Oncorhynchus masou masou (cherry salmon): 135519823
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Entry
135519823 CDS
T10723
Symbol
tnxba
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135519823 (tnxba)
04518 Integrin signaling
135519823 (tnxba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135519823 (tnxba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
omm00536
]
135519823 (tnxba)
Glycosaminoglycan binding proteins [BR:
omm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135519823 (tnxba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
EGF_TEN
EGF_Teneurin
FN3_Tor_3rd
Fn3_Dep-1_2nd
Fn3_PBP1
EGF_2
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
135519823
NCBI-ProteinID:
XP_064801106
LinkDB
All DBs
Position
29:complement(88774543..88801548)
Genome browser
AA seq
1651 aa
AA seq
DB search
MLFSLALLFLLTPFPSLQTPVTNEKRNATGTGSEPKPYVLLTLSLAKPKTTATLVKVTKE
TPKPTLKALNPNAANQTHPASSSPLKPPTATLVKLTKETPKSTLKALNPTAANQTHPAPS
SPLKPPTATLIKLTKETPKPTLKALNPTAANQTHPAPSSPLKPPTATLVKLSKETPKSTL
KALNPTAANQTHPAPSSPLKPQQPLKLTKETPKHIQPPQAPSNLQQPPIKLTKETPKPTL
KALNPTAANQTHPAPSSPLKPPTATLVKLTKETPTPSLKALNPTAFNQTHPAPSSPLQPP
TATFIKLTKETPKPTVKALSPTAANQTHPAPSSPLKPPTATLVKLTKETPKPSLKALKPT
AFNETHPAPSSPIKPPTATFIKLTKETPKPTVKALSPTAANQTHPAPSTPLKPPTATLVK
LTKETPKPTLKTLSPAAANQTHPAPLTPLKPPTATFIKLTKETPKPTVKALSPTAATQTH
PAPSTPIKPPTAMFIKLNKETPKPTVKALSPTAANQTHPAPSTPLKPPTAMFIKLNKETP
KPTVKTLSPTAANQTHPAPSTPLKPLTASGPKITTKDKPSITLPHPIPIKVLITSDSGCI
GKDTQSDASNRNKEQTQTHELKLKPGFPLTLTHRISLAPTSCTGGCVAEMAALKGRVGRL
EKEMSLMKSKCASCSKGPCPNDCSAKGKCEKGKCVCLPGFLGLDCSKCTAGADCSKKGTK
DNIQITVQSVALKVSPESNAITESLQGKKTKADQVLFQKKTVQNKPTAAKEDGDIKSKTK
GTTSVKAGLTKTQAKQGVTVTKTKTTHSNATKTGLGRPTVGQVLLKHHGGRKQESKGRTT
VIKKQSKPDLKLKGTVKEESAGKANAEAGNLQDQPQANVTQSTVKTFVNKTRSGKETLEQ
STLAEKNVTLTSEKKTVKKVKLVQGTMNVTKVSLAFDITKAGTGKITLTKDIKTEADISS
GTSKTTVKTGSGKGKPVPRKSQYVVNMTTVETTSEVKVFSNKTTTIQSSKNSTRKAGTGV
GRGLGSVKVQNITTYGFTLTWSAPTAMFKNFTVSRREHRAEGEEEEEEEAEEGAALGYED
RVAGVINSTIEIRKQSPNGTVAFPTKAPGSSRGKAHTKRVSVVLPGSVRSVEFSNLRPQT
RYSLHICGTTPGSRSKIHRVTTMTGPEPPTELVFSNVTEASLSVSWSKPKNNISGFKITY
SHSVTGESGSVSVDSLQSQVSLSKLSSGATYEVSVMSTMGKRESDPLIAIMTTVPAPPTV
LQATNVTDTKAVLQWTPAMGQVDRFIISYESAKTPNVTVTVMVSGNSVEQQLRGLQRDTL
YTVKALSQKDSLQSTAITTTFTTASAVKAGEVGARSAVVSWKSPSVAFSRYRVTYQTAGE
EVKEVILDSTVTEYKLTGLFSMSKYTVLVQGEREGQYTSIVTTEFITGKLRFPFPTECSQ
ELLNGALQSGEVDLYPEGKEGKAVRVYCDMETEGGGWTVFQRRMNGKTDFFRTWSDYTTG
FGNLSEEFWLGNELLHNLTSMGPVSLRVDLRSGNETTYAHYSSFTIDSVDKHYAIEVSGY
TGTAGDSMRYHNGRPFSTRDKEPLPLGIHCARAYMGGWWYKNCYKTNLNGLYGTNRNNQG
VVWIDWKGKDSSIPFTEMKFRSAGISITTHG
