Oncorhynchus masou masou (cherry salmon): 135519948
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Entry
135519948 CDS
T10723
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135519948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135519948
03021 Transcription machinery [BR:
omm03021
]
135519948
03036 Chromosome and associated proteins [BR:
omm03036
]
135519948
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
ARID
135519948
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135519948
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135519948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
135519948
NCBI-ProteinID:
XP_064801262
LinkDB
All DBs
Position
29:50623762..50664820
Genome browser
AA seq
2346 aa
AA seq
DB search
MAAQVASAATLNTSPPSELKKPDRDPHEDSILGEKQQENKQPGLERGSPVRGDLQDGADV
GNAGGGGEPEMKNGNGNPSRTNNNQNDSIGSEGNNHPGMVHHHGSGFPPPSYGYSQHYGR
APFHQHGGQQSPGMAAAAGPAVPSSNMMDPYQPNSHDHGFSNHQFNNYNPFPNRTPYSGQ
GYGMNPSRNTQAPAAGGQPANVKQQPAGGPTAMAASYNNQRYNMGNPQPTSTPTLNQLLT
SPSSTRIYPNYPSSEYSNQEGASKGPTDTGSSGQYGGGNPGWQQRTHHPPPMSPGSTGQP
LGRSQPPGAMDPMAKLRGQPYGGGSPYSQQPGQGPPPGAQQGHAYPGQGYGPLGSQRYPV
VMQGRTPGAMGGMQYGQQMPSYGQQGPGGYGPQGQGPYYGQQGQALHPGQQQGPYPQAPL
GQQGGQTPYPQQSHPPQTSASHAQGGPPYPQPHMPPQSQGPQPVPSQGPPQSQPPYSQVP
AQAQSGQPPYPQQQGPPSQPPQQASSQVPAGSQPQLSYPPTQGPQQLPTQQQQQPQTPSQ
PPHQPPGHSQHPQGQPASYSQNPPQQQQSPYQRFPPPPQQEISQDSFSSQSSAPPSNQPK
SVSEDVSMQGQPSSLPVSPHPTCAKDLSGSIDDLPTGTDGALSPGVSTSGVSSSQGEQSN
MTQSPFSPHTSPHLPGIRGPSPSPAGSPASATTSRTGPLSPATIPGTQMPPRPSSVQSDG
SLHAAMSQSPMAQERGFVQRNPQMPPYGSPQSASPLSPRQSSGGQMHPGMGPYQQQNNSM
GGYGPQGGQYGPQGYPRQPGYNNMPNANYPGPGMGNPMNPGPGMGNPINPMSGQGGLPYA
GIPPGRMPAGQMGVRPYGPNMGPNMPPNMSNMPPQVGSGMCPPPGLNRKAQEAAAVVMQH
AATNSIHSRMPGYPNMSPGMMGSGAPYGPPMNNMPGMMNTQGGPPFPMGPNMANNSSGLA
PSPEFGMDGKMNQGQKMNNKVDGTPKAEPTKSKKSSSSTTTNEKITRLYELGPELERKMW
VDRYLGFIEEKAMGMTNLPAVGRKPLDLFRLYVSVKEIGGFAQVSVNKNKKWRELSTNLN
VGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPEIITDNKKANQAKVQPPSPAGSGSLQ
GPQTPQSTSSSMAEGSDLKPPTPASTPHPTQMPPGARSNVALQDPFADSSDPAFPRRNSM
TPNSGYQSGMSTPEMPGRMGPGPYEGPGPNKDPFGAMRKVGEQFLPASQGPNSGMAEQQQ
FNRVPPPGAMSMAQRQQYGPGPYGQGYERRPEQGMGPEGSMGSGAPQPNLMPVNSDTGMY
SPNRYPPQQQPRNDSYGNQYPGHGTPPGGSYPNQQPGMYPQQQQVMALTHCNYKRPVEGG
YPPAKRHEGEMYSAPFSAGLQQQQQQQQQPGVASAPPAGQPEMYQPQYSSGSFTGTDRRL
PGPQGQFPFPFNRERMQAATGPNAQPSMPPQIMQPSPDGPPGGVWQGRGEMNYPGNYPNR
QGGPPGGPAQGPGHPGMNRGSEEMSLEQRMNHEGQWGPGQMGPRQPPYGPGGTGLPMTRT
LQSNYQSAQAMQNHIPQVSSPSPMPRGGPMESRTSPSKSPYMHSGIKMQKAGPPVPASHI
VPQSVQSPLIRRDMPFPPGSVEATHPILKPRRCLTTKDIGTPEAWRVMMSLKSGLLAEST
WALDTINILLYDDNSISTFNLNSLPGLLELVVEYFRRCLIEIFGILREYEVGDPGQRTLL
DPDALKRDWSCMEDEEPGVEDMKVEGEDEEEDDDDEEEKEEVVVQRSKQPAGTTIDGQAQ
