Oncorhynchus masou masou (cherry salmon): 135519544
Help
Entry
135519544 CDS
T10723
Symbol
dync1i2a
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04145
Phagosome
omm04814
Motor proteins
omm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135519544 (dync1i2a)
09142 Cell motility
04814 Motor proteins
135519544 (dync1i2a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135519544 (dync1i2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135519544 (dync1i2a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135519544 (dync1i2a)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
135519544 (dync1i2a)
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
135519544 (dync1i2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WDR55
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
135519544
NCBI-ProteinID:
XP_064800849
LinkDB
All DBs
Position
29:complement(38188798..38210273)
Genome browser
AA seq
628 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEDERKKKEADSKKDAAPMDDSDLEKKRRETDA
LLQSMGITSADVPVVPPPMSPTCKSVGTPSEAGSQDSGDGAVGPRTLHWDSDPSTLQLHS
DSELRRGPLKMGMAKITHVDFPPKETVSYTKETQTPVMTQQKEEEEEEEEVAPPQQVLEA
QTEKPVQKEEEEAPPQELTEEEKLQILHSEQFITFFDHSTRIVERALSEHVDVFFDYSGR
EMEEKEGEIQAGAKLFLNRQFMDERWSKHRVVTCLDWSAQYPELLVASYNNNEEAPHEPD
GVALVWNMKYKKNTPEYVFHCQSAVMSAAFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPV
QRTPLSAAAHTHPVYCVNVLGTQNANNLISISTDGKMCSWSLDMLSQPQDSLELVLKQSK
AVAVTSMSFPLGDVNNFAVGSEDGSVYMACRHGSKAGISEMFEGHHGPITGIDCHTATGP
VDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLD
LWNLNNDTEVPTASTTVEGNPALNRVRWAHSGKEIAVGDSDGQILVYDVGEQIAVPRNDE
WTRFVRTLAEINENRDDAEELAAQRLSA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagcgagctaaaagcggaacttgaaaggaagaagcaacgcctggctcag
atcagggaggagaaaaaaaggaaggaagatgagcgcaaaaagaaagaggctgactcgaag
aaagatgcagccccaatggatgactccgacttggagaaaaagagacgtgagacagatgcc
cttctgcagagcatgggcatcacgtcagctgatgttcctgttgtccctcctcccatgtct
ccaacctgcaaatccgtgggcacaccaagcgaggcagggagccaagactcgggcgacggc
gccgtgggacccaggactctccactgggactctgacccgtccactcttcagcttcactct
gactctgagctgcggcggggacctctgaagatgggcatggccaagatcacccatgttgac
ttccctccaaaagagactgtgtcgtacaccaaggagacccagacacctgtgatgacccag
cagaaagaagaggaagaagaagaggaggaagttgctccaccacaacaagtgcttgaggcc
caaacagagaaacctgtccagaaagaggaggaggaagcacctccgcaagagctgaccgag
gaggagaagctgcagatcctccactctgagcagttcataaccttctttgaccacagcacc
cgcatcgtggagcgggccctgtctgaacatgtggacgtcttcttcgactacagtggtcgc
gagatggaggagaaggagggtgagatccaggcaggggccaagctgtttctgaacaggcag
tttatggacgagcgctggtccaagcaccgtgtggtcacctgtctggactggtccgctcag
tatcctgagctgctggttgcctcatacaacaacaacgaggaagccccccacgagccggac
ggagtggccctggtctggaacatgaagtacaagaagaacacgccggagtacgtcttccac
tgccagtctgcagtgatgtcggccgcctttgccaagttccaccctaacctggtggtggga
ggcacctactcagggcagatcgttctgtgggacaaccggagcaacaagaggacccctgta
cagaggacccccctgtcagccgcagcacacacgcacccagtgtattgtgtgaacgtgctg
ggcacccagaacgccaacaacctcatcagcatctctaccgacggcaagatgtgttcctgg
agcctggacatgctgtctcagccgcaggacagcctggagctggtgttgaagcagtcgaag
gccgtcgctgtcacctccatgtctttccccctcggggatgtcaacaactttgcggtgggg
agcgaggacggttccgtctacatggcgtgtcgtcatggaagtaaagcagggatcagtgag
atgtttgagggccaccacgggcctatcacagggatagactgtcacacagcgaccgggccc
gtcgacttctcccacctgtttgtcacctcctccttcgactggaccgtcaagctgtggagc
actaagaacaacaagccgctgtactcgttcgaggacaactcggattacgtctacgacgtc
atgtggtctcccactcacccggcgctgtttgcgtgtgtggatggagtgggccatcttgac
ctgtggaacctcaacaacgacactgaggttcctacagctagtaccacagtggaggggaac
ccagccctgaaccgcgtgcgatgggcccattccggcaaagagattgccgtgggagactct
gatggacagattctggtctatgatgttggagagcaaatcgctgttccacgcaacgacgag
tggacccgtttcgtccgaaccctggcggagatcaacgagaaccgggacgacgcagaggag
ctggccgctcagcgcctctctgcctga
DBGET
integrated database retrieval system