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgctgttttctctagccctcctcttcctgctaaccccgttcccctcccttcaaactcca
gtaaccaatgagaaaagaaacgccacaggaacaggaagtgaaccgaaaccctacgtccta
ctcaccctctccctcgcaaaaccaaaaaccacagccacgctcgtgaaagtcaccaaagag
acccctaagcccactctgaaagccctaaacccaaatgcagccaatcagacacatccagcc
tcctcaagccccctcaaacctccaacagccacgctcgtcaaactcaccaaagagacccct
aagtccactctgaaagccctaaacccaactgcagccaatcagacacatccagccccctca
agccccctcaaacctccaacagccacgctcatcaaactcaccaaagagacccctaagccc
actctgaaagccctaaacccaactgcagccaatcagacacacccggccccctcaagcccc
ctcaaacctccaacagccacgctcgtcaaactctccaaagagacccctaagtccactctg
aaagccctaaacccaactgcagccaatcagacacatccagccccctcaagccccctcaaa
cctcaacagccactcaaactcaccaaagagacccctaaacacatccagccccctcaagcc
ccctcaaacctccaacagccaccaatcaaactcaccaaagagacccctaagcccactctg
aaagccctaaacccaactgcagccaatcagacacatccagccccctcaagccccctcaaa
cctccaacagccacgctcgtcaaactcaccaaagagacccctacgccctctctgaaagcc
ctaaacccaactgcattcaatcagacacatccagccccctcaagccccctccaacctcca
acagccacgtttatcaaactcaccaaagagacccctaagcccactgtgaaagccctaagc
ccaactgcagccaatcaaacacatccagccccctcaagccccctcaaacctccaacagcc
acgctcgtcaaactcaccaaagagacccctaagccctctctgaaagccctaaagccaact
gcattcaatgagacacatccagccccctcaagccccatcaaacctccaacagccacgttt
atcaaactcaccaaagagacacctaagcccactgtgaaagccctaagcccaactgcagcc
aatcagacacatccagccccctctacccccctcaaacctccaacagccacgctcgtcaaa
ctcaccaaagagacccctaagcccactctgaaaaccctaagcccagctgcagcgaatcag
acacatccagcccccttgacccccctcaagcctccaacagccacgttcatcaaactcacc
aaagagacccctaagcccactgtgaaagccctaagcccaactgcagccactcagacacat
ccagccccctctacccccatcaaacctccaacagccatgttcatcaaactcaacaaagag
acccctaagcccactgtgaaagccttaagcccaactgcagccaatcagacacatccagcc
ccctctacccccctcaaacctccaacagccatgttcatcaaactcaacaaagagacccct
aagcccactgtgaaaaccctaagcccaactgcagccaatcagacacatccagccccttca
acccctctcaagcctctcacagccagtggtccaaagatcacaaccaaagacaaaccctcc
atcacactgccgcatcccatccccatcaaggtgctcatcacttctgactctggctgcatc
ggtaaggacacccagagcgacgctagcaaccgcaacaaggagcagacccagacccatgag
ctgaagctgaagcctggctttcctctaaccctgacccaccgcatcagtctggctcctacc
tcctgcaccgggggatgtgtggctgagatggcagcactgaaagggcgtgttggcaggctg
gagaaagagatgtccctcatgaagagtaaatgtgcttcctgctccaaaggcccatgtccc
aatgactgcagtgcgaaagggaaatgtgagaagggaaagtgtgtctgcctcccagggttc
cttggtctcgactgcagtaaatgtacagctggagctgactgcagtaaaaaaggtaccaaa
gacaacatccagataacggtgcagtcggtggcgttgaaggtatcacctgagagcaatgct
atcacagagagtctgcaggggaagaagaccaaggctgaccaagtcctcttccagaagaaa
acagtgcaaaacaaacccacagccgccaaagaggatggtgacatcaaaagcaaaacaaaa
gggaccacaagtgtaaaagcagggctcaccaagacacaagccaaacaaggggttactgtc
actaaaaccaaaaccacccattccaatgctaccaagactggactgggccgaccaaccgtc
ggacaggttctgttgaaacaccatggaggaagaaagcaagagagcaaaggcagaacgaca