VKQEDEQESCSEWDTLKEKDAEDKEKSCSTFEQPSSSSDPPGLGPATPQERPKQASKFDK
LPLKMVRKKDPFPAGRATQRGKVQEFDSGLLHWSAGGGDSTEHIQTHFERREEFLVPRER
VLVVPTAKRKRPEAEKVGDKDNATPTEKYKQKGERDQRPSQPSSTEKASTTTDGKEGKSE
HSDAETEEMSQSEEPQSQQEHDKSSGPTRQQVPQRVVEDEPHSKDEGPLVTLANWQDALA
RRCVCVSNIVRSLSFVPGNDQEMSKHPGLMLLLGRLVLLHHRHPERKQAPLTYEKEEESD
DCLGQRDEWWWDCLSLLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPSAEA
QDPFPTLGPHSAMSPQRLVLETLSKLSIQDNNVDLVLATPPLGRLEKLYGTLVRLVGERK
VAVCREMSVVLLANLAQGDSMAARAIAVQKGSVGNLLGFLEDSLAATQLQQSQSSLLHLQ
GMHFEPTSNDMMRRAARALHALAKVEENHSEFTLYESRLLDLSVSPLMNSVVSHVICDVL
FLIGQS
NT seq
7041 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgccgccactctcaacacaagcccgccttccgaactaaag
aaaccggatcgagacccacatgaggattctatactgggggaaaagcagcaggaaaacaag
cagccgggattagagcgcgggtctccggtccggggggatctgcaggacggggccgatgtt
ggaaatgcagggggaggaggggaacctgagatgaagaacgggaacgggaacccttccagg
actaataataatcagaatgattccatcggatccgaggggaataaccatcccgggatggta
caccaccatgggtctggttttcctccaccttcttatggatacagtcaacactacggccgg
gccccttttcatcaacatggcggacaacaaagccctggcatggcagctgctgcaggtcca
gccgtgccgtcgagtaatatgatggacccatatcaacccaattcgcacgaccatggcttt
tctaaccaccagtttaacaattacaatccattcccgaacagaactccctattctggccaa
ggatacggcatgaacccctcacgtaatacacaggctccggcagctgggggacagccagct
aacgttaagcagcaaccagcaggaggacccacagcaatggctgcatcttacaacaaccag
agatataatatggggaatccacagccaacgtctaccccaaccctcaaccagctcctaacc
tctccaagctccactcgtatatatccaaattacccatctagtgaatatagtaatcaggaa
ggcgctagtaagggaccaacagacacgggcagtagcggtcaatatggaggggggaatccg
ggttggcaacaaaggacccatcatccgccgcctatgagccctggaagtacagggcaaccc
ctaggtagaagccagcccccaggtgcaatggatccgatggctaagttgagaggccagccg
tacggagggggcagtccatactcccaacaacctggacaggggccacccccaggagcccag
cagggtcacgcatacccgggccaaggctacggtcccctcggctcccagagatacccggtg
gtcatgcagggccgcacccctggggctatggggggcatgcagtacgggcagcagatgccg
tcttatgggcagcagggaccaggaggctatgggcctcagggccaagggccctactacggc
caacagggccaggctttacacccaggccagcagcaagggccctacccccaggcacctctg
ggacagcagggtggtcagacaccctaccctcagcagtcccaccctccccagacgtcagcc
tcacatgcccagggtgggccgccctatccgcagccccacatgcccccccagtcccagggc
ccgcagccagttccatcccaagggcccccgcagtctcagccgccctactcccaggtccca
gcccaggctcagtctggtcagcctccttacccccagcagcaggggcctcccagccagcct
ccacagcaggccagctcccaggtcccagcagggtcacagccccagctcagctatccaccc
acgcagggcccacagcagctccccacacagcagcagcagcaaccccagacaccctctcaa
ccccctcatcaaccaccaggtcacagccagcatccacagggccagcctgcatcctactcc
cagaatcctccacagcaacagcagtcaccttaccaacgcttccctcctccaccacagcag
gagatatcccaggactcgttcagttcccagtctagcgcccctccctccaaccagcccaaa
agtgtctcggaggacgtcagcatgcaaggccagccgtccagcctaccggtgagtcctcac
ccaacctgtgcaaaggatctctcaggctccatcgatgacctgcccacgggcacggatggc
gctctgagtcctggcgtgagcacttcaggtgtatcaagcagccagggcgagcagagcaac
