Oncorhynchus masou masou (cherry salmon): 135519344
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Entry
135519344 CDS
T10723
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135519344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135519344
03110 Chaperones and folding catalysts [BR:
omm03110
]
135519344
03029 Mitochondrial biogenesis [BR:
omm03029
]
135519344
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135519344
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
135519344
Messenger RNA biogenesis [BR:
omm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
135519344
Chaperones and folding catalysts [BR:
omm03110
]
Heat shock proteins
HSP60 / Chaperonin
135519344
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
135519344
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135519344
Exosomal proteins of other body fluids (saliva and urine)
135519344
Exosomal proteins of breast cancer cells
135519344
Exosomal proteins of colorectal cancer cells
135519344
Exosomal proteins of bladder cancer cells
135519344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
Motif
Other DBs
NCBI-GeneID:
135519344
NCBI-ProteinID:
XP_064800596
LinkDB
All DBs
Position
29:complement(31573643..31582117)
Genome browser
AA seq
576 aa
AA seq
DB search
MLRLPTVMRQMRPVSRALAPHLTRAYAKDVKFGADARAMMLKGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDSISKGANPVEIRRGVMLAVETVINELKRMSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLYDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISSVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKAQLHDMAVATGGTVFGDEAVGIALEDIQAHDFGKVGEVSVTKDDTMLLKG
KGDTAAIEKRQAEIVEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINTDQKIGIDIIRRALRVPAMTIA
KNAGVEGSLVVEKILQAAGEIGYDAMEGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTELPKDEKEAGMPGGMGGMGGMGGMGGGMF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtctacccacagtgatgagacagatgaggccagtcagcagggccctggccccc
cacctcacccgggcttacgccaaggacgtcaagtttggagccgatgctcgggccatgatg
ctgaagggagtggatctgctggctgatgctgtcgctgtcaccatgggacccaagggtcgc
acagtcattatcgagcagagctggggcagccccaaggtgaccaaggacggcgtcactgta
gccaaggccatcgacctgaagtgcaagtaccagaacattggtgccaagctggtccaggac
gtggccaacaacacgaacgaagaagcgggagatggcaccaccactgccaccgtgctggcc
agagccatcgccaaggagggctttgacagcatcagtaaaggagctaaccctgtggagatc
cgccgtggtgtcatgctggctgtggagaccgtcatcaatgagctgaagaggatgtccaag
ccagtcaccacccctgaggagattgcccaggtggccaccatctctgctaatggagacgta
gagatcggcaccatcatctccaacgccatgaagaaagtgggccgcaagggagtcatcact
gtcaaggatggcaaaaccctttatgatgagcttgagatcattgaggggctgaagttcgac
cgcggatacatctccccttacttcatcaacacagccaaaggccagaagtgtgagttccag
gatgcctatgtgttgctgagtgagaagaaaatctcttctgtccagagcatcgtccctgcc
ctggaattggccaaccagcaccgcaaacctctggtcatcgtggccgaggatgtggacgga
gaggccctcagcaccctggtcctcaacaggctgaaggtgggactgcaagtggtggcagtc
aaggccccaggctttggagacaacaggaaggcccagctgcatgacatggccgttgccacc
gggggcactgtgtttggtgatgaggcggtgggcattgctctggaggacatccaggcccat
gactttggtaaggttggcgaggtgtctgtcaccaaggacgacaccatgctgctgaagggg
aagggagacactgcggccatcgagaagcgccaggcagaaatcgttgagcagctggagaac
accactagtgactatgagaaggagaagctcaacgagaggctggccaagctgtctgacgga
gtggctgtgctcaaggtaggaggaacgagtgatgtggaggtgaacgagaagaaggaccgt
gtgaccgatgccctgaatgccaccagggccgctgtggaggagggcattgtgcccggaggt
ggctgtgccctgctgcgctccatccctgccctggatgccctcgtgcccattaacactgac
cagaagattggaattgacatcatcagacgagccctgcgtgtgccagccatgaccattgcg
aagaacgctggtgtggagggctctctagtggtggagaagatccttcaggccgcaggggag
ataggatacgatgccatggagggagagtacgtcaacatggtagagaagggcatcatcgac
cccaccaaggtggtaagaacggcactgatggacgctgcaggtgtggcgtctctgctctcc
accgccgagtgtgtggtcacagaactgcccaaggatgaaaaggaggctggcatgccaggg
ggcatgggtggtatgggaggtatggggggcatgggaggtggcatgttctaa
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