gttataaagaagcagtctaaacctgacctgaagttgaaaggaacagtaaaggaggaatct
gcaggtaaagccaatgctgaagctggcaacctccaagaccagcctcaagccaatgtcacc
caaagcactgtgaagacgtttgtgaacaaaacccggtcaggaaaagagactctggagcag
tcgacgttggctgagaagaatgtgactctaacatctgaaaagaaaacagtcaaaaaggtg
aaattagttcaggggactatgaacgttacgaaggtgtcattggcttttgatatcactaag
gctgggacaggcaagatcacccttacaaaggacattaagacagaggcagacatctcctca
ggcacatctaaaactactgtgaagacagggtcaggcaaagggaagccagtcccacggaag
agtcagtatgttgtgaacatgaccactgtggagaccacctctgaagtcaaagtcttcagc
aacaagacaacaactatccagtcttccaaaaatagcaccaggaaagcaggaacaggagtg
ggccgtggacttggctctgtgaaggttcagaacatcaccacgtacggcttcaccctcaca
tggtcggccccaacagccatgtttaagaacttcactgtgtccagaagagagcacagggca
gagggtgaggaagaggaggaggaagaggcggaggagggagctgctctcgggtatgaggac
agagtagccggagtcataaactctaccattgagatccgaaaacagagccctaatggaact
gtggctttccccactaaagctcccggtagctccagaggtaaagctcacacaaagagggtg
tccgttgttctccctggcagcgttcgctctgtggagttcagtaacctgcgacctcagacc
cgatactccctgcacatatgtggcaccactcccggatcccgctccaagattcacagagta
accaccatgacaggacctgagccacccaccgagctggtgtttagtaacgtgacagaagcc
tctctttctgtgtcctggtccaaaccaaagaacaacatctccggcttcaaaatcacatac
tctcactcagtcacgggagagagtggttctgtgtctgtggattccctgcagtcccaggtg
tctctgtccaagctgtcctcgggggccacgtacgaggtcagtgtgatgtccaccatgggg
aagagagagagtgatcccctcattgccatcatgaccacagtacctgcccctccaactgtt
ctccaagcaactaacgtaacagataccaaggcagtgctgcaatggacccccgccatgggc
caagtagaccgcttcatcatcagttatgagtctgcaaaaactcccaatgtaacagtgaca
gtgatggtgtctggtaactcagtagagcagcagctgagagggctgcagagagacaccctg
tacacagtcaaagccctgagtcagaaagacagtctgcagagcacagccatcactaccacc
ttcacaacggccagtgctgtaaaggccggtgaggtgggcgctcgctctgctgttgtatca
tggaaatcccccagtgttgcgttcagcagatacagagtgacctatcagacggcaggagag
gaggtcaaggaggtgattctggactccacggtgacggagtacaagctgactggactgttc
tctatgtctaagtacacagtgctggtacagggagagagagaggggcagtacacatctatt
gtcaccactgagtttatcacaggaaaactgcgcttcccattccccacggagtgttcccag
gagctgctgaacggagcgctccagtcaggagaggtggatctttacccagagggcaaggaa
gggaaggcagtcagagtctactgtgacatggagactgagggaggaggctggacggtgttc
cagaggagaatgaacgggaagacagatttcttcagaacctggagtgactacactaccggc
tttggaaacctcagcgaggagttctggctcggtaatgagctgcttcacaacctgaccagc
atgggcccagtgagcctgagagtggacctgcgttcaggcaacgagacgacctacgcccat
tactccagcttcaccatcgactcagtggacaaacactacgccatcgaggtgtctggatac
accggcactgcaggtgactccatgaggtaccacaacgggcgcccattttccaccagagac
aaggaacccctccccctgggcatccactgtgccagggcctacatgggcggctggtggtac
aaaaactgctacaagaccaacctcaacggcctctatggcaccaacaggaacaaccagggt
gtggtgtggatagactggaagggcaaagactcgtccatcccctttactgagatgaagttc
cgatcggccgggatctccatcacaacccacggataa
DBGET
integrated database retrieval system
