KEGG   Oncorhynchus masou masou (cherry salmon): 135519538
Entry
135519538         CDS       T10723                                 
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
  KO
K06485  integrin alpha 6
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm04382  Cornified envelope formation
omm04510  Focal adhesion
omm04512  ECM-receptor interaction
omm04514  Cell adhesion molecule (CAM) interaction
omm04518  Integrin signaling
omm04810  Regulation of actin cytoskeleton
omm04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:omm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    135519538 (itga6a)
   04514 Cell adhesion molecule (CAM) interaction
    135519538 (itga6a)
   04518 Integrin signaling
    135519538 (itga6a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    135519538 (itga6a)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    135519538 (itga6a)
   04810 Regulation of actin cytoskeleton
    135519538 (itga6a)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    135519538 (itga6a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omm04147]
    135519538 (itga6a)
   04515 Cell adhesion molecules [BR:omm04515]
    135519538 (itga6a)
   04090 CD molecules [BR:omm04090]
    135519538 (itga6a)
Exosome [BR:omm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   135519538 (itga6a)
  Exosomal proteins of breast milk
   135519538 (itga6a)
Cell adhesion molecules [BR:omm04515]
 Integrins
  Integrin alpha subunits
   135519538 (itga6a)
CD molecules [BR:omm04090]
 Proteins
  135519538 (itga6a)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 135519538
NCBI-ProteinID: XP_064800839
LinkDB
Position
29:complement(38026330..38055440)
AA seq 1094 aa
MVLPIRYFPIHVALFCLLEWTPISAFNLDTLNVLRKDGEPGSLFGFSLAMHRQLIPSDKR
ILLIGAPRAKALANQRANITGGLYSCDVTTESDDCDRIDFDNEEDVRVENKENQWMGVTV
NSQGPGGKIVTCAHRYQRRLFVDTAQESRDITGRCYVLSQDLTIDTSSDEDGGNWKFCEG
RARGHERFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLLEKGFYDDGPY
EVGDENRLDPDLVPVPANSYLGFSLDSGFSITKGHGLTIVSGAPRANHCGAVVLLRKENE
ASARLSPEYILEGPGLASSFGYDVAVVDLNGDGWQDIVVGAPQFFMKEGDIGGAVYVYIN
QAGKWAKITPIRLNGTKDSMFGLAVENIGDINQDSYQDIAVGAPYADAGAGKVYIYHGSA
NGINTMPAQILEGKPNNIRLFGYSLAGNMDLDKNSYPDIAIGSLSDTVLVYRARPIISIK
KDVKITPKEIDFTKKTCGNSICLTVEACFTYKANPASYSPKLTIRYAFEAEADRRKQGLI
SRVLFLNKSRTDQDFQSTGFLDLRGQNKRACTKTKIRLQDNIRDKLRGIPIEVSVGIQGT
KRQKRHNALPHLVPILDNSQPSKVVTEVNFLKEGCGNDNICQSNLQLEYRFCSKEPNQEV
FPPLQMQNGLPVISLSDQKDIALEVTVKNRNGDDAHEAKLVGMFPNALSFSGFRSQKTTR
DKPVLCLANQNGSQTECELGNPFKRDSEVTFYIILSTAGISLNTTEIDIDLELQTTSTQE
RTGSLKARAKVVIEMLLSVAGVARPSQVYFGGDVQGESAIKTEEEIGSLIDYEFRIINLG
KPLKSFGTASLNIQWPKENVDGKWLLYLVKISTTGLEEIPCSPETEINSLKHIQESSTSR
KKREAGGKTSGGKISLVSDQRKHKILMCGNGYDSQCVVIKCPLLGLDSSAVISLRSRLWN
ATFLENYATLNYLDIIVKASISLDSPAKNMVLRNAETQVRVTVFPEKAVAQFGGVPWWII
LVAVLAGILMLALLVFLLWKCGFFKRSKHDDSVPRYHAVRIKKEACQFKDGKAKLDSFEK
KQWMTSWNENESYS
NT seq 3285 nt   +upstreamnt  +downstreamnt
atggttctcccaataagatattttccaattcatgtggcacttttttgtttgctagaatgg
actcccatatcagccttcaacctggataccttgaatgtactgaggaaagacggggaaccg
ggcagtttatttggattctctctagccatgcaccggcaacttattccttcagataagaga
atactgttgattggagcaccaagagccaaagctctggccaaccagagagccaacataacc
