Oncorhynchus masou masou (cherry salmon): 135519619
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Entry
135519619 CDS
T10723
Name
(RefSeq) TRAF family member-associated NF-kappa-B activator-like isoform X1
KO
K12650
TRAF family member-associated NF-kappa-B activator
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04140
Autophagy - animal
omm04621
NOD-like receptor signaling pathway
omm04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135519619
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
135519619
04622 RIG-I-like receptor signaling pathway
135519619
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Gene cluster
GFIT
Motif
Pfam:
TBD
MIP-T3_C
Golgin_A5
DUF4296
KxDL
Motif
Other DBs
NCBI-GeneID:
135519619
NCBI-ProteinID:
XP_064800930
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Position
29:complement(39640578..39660580)
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AA seq
425 aa
AA seq
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MNLEYWAKRVKKRRYLDINDGYYRTKQTFIVELGFLGVHSDEDHQRAHDCRVSNDRGAHG
MERNIGDQLNKAFEAYRQASIERDSAKRELQKTNEYYQRHTQKLQKQIEDQQQLISKLKV
QLIAATKQPSGEVKGEAVPRKQEEETLSPSNHRFDNPSSSFRKIHYLKGNMETAMIVSPS
PHTAPVNSFEKKYVFEAFQALQGKFQQIQTLTRRQKDHLKKIYKGNYMANEQQFSMPIQC
TDVTAEQAERPFPSALRPVVILQHPPTSLASRGASQGDRDLVDSLTRLSVKFPPSTDSEY
EFLNSAPEKHFDLSMPTERAAVNSFPAVIEESSMELAIPFLYPTSPSHPTSLSTSLSYES
VRGPLQPLWSPELCDAAAAQAVSAKPQQQINNSPDICAYCHAVVPQDHMKSHLFTHCQRE
SEASN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggaatactgggctaaacgcgtgaaaaaaaggaggtatttggacataaatgat
ggatattatcgaacaaaacaaacatttattgtggaactgggattcctgggagtgcattct
gatgaagatcatcaaagggcccatgactgccgtgtcagtaatgatcgtggagcgcacggc
atggagaggaatattggagaccagctcaacaaggcatttgaagcttaccgccaggcctct
atcgagcgagacagcgccaaacgggaactacagaagacgaatgaatattatcaacggcac
actcagaaacttcagaaacagatagaagaccagcagcagttgatttcaaaactcaaagtt
cagttgatagcagcaactaagcaaccttcaggagaggtgaaaggtgaggctgttcctagg
aaacaggaagaggaaaccctgtctccttccaaccatcgctttgacaacccaagcagctcc
ttccggaagattcattacttgaaagggaacatggaaactgcaatgattgtgtcaccttca
ccacacacagcacctgtaaacagttttgagaaaaaatatgtttttgaggcgtttcaagct
cttcaggggaaattccagcagatacagacattaacccggagacaaaaagatcacctgaaa
aaaatctacaaaggaaattacatggcaaatgagcagcagttctccatgcccattcagtgt
acagacgtgactgcggagcaggcggagaggcccttcccctcagccttaaggccagtggtc
atcctccagcacccgcccacgtccctggcatcccgtggtgccagccaaggggacagagac
ctagtggactccctcaccagactcagcgtcaagttccccccctccacagacagtgaatac
gagttcctgaacagcgctccagagaaacactttgacctgtctatgccaacggaacgggca
gcagtcaacagtttccctgccgtcatagaggaatcgtctatggagctggccatcccattc
ctgtatcctacgtctccctctcaccccacctccctctccacctcactctcatacgagagt
gtgcgtggacccctgcagcctctgtggagccctgagctttgtgatgcagcagcagcacag
gccgtgagtgcgaagccacaacaacagatcaacaacagccctgatatctgtgcctactgc
catgcggtagttccccaagaccatatgaaaagccaccttttcactcattgccagagggag
agtgaagccagcaattga
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