Oncorhynchus masou masou (cherry salmon): 135520080
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Entry
135520080 CDS
T10723
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135520080
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
135520080
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GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-Mss51
zf-CCCH
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
135520080
NCBI-ProteinID:
XP_064801475
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All DBs
Position
29:complement(57272474..57287010)
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AA seq
661 aa
AA seq
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MDQAFPSLQTPATGPFEPNTGELQLRVDFFRKLGYSPMEVRSALLKLGLSTDTNSVLGEL
VRSGASTSTSNSTIPESGDDTTGPTSHTGSSMASSRTHGPKRDRPVPLLEDRRDTDSELK
PIVIDGSNVAMSHGNKQVFSCRGIELAVIYFLDRGHSTVIVFVPSWRKEQPRPDVPITDQ
HILMELEKKKIVVFTPSRRVGGKRVVCYDDRFIVKHAYESDGVIVSNDTYRDLQGERPEW
KRCIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKKPLLPEHKRQLCPYGKKCTYGV
KCKFYHPERTHQSHSSLADELREKARFSSEKEDRNPMMSHLRGPQADPGPFPSYSLENDL
EHRLTLEHRGSLRDGPKSQVTENMLLYWDGPRSSRNQQARSPTAVGQGQMDWPSMLSPST
TTDLPYASISHECLDSGFGSYESQSQYSDVSQGHSKVFRPMQQQGFPSGSRHPGIHPERQ
AQDSPQPCRCFHLAPSSGPQQQHHSNPHLESHSQSQLRYDTYSPPLFPPNMHHYSLPCNF
QQDGVGAHHFHPHQHPQKYWSDPFHGGVPQARASCSLPPGHHPTPHGAPHSCSSYRDQQD
SWAQPPPPSAFDTEREELRKKLQAIFNPHQVDTVMEMFPHLMDAQKLAAEILNLKSQRVA
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggcctttcccagcctccagaccccagccactggtccatttgaacccaacaca
ggagagctccagctccgggtggacttcttcagaaagttgggctactcccccatggaggtt
cggtccgccctgcttaagctaggcctgagtacagacactaactctgtactgggggagctg
gtccgcagtggagccagcactagtacttctaactcaaccatccctgagagtggtgacgat
actactggccccacaagccacacaggctccagcatggcctcctctaggacccatggcccc
aagagagacagaccagtcccattactggaagacaggcgggacacagacagtgaactgaaa
cctatcgttattgacggcagcaatgtggccatgagtcatggtaacaaacaagtgttctcc
tgtaggggaattgagttggcagtgatctatttcctggatagaggtcactcaacggtcatt
gtgtttgtgccctcatggcgcaaggagcagcccaggcctgatgtccccatcacagaccaa
cacattctaatggagctagagaagaagaagatagtcgtcttcactccctcgagacgcgtc
ggtggtaaacgggtggtctgctatgacgatcgttttattgtgaagcatgcctacgagtcg
gacggcgtgatcgtgtccaacgacacctatagggacctgcagggagagcgtccggagtgg
aagcgttgtatcgaggagagactgcttatgtactctttcgtcaatgacaaattcatgccc
ccagatgacccgcttggtcgtcatggtcccagtctggagaacttccttcggaagaagcct
ctgctgccagaacacaagcgccaactctgtccttatggtaaaaagtgcacctacggcgtg
aagtgtaagttctaccaccctgagcgcactcaccaatcccactcctcgttggctgacgaa
ctcagggagaaggcaaggttctcctctgaaaaagaggaccggaatcccatgatgtcacac
ctgaggggcccccaggccgacccgggaccctttccctcctattctctggagaatgacctg
gagcacaggttgacgttagagcaccgcggttccctgagggatggtcccaagagccaggta
actgagaacatgttgctatactgggatgggccacgctccagtaggaaccagcaggcccgc
agccccacagcagtaggccaaggacagatggactggcccagtatgctctccccctccact
actactgacctcccctatgccagcatctcccatgagtgcctggactctggttttggctcc
tatgagagccaaagccagtactcggatgtgtcccaaggccacagcaaggtcttcaggccc
atgcagcagcagggcttcccatctggttccagacatccaggcatacatccagagaggcag
gcccaggacagccctcagccctgcaggtgtttccatttggctccctcctcaggtccccag
cagcagcaccacagcaacccacacctcgagtcccactcccaatcccagctgaggtatgac
acctactcgcctcctctgttcccacccaacatgcaccactatagcctcccctgcaacttc
cagcaagacggtgtgggggcacaccatttccacccccatcagcacccccagaagtactgg
tcagaccccttccatggcggggtcccccaggctagggcatcctgtagcctcccccctggc
caccaccctaccccgcatggagccccccactcatgctcctcttacagggatcagcaggac
tcctgggcccagccacctccaccttctgcctttgacacagagagagaggagctccgtaag
aaactgcaggccattttcaacccccaccaggtggatacggtcatggagatgttccctcac
ctgatggacgcccagaagctggccgcagagatcctcaacctcaaatctcagagagttgcc
ttctga
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