ggaggcctgtacagttgtgacgtcaccacagaatccgatgactgtgatcgcatcgatttt
gacaatgaagaggatgtgagagttgagaacaaggagaaccagtggatgggggtgacagtt
aacagccagggccccggagggaagattgtgacctgtgctcatcgctaccagagacgtctg
tttgtggacactgctcaggagtcccgtgacatcacaggccgttgctacgtcctgagtcag
gacctcactattgatacgtcctctgatgaagacggagggaactggaagttctgtgaggga
cgtgccagaggccatgagaggtttggctcatgccagcagggtctggctgccacgttcacc
aaggactaccattacgtggtgtttggagcgcctggcgcctacaactggaaaggcattgta
cgtgtagagcaaaagaacaacactttgttggaaaagggattttatgatgacggaccttat
gaagttggagatgagaaccgcttggatcctgacctggtgcctgtgcctgctaacagctac
ctaggattttcccttgattctggcttcagcatcaccaaggggcatggtctaactattgtg
tctggagcaccacgagccaatcactgtggggctgtggtcctgttgcgaaaagagaatgaa
gcgtcagcaagactctctccagagtacattctagaagggcctggactagcatcgtctttt
ggatatgatgtagctgtggtcgacctgaatggagatgggtggcaggatattgttgtggga
gcccctcagttcttcatgaaagaaggagacattggaggagctgtttatgtctacatcaac
caggcaggaaagtgggccaagatcaccccaatccgcctcaatggaaccaaagactcaatg
tttgggctggcagtggagaacatcggtgacatcaatcaggactcctatcaagacattgct
gttggagcgccctacgctgacgctggtgcaggaaaagtgtacatttaccatggttctgct
aatggaatcaacaccatgcctgcacagatccttgagggaaagcccaacaacatcagatta
tttggatattctctggctgggaacatggatttagataagaattcctatcctgatatagcc
attgggtcactctcagatacagtactcgtttacagggcaaggccaattattagtatcaag
aaggatgtcaaaattactccgaaggaaattgacttcacaaagaaaacctgtggcaacagt
atctgtttgaccgtggaagcatgcttcacctataaagcaaaccctgcatcctacagccca
aaactaactatccgctatgcatttgaggctgaagcagaccgcaggaagcaagggctgatc
tctagggtcctgtttctgaacaagtctcgcaccgaccaggacttccagtccaccggattt
ctggacctccggggacaaaacaaaagagcgtgtaccaagacaaaaatcagactgcaggat
aacatcagggacaagctgcgtggtattcccattgaggtgtcagtgggaatccagggtacc
aagcgtcagaagaggcataacgctctcccccatcttgtgcctattcttgacaactcccag
ccaagcaaggtcgtcactgaggttaacttcttaaaggaaggatgtggaaatgataatatt
tgccagagtaatttacaactggagtacagattctgctccaaagagcccaaccaagaggta
ttccctccattacagatgcagaatgggctaccagtgatctccctcagtgatcagaaggac
atagctctggaggtgacagtgaagaacagaaatggggatgatgcccatgaggctaagctg
gtggggatgttccctaatgctctctcattctccggctttcgctctcagaaaactacgagg
gataaaccggtgctttgtttagccaatcagaatggctcccagacagagtgtgaactggga
aatccattcaaaagagattcagaggttactttctacataatcttgagcactgctggtatc
tctctcaataccacagaaatcgacattgaccttgagcttcaaacgaccagtacacaggaa
agaacagggagtctgaaagcaagggcaaaagtagtgattgagatgttactttctgttgca
ggagttgcgagaccttcccaggtgtattttgggggcgatgtgcaaggagagagtgccatc
aagacagaagaggagattgggagtttgatcgattatgaatttaggataatcaatttgggt
aagccgttgaagtcctttggcacagcctcgttgaacattcagtggcccaaagagaatgtg
gatgggaagtggctgttatatctggttaagatcagcaccactggcctggaagagatcccc
tgctccccagaaactgagatcaactctctcaaacacattcaggagtctagcacatctagg
aaaaagcgtgaagctggaggcaaaacatctggaggcaaaatctctttggtatcagaccaa
agaaagcacaagattttgatgtgtggcaatggctatgactctcaatgtgtggtgatcaag
tgccctctactgggcttggacagtagtgcagtgatttctctaaggtcccgtctgtggaat
gctaccttccttgagaattacgcgactttgaactatcttgatataattgtgaaagcttcc
atcagccttgattctcctgcaaagaatatggtcctcaggaatgctgagactcaggtgaga
gtcacagtgtttccggagaaggcagtagctcagtttggtggagtcccatggtggatcatc
ctcgtggctgtcctggctggtattctgatgttggcgttgctagtgtttctactctggaag
tgtggatttttcaaacgctcaaaacatgatgacagtgttccaagataccatgccgtacgg
atcaagaaggaggcttgtcagtttaaagacggaaaagccaagctggattcctttgagaaa
aagcagtggatgacaagctggaatgagaacgagagctactcatga

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