atgacccagtcgcccttctctccccacacgtctccccacctgccaggcatccgagggccc
tcgccgtcacccgccggctcccccgccagtgccaccacctcccgcacggggcccctctca
cccgccacaataccagggacccagatgccccctagaccatcgagtgtgcagtctgacggg
agtctgcacgccgccatgagccagtctcccatggcccaggagagagggttcgtacagaga
aacccccagatgcccccatacggttcaccacagtctgcctctcccctatcaccccgacag
tcctctggaggccagatgcaccctgggatgggaccttatcagcagcaaaacaactccatg
gggggctatggacctcagggtgggcagtatggcccacaaggttacccccggcaacctgga
tacaacaacatgcccaatgccaactaccctggccctggcatgggcaaccccatgaaccct
ggccctggcatgggcaaccccataaaccccatgtctgggcaaggggggctgccgtacgca
ggcatcccccctggtagaatgcctgcgggccagatgggagtgcgtccctatggccctaac
atggggcccaacatgccacccaatatgagtaacatgccacctcaggtgggctcagggatg
tgccctccccccggcctcaaccggaaggcccaggaggctgcagctgtagtcatgcaacac
gctgctaccaactccatacacagcaggatgcctggctaccccaacatgtcccctggcatg
atgggctctggcgccccctatggccctcccatgaacaacatgcctggcatgatgaacacg
cagggcggcccacctttccctatgggacccaacatggccaataactccagtggtttggcc
cccagtccagagtttggtatggatgggaaaatgaaccagggccagaagatgaacaacaaa
gtggacggaacaccgaaagcagaaccgactaaatccaagaagtcaagctcttccacgacg
accaacgagaagatcacgcgtctgtatgagctgggccccgagctggagaggaagatgtgg
gtggaccgctatctgggctttatcgaggagaaagccatgggcatgaccaatctgcctgct
gttggccgcaagcccctagacctcttcagactctacgtctcggtcaaggagattggaggc
ttcgcacaggtcagtgtgaacaagaacaagaagtggcgggagctgtccaccaacctgaat
gttggcacgtcgagcagcgctgccagctccctgaagaagcaatacatccagtgtctgtac
gccttcgagtgcaagatcgaacgcggggaggacccccctcctgagatcatcactgacaac
aagaaggccaaccaggccaaggtccagccaccctccccagctgggtcaggttctctccag
ggccctcagaccccccagtccaccagcagctccatggccgagggcagcgacctcaagccc
cccacacccgcctccaccccacaccccacccagatgccacccggggccaggagcaatgtg
gcgctgcaggacccatttgctgacagtagtgaccctgctttccccagaaggaactccatg
acccctaactctggctaccagtctggcatgagcaccccagagatgccaggtcgcatgggt
ccagggccctacgagggtccagggcctaacaaagacccctttggtgccatgcggaaagtt
ggggagcagttcttgcctgccagtcagggtcctaacagtgggatggcagaacagcaacag
tttaaccgtgtgcctcctccaggtgctatgtcgatggctcagagacaacagtacggacca
ggaccttacggacaaggctacgaaaggaggccagagcaggggatgggcccagagggcagc
atgggatctggtgctccgcagccaaacctgatgcctgtcaactccgacacggggatgtac
tcgccaaaccgctacccaccacagcagcagccacggaatgattcctatggtaatcaatat
cctggccatggtactccccctggtggttcctatcccaatcaacagccaggaatgtaccca
cagcaacaacaggtgatggctctaacccactgtaactacaagcgtcccgtggaagggggc
tacccaccagcgaagcgtcacgagggggagatgtacagtgcccccttcagtgcagggctg
cagcagcagcaacaacagcagcagcagccaggggtggcctctgcaccccctgctggccag
ccagagatgtaccaaccccaatacagcagcggctccttcaccggcactgaccgccgcctg
cctggtccccagggccagttccccttccccttcaacagagagcgcatgcaggccgccacg
gggcccaacgcccagccctccatgccccctcagattatgcagccaagccctgacggaccc
cctggtggcgtgtggcagggccgcggggagatgaactatcccggcaactaccccaaccgg
