Oncorhynchus masou masou (cherry salmon): 135519973
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Entry
135519973 CDS
T10723
Name
(RefSeq) polycomb protein SCMH1-like isoform X1
KO
K11461
polycomb protein SCMH1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135519973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135519973
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
135519973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
Motif
Other DBs
NCBI-GeneID:
135519973
NCBI-ProteinID:
XP_064801314
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Position
29:complement(52337425..52380887)
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AA seq
785 aa
AA seq
DB search
MRKPVPQKAIEWKDGRQIKHARSGRPSQVPSQYQGGHFSWDKYLKETGASAAPAHCFRQG
ATPPVNEFKAGMKLEAQDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVDSSEI
QPIGNCEKNAGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPARIFHKQEPPAPEQNSFQV
GMKLEAVDRKNPHFICPATVGALRGVEVLVTFDGWRGAFDYYCRYDSRDIFPVGWCSLTG
DNLQPPGTKGLCAPVCIYAVLPKTLGCLSDGSEGRAMHPVPGQPPGQRGRKPGRRKAKLT
ELWGQKGAGVGTQAPLPRNGLEHIKVPKKRGPKPGSKVQTKDPGLGRLGWAKRAGWLEGA
MAGPGQPMSRPRGRLPANWAQRMALQEGQVESIKIPKKRGPKPGSKRKPRVVPNPVPVSP
NSSMPEPDTSTVPLDNATIPSAALHAATVCVYLNKYGKVGPHLDGRRVQQLPDHFGPGRA
SSVLQQCVQACVDCAHNQSSVFSCLKPGHGGEVISAHFDQQHHTLTLPTVNSVTYVLRFL
EKLCHNLYCDPLFGSQPVPQGGLHYESHAYPERRSFREGLTTGPGRGSKRFLQDSYYSPL
PHKLAKNLCLSSEGEPFLMVNGVGGSGHLKKSPLSPGSTGQPLGLRSPTKLLHLNSSGSE
RFRESPRPSGQDPNLWTVKDVMQFIRDIDPLLAPHADLFRKHNLPQVDSNQVVETSRKIN
GNRMHLSSISSLKAKGLNTYVNKEIDGKALLLLRSDMMMKYMGLKLGPALKLTFHIDKLK
HGRPN
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagccagtgccacaaaaagctattgagtggaaagatggcaggcagatcaagcat
gcccgaagtggccgtccctcccaggtcccatctcagtaccaaggaggtcacttcagttgg
gacaaatacctgaaggaaacaggtgctagtgctgctcctgcgcactgcttcagacagggc
gcaacacctccagtgaatgagttcaaggcgggcatgaagctggaggcgcaggaccctcgg
aatacaacgtccacctgcattgctacagtggtgggcctgactggatcgcggctgcgcctg
cgcctcgatggctccgacaacaagaacgacttctggcgcctggtggactcatcggagatc
cagcctatcggcaactgcgagaagaacgcaggaatgttgcagccgccattgggcttccgt
ctgaacgcatcctcctggcccatgttccttctaaaaacactcaacggagccgaaatggcc
ccagcacgcatctttcacaagcaggagcccccagccccagagcagaactccttccaggtg
ggcatgaagctggaggcggtggaccgcaagaacccccacttcatctgtccggccacagtg
ggggcgctgcgtggcgtggaggtgctggtcaccttcgacggctggcggggtgccttcgac
tactactgccgctacgactcccgggacatcttccccgtgggctggtgctctctcaccggg
gataacctgcagccgccaggcaccaaaggtctgtgcgcgcctgtgtgtatatatgcagtg
ctacccaagaccctcggttgcctttcagacggtagcgagggaagagccatgcaccccgtg
ccaggacagccgcctggccaacggggacgcaagccaggccgcaggaaagccaagctgaca
gagctctggggccagaagggggccggagtaggaacacaagcccccctgcccagaaatgga
ctggagcatatcaaggtccccaagaagagaggccccaaaccggggagtaaggtacagacc
aaggacccggggttgggaaggttgggctgggcgaagagagcaggctggctggagggtgcc
atggcaggcccagggcaacccatgtcccggcccagagggaggctgccagccaactgggcc
cagaggatggccctgcaggagggtcaagtggagtctatcaagatccccaaaaaaagaggg
cccaagcccggcagcaagagaaaaccgcgggtggtgcccaaccccgtgcccgtctccccc
aacagcagtatgccagagccagacaccagcacggtgcccctggacaacgccaccatcccc
agcgccgccttgcatgctgcaacagtgtgtgtatacctgaacaagtatgggaaggtggga
ccccacttggacgggcggcgggtgcagcagctgcccgaccactttggtccaggccgggct
tcctcggtgctacagcagtgtgtccaggcctgtgtggactgtgcccacaaccagagctct
gtcttctcctgcctcaagccaggtcacggaggagaggtcatatcagcccactttgaccag
cagcaccataccctcaccctgcccacggtcaacagcgtcacgtacgtcctgcgcttcctg
gagaaactctgtcacaacctctactgtgaccctctgtttggcagccagcccgttccccaa
gggggcctgcattacgaaagccacgcttacccagaaaggagaagttttagggagggcctc
acgacgggtccaggcagaggctccaagcggttccttcaagactcctactacagccccctc
ccccacaagctggccaaaaacctttgcctctcctcggaaggtgaacccttcctcatggtg
aacggtgtagggggttcggggcacttaaaaaagagccccctgtccccgggctcaacaggg
cagcctctgggcctgcggtcccccaccaagttgctacatctcaactcttcaggctctgag
cgtttcagagagagcccccggcccagtggccaggaccccaacctgtggacggtgaaggac
gtcatgcagttcatcagagacatagaccccctactggccccccacgcagatctcttcaga
aaacacaatttaccacaggtggactccaatcaagttgtagaaacatcaaggaaaatcaat
ggaaacaggatgcacctgagctcaatttcgagtctcaaagcaaagggtctgaatacttat
gtaaataaggagattgatggcaaagccctcttgttactacgcagcgacatgatgatgaaa
tacatgggcttgaagctcgggcctgccctaaaactcacattccacatcgacaagctcaaa
catggacgcccaaattga
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