcaaggtgttc
agtatgtttctagagactctggtagactttatcctggtgcacagagaggacctgcaggac
tggctgtttgtcctgctcacccagctactgaagaagatgggagctgacctgctggggtct
gtccaggccaaggttcagaaggctctggacatcaccagggagtcttttccgtttgatcag
cagtttaacatcctgatgagattcattgtggatcagacacagacacccaacctcaaggtg
aaggtagccatcctgaagtacatagagtcactgggaagacagatggatcctacagacttt
gtcaactccagtgaaacgcgactggctgtatctcgcatcattacgtggaccacagaaccc
aagagctctgacgtcaggaagacccttcataactgggtggtggaggagctatcaggcagg
tccggtactgcagccttactggaggggcacctggaagagaggtgtaagcaggcggcccag
gtggtgctgatttctctgtttgagctgaacaccccagagttcaccatgctgctgggagcc
ctgcccaagaccttccaggacggagccaccaagctgctccacaaccacctcaagaactcc
agcaacaccagcagcgtgagttctcccagcaacactattgggcggaccccaccccgccac
acccccagccggaccagccccctcacctctccgaccaactgctcccatggtgggctgtct
ccgagtcggttgtggggtggatgttggagtggcgatgggctgtctaagcacccccctccc
cctcatcctcctccgcctccctccaccccctctggccccgccctcagggtcctccgcaga
gcgtactctcccagtatgttggagtatgacacagagaacatgaactctgatgagatatac
agctccctgcgaggggtcacagaagccatccagagtttcagctatcgcagccaggaggac
ctcaacgaaccaagagggaagagggacgatactgtggggcgtgaaggtgtggcgtcctct
ccaggctcggatgcccgtttggggctggatgtggtggagggtgggcgtacggccttggat
aacaagacctccctcctcaacactccgtctccccgctccttctctgggccgcgggccagg
gagtttgccccctacggctatggggacaccatcacctcatcctacgacaagagtgcccta
aaggaggccgtgttcgacgatgacgtggaacagttcagagactgccgtcggcaggacggc
agtggtgagaacaagatggtgctgcctaagggctttgctccgggttcccaggaccactca
gaccttgtggcagatcttctgaaggagctgtccaatcacaacgagcgtgtggatgagcgt
aagggggccttggtggagctgctgaagatcacacgagaggacagcctggccgtgtgggac
gaacacttcaagaccatcctcctactgctcctggagacactgggggataaagaccacacc
atccgggccctggctctgcgggtactgaaggagatcctgagaaaccaaccggcccgcttc
aagaactatgctgaactcaccatcatgaagaccctggaggcacacaaagactcccacaag
gaggtggtgcgggcagcggaggaggctgcctccaccctagccggctccatccacccagag
cagtgtatcaaggtgctgtgtcccatcgtccagacggctgactaccccatcaacctggct
gccatcaagatgcagaccaaggtgatcgaacgcatcaccaaggagtccctccaccagctg
ctgcctgacattataccaggactactgcagggctatgacaacacggagagtagtgttcgc
aaggccagtgtgttctgtctggtggccatctactccgtgattggagaagagctcaaacca
cacctgcagctactcacaggcagcaagatgaagctgctgaacttgtacatcaagagggcc
cagacgaccaacagcaacagcagcagttcctcggatgtgtcctcacacagctag
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integrated database retrieval system