cagggtggccccccagggggcccagcccagggacctggtcatcccggaatgaaccgcggt
tcggaggaaatgtcattagagcagcgcatgaaccacgagggccaatgggggccaggtcag
atgggtcctcggcagcccccctacggccctggagggacgggcctgcccatgacccgcacc
ctacagtccaactaccaatccgctcaggccatgcagaaccatattccacaggtgtccagt
ccctcccccatgccccgcgggggccccatggagagccggacgtcgcccagtaaatctccc
tacatgcacagtggcatcaagatgcaaaaggcagggcccccggttcctgcctctcacata
gtgccccagtctgtgcagtcccctctgatccgtagagacatgccctttcccccaggctca
gtggaggccacccaccccatcctaaaaccacgccgatgcctcacaacgaaagatattggg
accccagaggcttggagggtgatgatgtccctaaagtctggcctgttggctgagagcacg
tgggccctcgacaccatcaacatcctcctgtatgacgacaacagcatctccaccttcaac
ctcaattcgctgcctggcctgctggagctggtggtggagtacttccggcgctgccttatc
gagatctttgggatcttgcgcgagtacgaggtgggcgatcccggccagaggactctactg
gaccctgacgccctgaaaagagactggagctgcatggaagatgaggaaccaggggtggag
gacatgaaggtagaaggagaggatgaggaggaggatgatgatgatgaggaggagaaagaa
gaggtggtggtgcagcgttcaaaacagccggccgggacaacaattgatggacaggctcag
gtgaagcaagaggatgagcaggagtcgtgctcagaatgggacactctgaaagagaaggat
gctgaagataaggagaagagctgctctacctttgagcagcccagctcttcatcagacccc
cctggcctgggcccggctaccccccaggagagacccaaacaggctagcaagttcgacaag
ctccccctgaagatggtacggaagaaggacccgtttccagcaggcagggcaacccaaaga
ggaaaagtgcaggagtttgacagtgggctgctccactggagtgccggcggcggagacagc
acggaacacatccagacccactttgagaggagggaggaattcctggtcccacgagaacga
gtgctggtcgtccccacagccaagaggaaaaggccagaagcagagaaggtgggggacaag
gacaatgctacccccacagagaaatacaaacagaagggggaaagggatcagaggccctcc
cagccatcatccacagaaaaggcctcaacaacaaccgacggtaaggaggggaagtccgag
cactcggacgctgagacagaggaaatgtcacagtccgaagagccccagagccagcaggag
cacgacaaatcgagcggacccactcgtcagcaagtcccccagcgtgtggtggaggacgag
cctcacagcaaggacgagggcccactggttacactggccaactggcaggatgctctggcc
cgccgctgtgtctgcgtctccaacatcgtgcgcagcctctccttcgtgcctggcaacgac
caggagatgtccaaacaccctggcctcatgctgctgctgggtcgcctagtgctgctgcac
caccgccaccctgagaggaaacaggccccgctcacctacgagaaggaggaggagtctgat
gactgtcttggccagagggacgaatggtggtgggactgcctgtcgctgttgagggagaac
tgcctggtcactctggccaacatctctggccagctggacctctccatctaccccgagagc
atctgccttcctctgctggacggcctcctccactgggctgtgtgcccctcggctgaggcc
caggaccccttccccacgttggggccacacagtgcaatgtccccccagagactggtcttg
gagaccctcagcaagttgagcatccaagacaacaatgtggacctggtcctggccacgccg
ccgttgggtcgtttagagaagctgtatgggaccttggtgcggctggttggggagagaaag
gtggccgtctgcagggagatgtcggtggtgttgttggccaacctggcccagggagacagc
atggcagcgcgcgccattgctgtgcagaagggaagcgtgggaaacctcctgggcttcttg
gaggacagcctggcggccacccagctacagcagagccagagctctctgctgcacctgcag
gggatgcacttcgagcccaccagtaatgacatgatgcggcgggcggcccgggccctgcac
gccttggccaaggtggaggagaaccactcagagttcacactctacgagtcacgcctcctc
gacctctccgtgtcacctctcatgaactctgtggtgtctcacgtcatctgcgatgtactc
tttctgattggccagtcatga
DBGET
integrated database retrieval system
